Heatmap: Cluster_38 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
- -0.97 -1.05 -1.32 -0.1 -1.22 -1.96 -3.16 - -6.82 - - -6.33 -2.47 0.24 -2.42 1.21 3.95 -3.26 -1.17 -6.61 -1.24 -1.35 -4.11 - -8.62 - -1.84 -6.77 -8.33 -3.05 -0.28 0.38 2.9 -2.95 0.43 - -1.52 -0.21 - - -1.57 0.18 1.45 1.22 - 1.51 1.03
0.98 -3.36 - 0.99 - - - - - - - 2.04 - - - - - - - - - - - 0.77 - 1.37 - 2.44 4.44 - - - - -2.07 - - - - - - - 2.58 - - 1.09 - - -
-4.02 1.03 - -6.55 - -6.49 -8.47 - - - - -10.09 - 1.21 -2.28 -3.21 -4.34 -1.94 -1.82 0.51 -3.1 -2.4 0.16 -0.72 -3.27 -0.49 -4.54 0.92 -5.1 -5.43 -0.09 1.11 1.44 2.12 0.59 -0.28 0.73 1.26 1.75 -8.07 - 3.33 -0.11 -0.67 1.8 0.29 - -2.2
- -1.62 - - - - - - - - - - - -3.73 -0.96 - - - - -1.62 - 1.87 2.1 -7.54 - - - - -0.13 - - 2.83 0.07 2.27 -1.19 3.19 - 1.28 -4.86 - - 3.06 1.22 -1.36 0.87 - - -
0.18 -0.96 1.11 -1.16 1.81 1.64 -0.15 -5.79 -3.71 -6.95 -7.52 - -7.54 -1.22 - -0.86 0.62 -3.63 -1.02 0.56 -3.19 -1.33 -3.06 -1.33 -1.65 -0.13 1.16 2.31 0.6 -2.69 -2.21 1.3 -0.87 -1.38 -1.03 -1.78 2.47 -2.12 0.06 2.24 -0.95 -1.42 0.96 0.59 - - -4.65 -2.86
-1.34 -2.19 0.1 0.43 2.14 1.42 -0.21 -3.35 -1.27 -4.51 -1.05 - -5.1 -0.14 - -0.9 -21.24 -1.19 -0.09 0.36 -0.75 -0.76 -0.04 -0.97 0.78 -1.82 -1.09 1.36 1.25 -0.91 -0.48 1.03 -0.69 -0.77 0.39 1.35 1.36 -0.53 -0.94 -0.19 - 1.01 -0.82 -21.65 1.55 1.42 -3.0 -1.23
-1.34 -2.19 0.1 0.43 2.14 1.42 -0.21 -3.35 -1.27 -4.51 -1.05 - -5.1 -0.14 - -0.9 -21.24 -1.19 -0.09 0.36 -0.75 -0.76 -0.04 -0.97 0.78 -1.82 -1.09 1.36 1.25 -0.91 -0.48 1.03 -0.69 -0.77 0.39 1.35 1.36 -0.53 -0.94 -0.19 - 1.01 -0.82 -21.65 1.55 1.42 -3.0 -1.23
-1.34 -2.19 0.1 0.43 2.14 1.42 -0.21 -3.35 -1.27 -4.51 -1.05 - -5.1 -0.14 - -0.9 -21.24 -1.19 -0.09 0.36 -0.75 -0.76 -0.04 -0.97 0.78 -1.82 -1.09 1.36 1.25 -0.91 -0.48 1.03 -0.69 -0.77 0.39 1.35 1.36 -0.53 -0.94 -0.19 - 1.01 -0.82 -21.65 1.55 1.42 -3.0 -1.23
AT1G26945 (KDR)
-2.98 -1.51 -7.21 - - - - - - - - - -6.7 -2.06 1.31 -1.97 3.94 3.03 -0.55 -1.58 2.14 -0.51 -0.53 -2.64 -6.27 -3.13 -6.0 -6.89 - - -1.16 -0.89 1.09 2.56 -2.12 -2.25 -4.74 0.05 -1.36 - - -4.42 0.01 -0.94 -0.99 - - -0.25
-4.4 -1.26 0.35 -0.13 -0.11 -0.83 0.24 - - -5.11 - - -2.7 -0.32 3.1 -0.89 0.56 2.94 0.78 -1.58 -3.72 1.3 -0.96 -0.15 -0.81 0.32 2.64 -3.47 - - -2.95 -1.43 1.17 -0.47 -5.67 -0.78 - -0.48 -0.1 - - -2.59 -0.93 0.67 -1.92 - - 0.02
-6.01 0.49 - -3.48 - - - - - - - - - 0.7 2.03 -0.8 1.53 2.95 -3.37 -0.98 -1.65 1.49 -0.46 1.87 -4.41 2.49 -1.23 -3.97 - - -1.42 -2.16 2.35 2.29 -6.35 1.0 - 0.86 -0.31 -4.88 - - - -4.41 - - - -4.14
-6.06 -1.06 - - - - - - - - - - - 0.61 2.15 -0.4 1.08 2.26 -1.97 1.4 0.33 1.96 1.49 1.8 - 2.86 -3.06 - -5.19 - 0.27 -2.13 1.54 0.89 -2.25 1.98 - 0.15 -1.52 - - - -2.2 -4.79 -5.38 - - -4.97
-5.68 1.36 - -4.52 - - - - - - - - - 0.71 0.82 -0.95 -0.03 1.2 -2.78 0.57 -1.48 1.83 1.32 2.23 - 2.88 -1.7 - - - -0.41 -3.25 2.21 2.36 -4.44 1.76 -3.78 1.31 0.15 - - - - - -4.51 - - -
-0.72 -0.07 -3.92 - -4.23 - -5.67 - - - - - - 0.43 2.37 -1.06 0.33 1.6 -3.97 -0.04 -0.14 1.03 -0.08 2.15 - 3.19 -1.1 - - - -0.79 -2.73 2.01 2.26 -5.3 1.9 -4.33 0.74 -0.08 - - - -3.65 - - - - -6.31
- - - - - - 2.62 - - - - - - 2.04 - - - - - - - - - - - - - - - - - - 5.03 2.07 - - - -0.24 - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - - - - 3.56 - 3.6 - - 2.58 3.72 - - 1.48 1.12 - - - - - - - - -
- -5.22 - - - - -2.51 - - - - - - - - -4.57 - 0.06 - -6.32 - - - -0.92 -2.88 -1.3 0.44 - - -5.4 - -1.5 -2.22 0.07 - 1.85 3.72 -0.76 -4.17 - - 0.26 1.38 -0.87 1.35 4.01 - 1.14
- - - - - - 3.56 2.25 0.83 -0.14 - - - - - - - - -0.35 - - - - - - - - - - - - - - 0.85 - - - -2.28 - - - 3.78 - - 3.61 - - -
- 1.59 - 3.34 - 3.07 - - - - 2.78 - - - - - - - 1.74 - - - - - - - - - - - - - - - - - - - - - - - - 4.02 - - - -
-3.66 -1.38 - - - - - - - - - 0.86 1.49 -0.91 0.22 1.64 0.62 - -1.97 -3.36 -1.98 1.3 -1.87 0.6 - 1.15 1.52 - -3.19 -2.12 -1.68 3.07 1.18 1.83 -5.74 0.74 0.87 -0.17 -0.35 - - 1.73 1.56 - - - - -1.95
-4.83 1.42 - -7.05 - - - - - - - - - 0.25 1.38 -0.06 -3.61 -3.64 -1.69 1.43 -3.13 1.04 1.1 -0.2 -5.87 0.31 -1.34 -2.84 -4.96 -6.82 -0.51 1.36 3.05 1.48 -0.77 1.6 2.3 1.11 2.0 -0.97 -1.12 -6.05 -3.79 - -2.31 - - -4.8
- -0.68 - - - - - - - - - - - 2.25 - - - - - 2.73 - - - -1.36 - -1.38 - - 1.92 - - - 2.48 2.37 2.71 - 0.81 0.29 -0.47 - - - - - 3.38 - - -
- - - 3.08 - - 2.33 - - - - - - - - 0.42 - - - - - - - 1.51 - 1.69 1.32 - 4.38 - -1.0 0.44 0.38 - - - - -0.57 - - - - - - - - - -
- 0.37 - - - - - - - - - - - - - - - - - - - - 4.21 - - - - - - - - - - - - - - - - - - - - 4.82 - - - -
-4.4 -2.91 - - - - - - - - - - - 0.55 - 0.93 1.79 1.49 - -0.69 2.71 - - -1.64 - - - - - - - -0.83 - 2.98 - - - -2.6 -3.68 - - 3.94 2.44 - - - - 0.29
-5.13 -3.96 2.26 3.24 2.04 -1.52 2.87 - -2.38 - 0.26 -1.09 - -1.56 -0.97 - - -0.06 1.53 -3.67 -2.06 -2.39 - -2.96 - -2.05 -0.33 -1.74 -1.83 - -3.46 -1.02 -1.82 -2.64 -2.03 -1.96 -1.83 -2.13 -1.96 1.01 - 0.02 -1.88 -0.3 - 2.53 -0.48 -3.05
-4.58 -1.59 -6.51 - -5.55 - -6.42 - - -8.05 - -5.15 -4.73 -0.95 0.36 1.25 0.57 1.96 -3.9 -2.14 -1.51 0.86 -0.31 1.98 -4.06 2.9 0.26 -4.35 -5.32 -7.26 -0.8 -3.85 2.88 1.72 0.55 1.73 -0.37 0.85 1.12 -2.32 - - -4.81 - -0.28 - - -5.22
0.32 -2.85 - 0.91 0.9 - - - -0.45 0.92 1.88 - 0.81 -1.53 - - - - -0.81 -3.11 - - - -4.59 3.57 - -0.2 - 2.28 1.96 - -1.77 -1.34 - -2.09 - 3.22 -3.47 -4.12 - - - - - - - 0.45 -1.09
AT2G36870 (XTH32)
-7.42 -0.09 -7.83 -5.46 - - - - - -8.12 - -9.5 -9.33 -0.24 -1.22 -2.44 -4.95 -5.83 -4.49 -0.5 -4.16 2.41 3.25 -1.67 - -2.08 -7.08 -7.51 -1.54 -6.23 -3.8 0.53 0.89 2.27 2.36 3.2 -1.07 1.78 -1.0 -1.21 - 0.36 -2.09 - -4.54 - - -7.44
AT2G37678 (FRY1)
-1.17 -0.2 -7.28 -8.3 - -7.28 - -8.64 - -9.73 -8.43 - -6.76 0.06 2.54 0.37 1.91 1.73 -2.38 0.59 -0.27 0.66 0.56 -0.45 -1.94 -0.37 0.23 -1.29 -2.92 -3.06 -1.44 0.12 0.25 1.92 -0.08 0.71 0.15 0.48 -0.53 -1.41 -1.56 0.71 1.44 0.01 0.68 0.26 -2.6 0.03
-6.25 -0.15 -3.05 -2.43 -1.62 -2.4 -2.12 - - - - - - 1.36 1.44 -5.46 -1.52 1.31 -2.34 -1.58 - 0.93 1.03 1.31 - 1.82 -4.57 - - - -1.93 -2.94 1.94 2.49 0.94 3.24 - 2.06 -0.41 - - - -0.37 - -2.35 - - -1.8
- -2.33 - - -1.3 - - - - - - - 0.46 -1.11 1.54 - -2.9 0.94 -3.31 -3.57 -2.83 0.22 -1.07 0.56 - 0.32 - - -2.35 - -2.86 - 2.3 3.68 -1.63 3.57 - 1.64 -1.51 0.5 - -1.7 -1.63 - - - - -3.7
- -1.11 - -3.12 -3.3 -3.68 -3.57 - - - - - 0.22 -0.13 1.04 -3.33 0.41 3.03 -3.94 -3.65 -1.75 0.34 -0.17 1.6 - 1.62 - - - - -1.22 -3.3 2.07 3.11 -1.22 2.73 - 1.72 -0.89 - - - -2.13 - - - -7.32 -1.97
- -0.45 - - - - -3.41 - - - - - - 0.33 1.66 -1.66 -0.46 2.43 - -1.4 -0.37 0.73 -0.29 2.1 - 2.62 - - - - -0.96 -3.17 2.14 3.17 -5.4 2.21 - 1.66 -1.36 - - - - - - - - -4.63
AT3G22840 (ELIP)
-1.61 1.49 -5.43 - -5.27 -5.35 -6.1 -4.52 -8.56 -9.29 -10.27 - -3.17 -2.87 0.9 -1.16 2.96 -0.22 0.93 -1.65 1.94 -3.84 -2.95 -1.35 -2.46 -1.95 -1.21 -5.86 -5.14 -1.33 -1.18 2.71 -3.24 1.0 -4.59 -4.73 -4.05 -0.67 -3.52 -2.59 0.37 1.54 1.71 -1.38 -7.55 0.6 2.35 -0.1
- - 2.34 - - - - - 2.48 1.3 - - 3.7 - - - - - - - - - - - - - - - 1.4 - - 2.2 - - - - - 0.49 - - - - - - - - - 3.72
-4.3 -1.54 - - - - - - -4.17 - - - - - -0.96 -2.15 -2.53 - -2.48 -0.23 1.07 -3.59 -2.74 -0.52 - -0.03 -1.55 -1.69 -4.07 -6.69 -4.44 2.57 1.52 2.3 -3.23 - -3.89 -1.67 2.44 - - 3.58 -4.43 -4.16 3.19 - - -
-8.43 -3.46 -5.39 -0.86 - - -0.79 - -4.12 - -5.31 - - -1.96 -2.87 0.12 -7.34 -6.58 -4.39 -1.87 - -2.75 -2.98 -2.32 - -2.44 - - -3.17 -9.12 -5.23 -3.63 -0.84 2.66 -2.77 -4.09 - -2.38 - - - 2.36 1.04 - 4.88 - - -3.87
- -0.75 - - - - - - - - - - - - - - - - - - - - - - - - - - - - 0.18 0.86 - 3.8 - - - - - - - 3.55 3.64 - 2.65 - - -
- - - - - - - - 4.94 - 4.0 - - - - - - - - - - - - - - - - - 0.51 - - - - - - - - - - - - - - - - - - -
- - - - - - -3.68 - - - - -2.43 -3.86 - - - - - - - - - - -0.5 - -0.49 - - 1.95 - - 2.57 -2.16 -1.73 -3.78 1.48 - -0.87 - - - 4.11 2.71 - 3.09 - - -2.87
AT3G49700 (ETO3)
- -4.67 - -1.12 - - - - - - - - - - - - -3.64 - -5.38 -4.58 - - - -5.71 - - -3.56 - -4.86 -5.29 - 3.87 -4.39 0.98 - -0.43 1.05 -4.2 - - - 3.29 2.07 -1.18 3.73 - - -4.57
- - - - - - - - -1.7 - -1.94 -2.24 -2.07 -3.12 - - -1.57 - -0.14 - - - - -0.02 - -1.86 -0.36 - 3.17 -1.54 - 2.01 -0.6 1.83 - -1.36 - 1.33 -5.12 - - 1.63 - - 4.31 - - -2.46
- -0.3 - - - - - - - - - - - - 2.63 - - - - -0.31 - - - - - -0.57 - 1.67 3.26 - 0.69 0.91 1.61 3.58 - - - -1.76 -2.08 1.59 - - - 2.23 - - - -
- -2.88 - - - - - - - - - - - -0.58 - - 0.69 - - - - - - -1.12 - - - 1.0 3.5 - -0.49 0.19 2.47 4.17 - - 1.0 -0.57 - - - 1.89 - - - - - -
- - - - 4.81 - 4.32 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -1.67 - - - - - - - - - -2.86 - - - - - - - - - - - - - - - - - - - - 0.51 5.53 - - - - - - - - - - - - - -
-3.26 - - - - -2.38 -2.06 - - - - - - - - - - - - - - - - - - - - - 1.05 - - -0.46 -3.5 -0.01 - - - -5.44 - - - 4.33 1.88 -1.42 4.18 - - 0.33
AT4G14690 (ELIP2)
-1.07 0.13 -9.16 -5.96 -6.88 - -6.16 -6.99 - -9.57 - - - -3.48 1.03 -2.52 -0.24 -4.18 -5.68 -2.64 -3.9 -5.07 -4.24 0.8 -4.26 -0.53 -1.32 4.12 1.48 -7.72 -1.39 2.55 -1.59 2.22 -4.88 -4.05 -4.79 -0.33 -2.51 0.28 -3.33 -0.38 -0.48 -2.2 -6.06 - 0.71 1.48
- -4.13 - - 3.82 4.72 - 1.19 -0.62 -0.2 0.42 - - - - - - -0.61 - -3.33 - - - - - - - - -0.67 - -2.9 - - - - - -0.46 -2.58 - - - - - - - - - -
- -3.19 - - -0.3 -0.18 - - - - - - 5.52 - - - - - - - - - - - - - - - - - - - -2.76 -2.46 - - - -3.41 -29.27 - - - - - - - - -
- -4.56 - 0.72 - - 1.35 -1.38 - - 0.09 - 3.85 - - - - - - -4.34 - -0.81 - - - - - - -2.28 - - -2.51 - -3.1 - - - -5.4 - - - 4.31 2.8 - - - - -
- 1.61 - -1.84 - - - - - - - - - 1.54 0.47 -1.58 -1.06 - -0.4 0.92 - 1.53 1.97 -0.22 -0.73 -0.93 - - -4.27 -0.65 -1.18 0.3 3.38 -0.22 1.7 1.33 - 1.57 1.67 1.35 - - - - - - - -
-6.81 -7.22 - - - - - - - - - - - -5.39 - - -5.78 -3.89 - - - -3.03 - -5.67 - - - - - - - 0.66 -0.84 1.75 - -2.84 - -4.81 -4.81 - - 3.58 4.77 - 0.65 - - 0.38
-4.89 -0.04 - - - - - - - - - - - -1.06 0.64 -2.45 1.34 3.27 -2.57 -1.31 - 0.53 1.42 -1.64 - -0.3 - - - - -1.2 -3.95 2.3 3.71 -1.17 2.02 - 1.34 0.35 - - - - - - - - -
-3.76 -0.73 - -2.0 -2.59 - - - - - - - - -0.91 -1.92 - - -2.58 - -1.62 - 1.71 1.49 1.86 - 2.84 - - -5.16 - - - 2.13 3.29 -1.28 3.02 - 2.44 -0.96 - - - - - -3.62 - - -
-4.83 1.36 - -4.66 - - - - -7.01 - - - -6.53 1.12 0.3 -0.25 -1.26 0.45 -3.37 1.2 1.83 1.9 0.5 2.38 -5.4 2.98 -1.97 -3.39 -5.95 - 1.93 0.06 1.46 -0.08 -0.71 1.09 -3.31 0.61 0.3 -1.12 - -5.68 -6.59 - -4.59 - - -6.81
-2.36 -0.39 - - -7.36 -6.73 - -7.29 - - - -3.72 - -1.55 -0.33 -1.41 -1.75 -1.93 -3.55 0.19 1.2 -1.35 -1.16 -2.44 -6.43 -3.01 -4.06 1.92 -5.15 -9.09 -0.84 -0.75 1.99 -0.39 1.16 -1.28 -3.88 -0.63 1.95 -3.53 -1.43 0.75 1.94 -0.99 0.83 3.81 - -0.19
-2.44 -0.7 - - - - - - - - - -6.27 - -2.4 -0.18 -1.04 2.84 4.08 -3.66 -1.76 - 0.74 -1.91 0.44 - 1.14 - - - - -1.97 -5.89 0.89 3.31 -5.44 1.24 - 0.05 -1.76 - - - - - - - - -
-3.77 0.49 - -4.11 - - - - - - - - - 0.73 -0.54 -1.57 -0.62 2.32 - -1.2 0.48 1.72 -0.46 2.07 - 2.84 - - - - -0.73 -2.71 2.45 3.3 -4.03 1.02 - 1.02 -0.41 - - - - - - - - -
-7.23 0.72 - - -3.95 - -4.99 - - - -4.67 -4.65 - 1.1 -0.21 -2.2 0.18 1.61 -5.26 -0.76 0.96 1.3 0.79 2.22 - 2.97 - -2.92 - - -1.13 -3.73 1.99 3.21 -4.4 1.39 - 0.77 -0.12 - - - -2.94 - -2.95 - - -3.72
- -0.1 - - - - - - - -5.76 - -6.66 - 0.59 -1.76 -5.66 1.17 3.65 -4.99 -1.49 0.1 2.08 0.46 1.3 - 1.76 - - - - -3.73 -3.33 1.4 3.36 -7.31 0.04 - 0.43 1.03 - - - - - - - - -
- 0.08 -1.57 -4.02 - -4.47 - - - - - - - 0.38 -0.34 -0.59 0.52 2.0 -5.23 -1.07 -0.47 1.67 1.07 1.81 - 2.71 - - -3.26 - -2.52 -3.61 1.64 3.59 -3.24 1.45 -3.88 0.65 0.79 - - - - - - - - -
-3.03 -0.69 -2.3 -1.81 -3.72 -4.32 -3.2 - -2.78 -6.36 - -5.25 -2.22 -0.35 0.41 -0.81 1.56 3.34 -1.25 -1.57 0.65 0.97 -1.1 1.98 - 2.73 - - - -6.59 -1.28 -2.73 1.48 2.42 -4.79 1.63 -2.12 0.9 -0.07 - - - -3.21 - - - - -
- -0.06 - - - - - - - - - - - -2.98 -0.89 -3.5 -2.75 -1.53 -1.65 -1.97 -3.46 -3.16 -4.06 -2.46 -1.32 -2.71 1.98 -3.93 -3.28 -3.24 -3.93 1.97 -0.35 1.5 -0.09 -3.23 -3.01 -0.79 -2.23 -4.85 - 1.89 1.42 3.31 2.13 - 2.4 2.16
- - - - - - - - - - - - 4.43 - - - - - - - - - 4.2 - - - - - - - - 1.94 - 2.08 - - - - - - - - - - - - - -
-5.26 -1.55 -7.07 -2.87 - - -2.07 - - -7.94 - - - 1.65 -0.39 1.13 -5.79 -5.91 0.12 -0.57 -4.78 2.05 -1.82 1.93 - 1.89 -6.47 1.61 -1.35 - -2.84 0.91 3.99 -0.17 -0.17 -0.46 -5.77 0.13 -1.84 1.11 - - - - - - - -
AT5G60860 (RABA1f)
-0.36 -1.5 -1.83 -1.42 -0.33 0.62 -0.82 1.72 1.95 1.04 1.47 -7.2 1.22 -1.59 1.19 -0.37 1.87 0.98 1.12 -1.44 -0.36 -1.53 -1.79 0.44 -3.75 0.6 -1.08 -2.03 -0.63 -6.2 -2.01 -1.64 -0.22 -0.22 -2.47 1.05 -0.83 -0.23 1.29 -3.05 -2.12 -0.64 0.32 -2.31 -1.31 -4.16 -4.48 -1.44

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.