Heatmap: Cluster_320 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g102350.3.1 (Solyc01g102350.3)
0.97 -0.03 1.56 2.09 0.08 0.6 0.35 0.99 0.84 0.01 -0.83 -1.24 -2.46 -1.58 0.07 -0.05 -0.01 -7.98 -8.07 -2.43 0.83 -2.08 -0.46 -0.75 -1.01 -0.67 -1.16 -1.09 -1.19 -1.48 -1.08 -1.92 -0.09 1.42
Solyc02g063350.1.1 (Solyc02g063350.1)
-1.11 1.69 2.29 2.45 1.6 0.17 -6.56 -0.03 0.86 -0.57 -2.26 -1.96 -2.46 -0.53 -0.3 0.57 0.39 -3.59 -3.47 -1.79 -2.75 -2.93 -1.99 -1.91 -3.08 -5.84 -1.7 -1.42 -1.06 -2.56 -2.55 -2.38 0.52 1.51
Solyc02g093640.3.1 (Solyc02g093640.3)
-0.69 -0.28 0.08 1.41 0.68 0.34 -0.65 0.05 0.49 -0.14 -0.48 -1.0 -1.16 -0.61 0.76 0.21 0.24 -7.28 -7.68 -0.79 -1.0 -0.33 0.1 0.18 -0.15 0.72 0.34 -0.04 -0.35 -0.24 -0.01 -0.59 1.0 0.57
Solyc06g066650.3.1 (Solyc06g066650.3)
-0.37 -5.43 2.78 1.67 0.37 0.78 -3.05 -0.45 -0.15 0.72 -1.67 0.01 -2.29 -0.8 0.98 0.82 0.96 1.52 1.25 -5.62 -3.88 -2.87 -1.98 -2.34 -3.04 -3.64 -2.19 -2.95 -2.72 -2.15 -2.08 -2.47 -1.76 0.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.