Heatmap: Cluster_359 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc04g080230.3.1 (Solyc04g080230.3)
-0.59 -1.36 -0.61 -0.54 -0.99 -0.8 -1.3 -0.95 0.52 0.02 -0.33 -0.25 -0.57 -0.41 1.75 2.18 1.67 -11.66 -11.52 -0.84 0.15 0.17 0.16 0.43 0.4 -1.75 -0.59 -0.33 -0.17 -0.25 -0.22 0.19 -2.22 -0.46
Solyc08g077480.3.1 (Solyc08g077480.3)
-1.6 -2.1 -2.24 -2.82 -2.1 -0.79 -3.21 -1.17 -0.8 0.11 0.28 -0.68 -0.39 -0.25 2.35 2.31 1.98 -11.28 -10.77 -1.44 -1.57 0.21 -0.07 0.1 0.37 -2.51 -0.21 -0.19 0.17 0.16 0.03 0.6 -3.14 -0.73
Solyc08g080160.3.1 (Solyc08g080160.3)
-1.84 -0.72 -3.82 -0.19 -3.29 -2.18 -3.13 -2.25 -0.2 -1.19 1.28 -0.15 -3.27 -4.63 1.97 2.47 2.27 -3.75 -3.41 -7.48 -1.26 0.64 0.86 0.14 -0.26 - -0.39 -0.28 -1.05 0.17 0.61 0.39 -2.99 -1.33

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.