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Heatmap: Cluster_3 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Gametophyte
Male Gametophyte
Hermaphrodite Gametophyte
Gametophyte; Antheridiogen added at D-3
Sporophyte
Seedling, sporophyte
Seedling, 24h of 2\,4-D treatment
Seedling, 48h of 2\,4-D treatment
Whole plant
Whole plant, 2\,4-D Auxin
Callus
Differentiating Callus
Proliferating Callus
Bulbil
Leaf
Leaf (without leaf tip)
Leaf Tip
Root
Root (without root tip)
Root Tip
Differentiated root
Shoot Apex
Shoot
Shoot Tip
Vegetative Frond
Frond
Ceric.01G037200.1 (Ceric.01G037200)
 3.06 - - 4.13 - - - - - - - - - - -3.16 - - - - - - - - - - -
Ceric.01G046500.1 (CYP704B1)
 -1.47 0.24 -2.2 4.13 - - - - 0.01 - - - - - -1.11 - - - -0.2 -3.35 2.09 - - - - -4.12
Ceric.01G048000.1 (CYP704B1)
 0.9 - -1.12 3.9 - -0.4 1.43 - 0.62 - - - - - -1.71 - - 0.69 -7.76 -5.83 0.59 - - - - -1.51
Ceric.01G073500.1 (Ceric.01G073500)
 - - - 3.73 - - - - - - - 3.67 - - - - - - - - - - - - - -
Ceric.01G086000.1 (Ceric.01G086000)
 -14.15 - 0.26 4.5 - - - - - - - - - - -0.32 - - - - - 0.24 - - - - -2.84
Ceric.01G131100.1 (Ceric.01G131100)
 - - - 4.7 - - - - - - - - - - - - - - - - - - - - - -
Ceric.02G045800.1 (Ceric.02G045800)
 - - 1.67 3.48 - - - - - - - 3.39 - - -1.58 - - - - - - - - - - -0.33
Ceric.02G073200.1 (Ceric.02G073200)
 - - - 4.7 - - - - - - - - - - - - - - - - - - - - - -
Ceric.03G081200.1 (Ceric.03G081200)
 - - - 3.55 - - - - - - - - - - 0.76 - - - - - - - - - 3.56 -0.31
Ceric.05G003200.1 (Ceric.05G003200)
 1.78 -0.11 -1.91 4.04 - - 0.5 -1.71 - - - - -1.56 - -3.93 - -0.11 - - - - - -3.34 -1.51 0.48 -
Ceric.05G010900.1 (Ceric.05G010900)
 - - - 4.7 - - - - - - - - - - - - - - - - - - - - - -
Ceric.08G063800.1 (Ceric.08G063800)
 - - - 4.43 - - 0.25 -0.6 -12.91 - - - - - -4.35 0.62 - - - - -1.24 - - - - -0.89
Ceric.09G030400.1 (Ceric.09G030400)
 2.58 - -1.06 4.07 - - - -2.5 -1.94 -1.69 - 0.12 -1.85 - -2.56 - - - - -3.2 - - - -1.6 - -
Ceric.09G056900.1 (Ceric.09G056900)
 - - - 4.25 - - - - - - - - - - - 2.61 - - - - - - - - - -0.28
Ceric.09G060000.1 (Ceric.09G060000)
 - - - 4.7 - - - - - - - - - - - - - - - - - - - - - -
Ceric.11G031200.1 (Ceric.11G031200)
 - - 2.75 4.27 - - - - - - - - - - - - - - - - - - - - - -
Ceric.12G006900.1 (Ceric.12G006900)
 3.67 - - 3.69 - - - - - - - - - - -1.6 - - - - - - - - - - -
Ceric.13G091900.1 (Ceric.13G091900)
 0.39 - 0.08 1.98 - -6.3 - - 1.41 1.43 1.36 3.05 0.27 - -1.22 - - - - -1.09 - - - - - 0.44
Ceric.14G023200.1 (Ceric.14G023200)
 - - - 3.76 - - - - - 2.24 - 1.66 2.04 - -3.7 - - - - - - - - - - -1.36
Ceric.15G071500.1 (Ceric.15G071500)
 2.78 -1.1 0.34 3.3 - -0.06 - -1.05 - - - - -0.83 - -2.91 -1.62 - - - - -0.19 - -1.41 -0.52 1.48 -1.74
Ceric.16G023400.1 (Ceric.16G023400)
 - - - 4.69 - - - - - - - - - - -3.22 - - - - - - - - - - -
Ceric.18G008300.1 (Ceric.18G008300)
 1.84 - 0.24 3.98 - - - - 1.59 - - - - - -3.53 - 0.3 - - -10.32 - - - - - 0.11
1.46 - - 4.26 - - - - -0.39 - - - - - -4.27 - - 1.01 - - - - - - - 0.39
Ceric.18G070600.1 (Ceric.18G070600)
 - - - 4.7 - - - - - - - - - - - - - - - - - - - - - -
Ceric.1Z050900.1 (Ceric.1Z050900)
 - - - 4.39 - - - - - - - - - - -0.05 - 2.01 - - - - - - - - -
Ceric.1Z122400.1 (Ceric.1Z122400)
 - 0.87 -1.72 3.48 - 0.89 - - - -21.24 - - - - -1.09 - 0.91 - 2.92 -0.36 -22.26 - - -20.37 - -2.5
Ceric.1Z156500.1 (Ceric.1Z156500)
 -16.08 - - 4.68 - - - - - - - - - - -1.55 - - - - - - - - - - -
Ceric.1Z180100.1 (Ceric.1Z180100)
 2.75 - - 3.12 - - - - - 1.46 2.19 - 1.7 - -4.6 - - - - - - - - - - -
Ceric.1Z183800.1 (Ceric.1Z183800)
 -0.77 - -1.37 1.97 - -1.36 0.26 - - -1.76 - - -0.71 3.08 -1.54 - -0.8 -2.99 0.2 -2.86 - - - 0.18 2.68 -1.91
Ceric.1Z195300.1 (Ceric.1Z195300)
 3.55 - - 3.83 - - - - - - - - - - -5.12 - - - - - - - - - - -
Ceric.1Z199700.1 (Ceric.1Z199700)
 - - - 3.26 - - - - - - - 3.45 - - -1.24 - - - - 1.82 - - - - - 0.56
Ceric.1Z269100.1 (Ceric.1Z269100)
 - - - 4.51 - - - - - - - - - 1.52 -1.43 - - -16.33 - - - - - - - -29.05
Ceric.1Z273800.1 (Ceric.1Z273800)
 - 0.87 -1.72 3.48 - 0.89 - - - -21.24 - - - - -1.09 - 0.91 - 2.92 -0.36 -22.26 - - -20.37 - -2.5
Ceric.1Z312500.1 (Ceric.1Z312500)
 - 0.87 -1.72 3.48 - 0.89 - - - -21.24 - - - - -1.09 - 0.91 - 2.92 -0.36 -22.26 - - -20.37 - -2.5
Ceric.1Z315800.1 (Ceric.1Z315800)
 - 0.87 -1.72 3.48 - 0.89 - - - -21.24 - - - - -1.09 - 0.91 - 2.92 -0.36 -22.26 - - -20.37 - -2.5
Ceric.20G002400.1 (Ceric.20G002400)
 3.08 - - 3.74 1.64 - - - - - - - - - - - 0.05 - - - - - - - - -5.6
Ceric.20G082300.1 (Ceric.20G082300)
 - - - 2.4 - - - - - - - - - - -1.17 1.91 - - - - - - - - 4.05 -
Ceric.21G039300.1 (Ceric.21G039300)
 - - - 4.7 - - - - - - - - - - - - - - - - - - - - - -
Ceric.23G013700.1 (Ceric.23G013700)
 -14.11 - - 4.01 - - - - - 1.55 - - -0.62 - -0.98 - - 2.54 - - - - - - - -
Ceric.23G038300.1 (Ceric.23G038300)
 - - - 4.7 - - - - - - - - - - - - - - - - - - - - - -
Ceric.25G004600.1 (Ceric.25G004600)
 2.77 - -3.17 3.23 - - - -1.61 -2.06 - - 0.89 0.2 - -2.92 - -1.04 -1.66 - -0.16 -1.77 - - 1.09 0.92 -
Ceric.25G027700.1 (Ceric.25G027700)
 3.27 -0.61 -2.2 3.94 - - - - - - - - - - -3.55 - - - - - - - - - - -
Ceric.25G028100.1 (Ceric.25G028100)
 - 1.19 -0.38 4.46 - - - - - - - - - - -3.98 - - - - - -0.32 - - - - -
Ceric.25G028200.1 (Ceric.25G028200)
 - -0.2 -1.77 4.61 - - - - - - - - - - -3.52 - - - - - -1.71 - - - - -
Ceric.26G031800.1 (Ceric.26G031800)
 - - - 2.77 - - - - - 1.42 - - - - -1.27 1.26 - - - - - - - - 3.78 -
Ceric.27G038900.1 (Ceric.27G038900)
 0.17 0.21 -0.95 2.49 - 1.1 - - - 2.31 1.4 1.21 - - -1.69 - - - - -0.51 -0.64 - - - 1.88 -2.01
Ceric.27G048000.1 (Ceric.27G048000)
 - - - 4.51 - - - - 1.45 - - - - - -2.61 - - - - - - - - - - -1.99
Ceric.28G061900.1 (Ceric.28G061900)
 -0.54 - -1.43 4.39 - -0.14 - - - - 0.99 - -0.49 - -2.16 - - - - - - - - - - -2.22
- - - 4.59 - - - - - - - - - - - - - - - - - - - - - 0.91
0.33 - - 3.16 - - - - 2.47 2.34 - - - - -0.18 - - - - - 1.58 - 0.41 - - -
Ceric.31G025800.1 (Ceric.31G025800)
 -1.75 1.62 0.49 3.73 -0.5 -1.66 -0.62 -0.71 -1.16 -2.03 - - 0.18 - -3.04 -2.24 0.13 - - -0.1 -0.78 - - -1.12 - -1.29
Ceric.33G034600.1 (Ceric.33G034600)
 - - - 4.7 - - - - - - - - - - - - - - - - - - - - - -
2.52 - - 4.22 - - - - - - - -0.74 -0.7 - -6.07 - - - - -1.24 - - - - - -
- - - 4.11 - - - - - - - - 2.96 - - - - - - - - - - - - -0.01

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.