Heatmap: Cluster_478 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g094680.3.1 (Solyc01g094680.3)
-0.32 -0.79 -0.3 0.02 -0.88 -0.05 1.01 -0.48 0.86 0.51 0.08 -0.04 0.33 0.25 0.39 0.21 0.3 -10.01 -11.58 -0.94 -0.63 0.37 0.65 0.41 -0.03 -0.22 0.28 0.12 -0.09 0.13 0.49 -0.11 -1.57 -0.12
Solyc05g012290.3.1 (Solyc05g012290.3)
-0.4 -0.33 -0.02 0.54 -0.55 -0.33 0.79 -0.34 0.51 0.36 0.46 0.38 0.21 -0.04 0.27 -0.17 -0.13 -4.61 -3.15 -1.63 0.16 0.55 0.79 0.68 0.51 -0.47 -0.46 -0.28 -0.18 -0.03 0.35 0.39 -2.58 -0.29

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.