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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Immature female cone | Immature male cones | Cambium and expanding xylem | Cambium | Expanding xylem | Expanding and mature xylem | Maturing xylem | Wood | Bark | Bark, healthy | S1 xylem tracheids | S1 whole sections | S2 ray cells | S2 xylem tracheids | S2 whole sections | Dead late wood | Phloem and cambium | Dear early and late wood | Bark, root and butt rot | Vegetative shoots - needles | Vegetative shoots - stem | Vegetative shoots | Girdled twig - stem | Dried twig - needles | Girdled twig - needles | Needles | Needles - dawn | Needles - later afternoon | Needles - midday | Needles - night | Light, 1 hour | Light, 3 hours | Light, 5 hours | Light, 7 hours | Light, 9 hours | Light, 13 hours | Light, 15 hours | Darkness, 1 hour | Darkness, 3 hours | Darkness, 5 hours | Darkness, 7 hours | Darkness, 11 hours | Vegetative buds | Female buds | Male buds | Buds | Pineapple galls | Somatic germinants - abnormal type | Somatic germinants - normal type | Cell culture - H20 - 5 days | Cell culture - KI added - 5 days | Cell culture - KI added - 20 days | Cell culture - KI removed - 4 days | Cell culture - KI removed - 12 days | Cell culture - solid medium | Somatic embryogenic cell line |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -4.37 | -2.55 | -2.02 | -2.11 | -2.31 | -4.14 | -2.78 | 0.24 | -0.02 | 1.22 | -2.31 | -2.68 | -2.43 | -3.18 | -3.51 | -1.66 | - | -1.2 | 1.23 | 1.23 | 1.73 | -0.38 | 0.53 | -0.12 | -1.41 | -0.89 | 0.91 | 0.38 | 0.07 | 0.36 | 1.05 | 1.34 | 0.77 | 0.97 | 1.04 | 1.06 | 1.44 | 0.67 | 1.15 | -0.02 | 0.5 | 0.6 | -1.96 | -3.36 | -2.55 | 0.57 | -0.28 | -0.75 | -0.11 | -2.75 | -2.6 | -2.6 | -0.68 | 1.28 | -2.79 | -1.13 | |
| -2.24 | -0.76 | - | - | - | - | - | -0.26 | -0.13 | 1.73 | -3.23 | - | - | - | -3.4 | - | - | - | 2.03 | 1.89 | 1.14 | -0.51 | -1.14 | -2.26 | 0.38 | -0.89 | 0.29 | 2.13 | 0.2 | 2.08 | 0.36 | 1.38 | 0.82 | 0.58 | 1.04 | 0.32 | 0.71 | 0.09 | 0.56 | 0.78 | -0.1 | 1.22 | - | -3.97 | - | 0.25 | -1.05 | -1.1 | -1.27 | - | -2.13 | -2.44 | -1.0 | 1.18 | -7.51 | -1.46 | |
| -2.09 | - | - | - | - | - | - | 1.36 | -0.02 | 1.69 | - | - | - | - | - | - | - | - | 1.58 | 2.09 | 0.42 | -1.83 | 0.01 | -0.11 | -2.16 | -0.61 | -0.0 | 1.48 | 1.34 | 1.74 | 1.46 | 1.3 | 1.03 | -0.29 | 0.87 | 0.74 | 0.23 | 0.14 | 0.11 | -1.26 | -0.38 | 0.89 | -1.64 | -4.35 | -2.48 | 1.14 | - | -1.19 | -1.01 | -3.41 | -1.92 | -0.69 | 0.32 | 1.76 | - | -1.4 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.