Heatmap: Cluster_238 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g011510.3.1 (Solyc01g011510.3)
-2.48 -7.83 -1.0 -4.02 -0.14 1.02 -5.0 1.66 1.39 1.74 -1.31 -2.86 -1.23 -2.39 0.52 1.37 1.54 -9.53 -11.61 -1.17 -3.04 -0.03 1.19 0.89 0.36 0.77 -0.78 -0.87 -1.44 -1.27 -0.82 -2.25 0.33 -1.09
Solyc01g081210.3.1 (Solyc01g081210.3)
1.63 0.91 1.23 1.93 1.03 1.86 0.0 -0.12 2.02 0.14 -0.78 -1.07 -4.39 -4.49 -1.3 -2.06 -1.06 - -3.83 -3.72 -3.79 -2.9 -0.5 -1.75 -3.89 -1.17 -2.9 -4.16 -6.65 -3.48 -1.9 -4.57 0.39 2.02
Solyc01g091050.3.1 (Solyc01g091050.3)
-4.01 - -6.69 - 1.54 1.91 -5.66 0.07 1.42 0.46 3.41 0.01 -0.95 -1.05 0.36 -4.91 1.64 - - - -6.47 -8.08 - -4.11 -5.35 -8.53 - -7.23 -3.86 -8.69 -6.32 -4.27 1.47 1.06
Solyc01g111145.1.1 (Solyc01g111145.1)
1.18 -9.68 -8.26 -10.3 1.25 0.79 -6.24 1.04 -0.61 -0.56 -5.39 -6.09 -8.41 -6.41 -1.4 -1.43 -1.42 -11.51 -11.45 -8.0 -0.25 0.61 -2.08 1.27 1.55 -7.53 0.27 1.65 1.33 1.15 0.51 0.41 1.24 -0.15
Solyc02g024060.2.1 (Solyc02g024060.2)
-2.31 - - - 2.03 2.18 -2.3 2.61 1.71 1.84 0.34 -0.98 -5.41 -4.33 -0.69 -0.46 -0.34 -7.24 - -7.96 -5.67 -1.42 -0.8 -1.58 -2.6 - -1.06 -0.3 -0.73 -2.0 -1.5 -3.45 1.96 -4.23
Solyc02g024065.1.1 (Solyc02g024065.1)
-1.78 -9.02 -7.12 -5.65 3.42 2.24 -1.19 1.94 1.17 0.9 0.65 -0.53 -4.01 -3.53 -1.26 -0.9 -0.81 -8.62 -7.86 -4.52 -2.71 -2.12 -1.28 -2.01 -2.54 -4.53 -1.95 -1.18 -1.49 -1.95 -1.93 -3.78 1.47 -2.4
Solyc02g064770.3.1 (Solyc02g064770.3)
-2.33 -2.21 -6.69 -5.04 1.64 2.66 0.54 1.99 2.02 1.63 -2.83 -1.84 -3.96 -4.57 0.51 -0.24 -0.09 -9.76 -9.1 -2.66 -3.63 -1.38 -0.97 -0.74 -1.7 -2.83 -2.75 -3.65 -3.32 -4.59 -2.01 -6.69 2.29 -3.43
Solyc02g085870.3.1 (Solyc02g085870.3)
-2.58 -9.33 -4.89 -6.35 1.17 1.44 -1.57 0.68 1.11 -0.07 -2.58 -2.41 -6.28 -6.66 0.36 0.02 0.66 - -11.93 0.5 -0.07 -1.45 -1.69 0.75 0.68 2.95 -6.7 -5.48 -4.83 -4.91 -2.15 -6.24 2.3 -2.35
Solyc02g091920.3.1 (Solyc02g091920.3)
-6.65 -10.63 - -12.11 1.8 0.83 -2.9 1.5 0.56 -3.27 -5.8 -2.75 -11.16 -9.08 -2.59 -3.38 -4.46 - - -8.27 -1.38 0.88 0.82 1.79 2.12 -7.01 -1.66 -0.78 -0.51 -0.78 -0.3 -1.15 3.07 -4.35
Solyc03g006160.1.1 (Solyc03g006160.1)
-0.08 1.1 2.45 1.39 1.28 0.61 - -0.3 -0.61 -2.02 - - - - 0.32 0.54 0.39 - - - -5.35 -5.07 -5.6 0.79 1.8 - - -5.95 -5.32 - -4.22 - 1.77 2.12
Solyc03g044090.3.1 (Solyc03g044090.3)
0.12 -4.3 1.28 0.02 2.19 1.67 -0.04 1.0 0.43 0.61 -0.1 -0.2 -0.37 0.19 -0.33 0.15 -0.81 - - -3.8 -1.85 -0.45 -1.12 -1.15 -1.28 -2.42 -0.6 -0.64 -0.81 -0.09 -0.19 0.14 -0.51 0.61
Solyc03g065250.3.1 (Solyc03g065250.3)
-1.97 -10.14 -5.65 -6.12 0.51 1.58 -2.16 1.38 1.3 1.3 -0.81 -2.4 -5.02 -5.86 2.1 1.16 1.48 -10.2 -12.37 -0.52 -2.59 -2.51 -1.78 -1.31 -1.91 2.04 -1.69 -1.35 -1.68 -3.24 -3.12 -4.01 1.93 -2.51
Solyc03g078160.3.1 (Solyc03g078160.3)
0.04 -0.03 -0.47 -1.08 -0.36 0.45 0.05 -0.13 0.83 0.78 -0.5 -0.45 -1.05 -0.8 0.68 0.74 0.5 -1.82 -3.49 -2.26 -0.52 0.06 -0.48 -0.44 -0.2 -0.94 0.07 0.14 0.38 0.43 0.23 0.73 0.93 0.42
Solyc03g083770.1.1 (Solyc03g083770.1)
-5.81 - -5.9 - 3.54 2.66 - 2.29 0.23 2.29 -3.42 -2.21 -4.92 -6.08 -0.04 -4.92 -1.29 - - -9.52 -5.19 -4.46 -11.7 -5.91 -5.9 - -9.48 -5.89 -6.66 -5.14 -3.77 -4.53 1.58 -4.93
Solyc03g118830.3.1 (Solyc03g118830.3)
-0.0 -1.23 -0.32 -1.36 1.58 1.39 0.01 0.98 0.9 0.01 0.13 -0.17 0.39 0.32 0.4 0.59 0.47 -6.74 -6.72 -1.13 -1.02 -0.54 0.18 -0.27 -0.73 -1.31 0.4 -0.46 -0.78 -0.55 -0.08 -1.02 -0.36 -0.0
Solyc03g121180.3.1 (Solyc03g121180.3)
-3.91 -9.58 -7.7 -9.99 1.11 0.98 -0.74 2.12 2.35 1.29 -1.81 -1.58 -2.77 -4.14 -0.24 0.22 -0.19 - -11.12 -2.65 0.94 -2.02 -1.16 -1.34 -2.05 -0.88 -1.14 -1.18 -1.8 -2.05 -1.78 -3.01 2.95 -4.14
Solyc04g049800.3.1 (Solyc04g049800.3)
-2.36 -4.84 0.96 -1.3 3.84 1.86 0.17 1.71 -2.51 -2.1 -5.91 -9.61 -8.02 -9.46 -7.22 -8.88 -7.0 -5.66 -4.12 -2.77 -2.82 -1.66 -3.65 -2.17 -1.78 -1.75 -0.61 -0.19 -0.62 -1.37 -1.6 -1.34 0.85 0.96
Solyc04g071615.1.1 (Solyc04g071615.1)
-5.18 -10.63 -9.59 -11.72 1.73 1.79 -6.0 0.07 0.77 0.42 -5.12 -3.26 -7.86 -9.11 2.35 1.99 1.62 -10.52 -11.09 -0.18 2.54 -8.97 -10.39 -6.32 -5.55 -0.94 -10.54 -8.35 -7.44 -9.39 -9.44 -6.58 0.85 0.77
Solyc04g080750.3.1 (Solyc04g080750.3)
-0.57 -4.86 2.46 -1.51 -1.69 1.75 0.73 1.87 1.2 -0.52 -0.86 -2.1 -1.82 -3.56 1.79 1.02 0.74 - - -7.66 -2.66 -2.73 -0.08 -2.26 -3.63 -1.32 -1.68 -2.1 -2.24 -3.46 -2.31 -5.79 1.26 0.8
Solyc04g081755.1.1 (Solyc04g081755.1)
-3.23 - -1.12 -2.42 -0.15 0.9 -0.76 0.58 2.83 -0.13 -2.84 -2.82 -4.36 -5.1 1.29 0.75 0.54 - - -1.18 -0.38 -0.86 -0.65 0.63 1.1 0.06 0.5 -0.31 -1.92 -0.58 -0.44 -3.36 1.59 -1.78
Solyc05g005330.3.1 (Solyc05g005330.3)
-3.76 -6.79 -4.7 - 0.36 1.33 0.41 1.09 1.2 1.71 0.69 -0.6 0.16 -0.75 1.25 1.67 1.47 -5.82 -6.06 -0.38 -1.75 -0.9 -0.01 -0.21 -0.32 0.14 -1.48 -0.93 -1.34 -1.56 -0.91 -2.01 -0.37 -2.76
Solyc05g050550.3.1 (Solyc05g050550.3)
1.56 -7.89 -4.37 - 1.64 2.32 -3.32 1.42 2.2 -0.28 -0.76 -0.01 -2.04 -1.61 0.29 -0.03 -1.11 -7.92 - -4.64 -4.08 -0.78 0.43 -0.15 -2.03 -4.23 -2.41 -2.21 -1.25 -3.36 0.09 -2.91 0.68 1.55
Solyc05g054490.3.1 (Solyc05g054490.3)
-0.49 -0.17 0.27 0.88 -0.61 0.23 -0.43 0.44 0.78 0.07 -0.64 -0.76 -0.73 -0.88 0.79 0.49 0.56 -3.18 -3.73 -0.96 -0.98 -0.02 0.06 0.48 0.28 -0.45 -0.03 -0.12 -0.37 -0.1 0.13 -0.6 1.53 -0.25
Solyc06g068800.3.1 (Solyc06g068800.3)
-1.08 -2.54 -3.26 -3.88 1.39 -0.02 0.64 0.27 0.7 0.91 1.37 -0.77 0.47 -0.27 0.49 0.15 0.26 -6.86 -6.78 -0.39 0.67 -1.21 -2.03 -0.51 -0.02 1.23 -0.21 0.56 0.77 -0.71 -1.16 -1.12 -0.04 -0.84
Solyc06g069385.1.1 (Solyc06g069385.1)
-0.82 -7.24 -1.86 -4.22 -0.99 0.87 -1.11 0.72 0.55 1.34 -0.8 -0.51 0.8 -0.02 -0.02 0.28 0.15 -7.4 -6.55 -0.2 0.2 0.56 -0.13 0.65 0.69 -2.44 -0.7 0.02 0.1 0.38 0.34 0.74 0.83 -0.29
Solyc06g083070.3.1 (Solyc06g083070.3)
-3.52 -4.1 -0.78 0.55 2.01 0.71 -2.29 0.67 0.55 0.49 -2.79 -0.96 -6.66 -2.83 1.01 0.49 0.35 -9.25 -8.66 -5.29 -1.35 0.25 0.9 0.9 0.67 -6.59 0.97 0.68 0.33 0.19 0.15 -1.23 0.3 -1.77
Solyc06g083650.3.1 (Solyc06g083650.3)
- - - - 1.13 3.7 -6.36 2.25 1.94 1.59 -4.94 -9.25 - -8.94 -2.06 -2.91 -1.45 - - -8.43 -0.75 -2.15 -8.52 -4.2 -3.98 - - -6.11 -5.25 -4.68 -3.17 -5.13 2.39 -6.4
Solyc07g006855.1.1 (Solyc07g006855.1)
-6.85 -2.65 3.36 2.22 -0.12 0.26 -1.02 -0.08 0.01 0.88 -6.42 -3.43 - - -0.31 1.43 -0.58 -2.69 - -1.92 -6.62 -0.29 0.6 0.86 0.39 -5.45 -4.55 -3.98 -2.54 -4.0 -0.95 -6.55 0.51 -4.05
Solyc07g007800.3.1 (Solyc07g007800.3)
-0.78 - -3.22 - -0.67 0.86 -4.59 0.58 0.25 0.26 -1.25 -2.5 -5.51 -6.31 1.02 0.66 0.92 - - 0.35 0.77 -1.24 -0.36 1.08 0.92 3.01 -3.6 -2.9 -2.71 -4.35 -2.68 -4.75 1.06 0.87
Solyc07g009380.3.1 (Solyc07g009380.3)
-2.52 -7.84 -2.61 -4.55 4.24 0.76 -6.49 -0.53 -2.32 -3.2 -8.57 -5.87 -10.73 -6.2 -9.85 -8.65 -9.59 - - 0.73 -4.34 -6.16 -4.33 -4.54 -3.45 2.05 -1.95 -2.32 -2.69 -4.35 -4.2 -5.99 2.3 -2.13
Solyc07g018240.1.1 (Solyc07g018240.1)
-10.77 -8.69 -6.24 -9.63 1.26 1.55 1.4 2.64 1.54 -2.37 -1.71 -1.48 -4.03 -6.1 -1.61 -1.84 -1.83 -7.48 -12.18 - - -0.59 1.31 -0.52 -4.44 - -5.78 -5.97 -3.25 -4.45 -0.32 -11.83 3.34 -7.46
Solyc07g043630.2.1 (Solyc07g043630.2)
- -5.33 -4.83 - 2.97 -1.66 -2.17 -2.26 0.78 2.61 -2.79 -5.84 1.84 0.99 -5.45 - -4.78 - - -2.86 -5.3 -2.56 -2.82 -2.98 -2.24 0.09 -4.4 -1.59 -1.37 -2.22 -3.76 -2.65 3.1 -3.51
Solyc07g052950.3.1 (Solyc07g052950.3)
0.42 -0.46 0.86 1.41 -0.1 2.13 -2.51 0.28 1.4 -2.06 -2.23 -2.41 -1.44 -1.83 -2.73 -2.84 -2.85 - -5.52 -3.43 -2.34 -3.69 -3.9 -4.1 -4.84 -2.48 -3.42 -3.17 -3.25 -4.42 -4.36 -4.22 3.49 2.0
Solyc07g054580.3.1 (Solyc07g054580.3)
-5.23 - - - -2.71 3.23 -3.23 3.39 1.78 1.02 -3.2 -5.86 -0.85 -1.6 -4.38 - -3.92 - - -7.78 - -2.03 -0.97 -2.04 -3.26 - -0.31 -2.03 -4.5 -1.83 -1.5 -5.44 2.13 -5.0
Solyc08g079280.3.1 (Solyc08g079280.3)
-1.62 -5.38 -2.86 -5.32 0.93 1.27 -0.62 0.61 -0.01 1.94 -1.54 -1.0 -0.06 -0.92 -0.59 -0.31 -0.44 - -6.38 -1.63 -0.77 0.04 -0.13 0.54 0.61 -1.5 0.72 1.0 1.06 -0.02 -0.16 -0.31 1.19 -0.43
Solyc08g080360.3.1 (Solyc08g080360.3)
-0.2 -1.42 -1.36 -0.82 -0.48 0.37 -0.77 -0.03 -0.27 1.11 0.03 0.72 0.23 0.43 -0.15 0.37 0.23 - - -0.99 -1.8 0.31 0.42 0.18 -0.12 -1.16 0.21 0.27 0.31 0.41 0.4 0.2 1.3 -0.06
Solyc09g018020.3.1 (Solyc09g018020.3)
- -7.53 -7.03 -7.05 -0.32 2.49 -3.93 2.38 0.73 -0.32 -6.95 -3.65 - - - - -6.14 - - -6.71 - -8.05 -8.25 -9.56 -6.88 - - - -9.2 - -6.6 -7.13 4.3 -7.45
Solyc09g083050.3.1 (Solyc09g083050.3)
-0.64 -4.57 0.93 -0.45 0.64 1.49 -1.25 1.09 1.56 0.36 -3.1 -2.85 -6.89 -7.28 2.01 0.01 1.01 -3.99 -6.97 -0.5 1.45 -6.23 -5.6 -5.96 -5.88 -0.04 -7.2 -3.9 -3.61 -4.66 -4.68 -6.11 2.45 0.96
Solyc09g091700.3.1 (Solyc09g091700.3)
-3.83 -2.67 -0.99 0.01 -0.33 1.81 -4.14 1.06 0.98 0.43 1.75 3.35 -1.87 -1.15 -0.1 -0.23 -0.75 - - -2.71 -0.99 -2.52 -1.06 -2.61 -3.21 -1.07 -1.22 -1.18 -1.42 -1.6 -1.56 -2.3 0.59 -2.87
Solyc09g092270.3.1 (Solyc09g092270.3)
-6.92 -8.53 -6.94 -9.45 1.32 2.5 1.04 1.32 1.39 0.57 -0.2 -0.68 -0.07 -0.61 -0.0 -1.01 -0.36 -9.84 -11.15 -1.11 -2.98 -1.06 -0.08 -0.02 -0.9 0.74 -1.87 -2.08 -2.73 -2.9 -1.29 -4.43 2.4 -3.77
Solyc10g009240.3.1 (Solyc10g009240.3)
0.52 - -2.29 - 0.86 2.03 -7.26 -0.24 1.11 2.12 -3.43 -4.56 -1.59 -5.25 1.33 1.8 1.97 - -9.25 -2.26 -1.82 - -7.83 -6.12 -5.26 -0.43 -7.26 -8.03 - - -6.24 - 0.88 2.48
Solyc10g081490.2.1 (Solyc10g081490.2)
-3.67 - -0.8 -3.08 2.09 3.36 -2.02 2.76 2.33 0.71 -6.22 -6.93 - - -5.3 -6.04 -5.51 -6.61 - - -6.63 -5.46 -5.45 -3.96 -3.41 - -4.07 -4.35 -4.56 -6.96 -7.71 -5.59 1.5 0.78
Solyc10g085610.2.1 (Solyc10g085610.2)
-1.41 -2.55 3.56 -0.41 1.18 2.48 -1.8 1.82 -0.24 -0.32 - -4.82 -6.67 -4.2 0.16 -0.04 -0.05 - -6.12 -8.47 -5.53 -4.38 -5.19 -4.86 -5.01 - -0.64 -0.78 -1.81 -4.21 -4.7 -4.54 1.07 -0.93
Solyc11g008630.2.1 (Solyc11g008630.2)
-4.36 -9.62 -3.81 -7.32 0.24 1.65 -4.03 1.59 0.55 -0.53 -2.97 -5.29 -7.23 -9.06 -0.33 -0.76 -0.92 - -12.44 -4.02 -1.89 0.75 0.5 2.19 2.44 -4.56 -0.49 0.01 -0.43 -0.2 0.04 -1.69 2.03 -4.28
Solyc11g065360.2.1 (Solyc11g065360.2)
-3.02 -7.35 -6.97 -9.5 -0.43 0.6 -0.53 0.54 0.49 0.67 -0.78 -1.52 -1.6 -2.56 2.15 1.89 1.71 -8.98 -10.07 -0.38 -1.03 -1.5 -0.61 0.86 1.18 2.0 -1.62 -1.45 -1.67 -2.73 -1.68 -3.8 0.42 -1.38
Solyc11g068765.1.1 (Solyc11g068765.1)
- - - - 1.9 0.4 -3.96 0.8 -0.0 0.8 -3.97 -8.71 -0.07 -1.7 1.68 2.86 1.75 -8.55 - -3.13 -0.45 -1.84 -2.11 -1.56 -1.45 -1.05 0.7 0.45 -0.19 -0.53 -0.73 -2.02 0.37 -6.19
Solyc11g072990.2.1 (Solyc11g072990.2)
-3.5 - -7.26 -5.48 1.54 1.79 -0.43 1.6 0.48 0.54 0.51 -0.31 -4.18 -4.45 1.02 -0.35 0.79 - - -0.69 0.07 -2.19 -1.18 -0.28 0.3 1.56 -3.09 -3.2 -3.95 -3.52 -2.96 -5.32 2.59 -2.77
Solyc12g006910.2.1 (Solyc12g006910.2)
-4.5 -3.68 -0.97 -0.58 0.15 1.48 -1.79 2.59 -0.6 1.03 -1.66 -2.47 -3.16 -5.48 1.9 2.17 1.85 -5.9 - -4.12 - -4.09 -2.64 -2.3 -1.64 0.9 -2.49 -3.08 -4.31 -3.84 -2.75 - 2.01 -5.2
Solyc12g010060.2.1 (Solyc12g010060.2)
0.48 0.11 0.28 0.27 0.47 0.48 0.0 0.14 -0.47 0.33 -0.47 -0.42 -0.59 -0.8 0.58 0.56 0.71 -6.02 -7.25 -0.62 -0.81 0.08 -0.29 -0.15 -0.01 -0.56 -0.35 -0.2 -0.02 0.16 0.1 0.41 0.84 0.37
Solyc12g057030.2.1 (Solyc12g057030.2)
-0.51 -2.01 -1.2 -2.74 1.5 1.92 0.22 2.85 0.34 -1.01 0.42 -0.01 -4.23 -6.68 -2.1 - - - - - -4.34 -2.85 -0.06 -1.77 -4.5 - -5.73 -5.83 -3.69 -5.64 -1.67 -5.16 3.45 -2.1
Solyc12g089230.2.1 (Solyc12g089230.2)
- - - - 0.29 1.66 1.43 2.03 1.49 1.69 -3.0 -3.04 - - 1.73 1.29 1.07 - - -3.23 -5.35 -3.48 -2.29 -1.83 -2.02 0.06 - -5.62 -5.0 - -3.58 - 2.71 -5.42

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.