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View as: (view raw or row-normalized)
View using InCHLib : here ( Experimental feature, still under development)
(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)
| Gene | Synchronized diurnal culture 1h (CC-2895) | Synchronized diurnal culture 2h (CC-2895) | Synchronized diurnal culture 3h (CC-2895) | Synchronized diurnal culture 4h (CC-2895) | Synchronized diurnal culture 5h (CC-2895) | Synchronized diurnal culture 6h (CC-2895) | Synchronized diurnal culture 7h (CC-2895) | Synchronized diurnal culture 8h (CC-2895) | Synchronized diurnal culture 9h (CC-2895) | Synchronized diurnal culture 10h (CC-2895) | Synchronized diurnal culture 11h (CC-2895) | Synchronized diurnal culture 11.5h (CC-2895) | Synchronized diurnal culture 12h (CC-2895) | Synchronized diurnal culture 12.5h (CC-2895) | Synchronized diurnal culture 13h (CC-2895) | Synchronized diurnal culture 13.5h (CC-2895) | Synchronized diurnal culture 14h (CC-2895) | Synchronized diurnal culture 14.5h (CC-2895) | Synchronized diurnal culture 15h (CC-2895) | Synchronized diurnal culture 16h (CC-2895) | Synchronized diurnal culture 17h (CC-2895) | Synchronized diurnal culture 18h (CC-2895) | Synchronized diurnal culture 19h (CC-2895) | Synchronized diurnal culture 20h (CC-2895) | Synchronized diurnal culture 21h (CC-2895) | Synchronized diurnal culture 22h (CC-2895) | Synchronized diurnal culture 23h (CC-2895) | Synchronized diurnal culture 24h (CC-2895) | Nitrogen deficient 0min (wt, 2173) | Nitrogen deficient 8min (wt, 2173) | Nitrogen deficient 18min (wt, 2173) | Nitrogen deficient 45min (wt, 2173) | Nitrogen deficient 60min (wt, 2173) | Nitrogen minus 0h (sta_6) | Nitrogen minus 0.5h (sta_6) | Nitrogen minus 2h (sta_6) | Nitrogen minus 4h (sta_6) | Nitrogen minus 8h (sta_6) | Nitrogen minus 12h (sta_6) | Nitrogen minus 24h (sta_6) | Nitrogen minus 48h (sta_6) | Nitrogen starvation 0h (4A+, CC-4051) | Nitrogen starvation 0.5h (4A+, CC-4051) | Nitrogen starvation 10min (4A+, CC-4051) | Nitrogen starvation 1h (4A+, CC-4051) | Nitrogen starvation 2h (4A+, CC-4051) | Nitrogen starvation 6h (4A+, CC-4051) | Nitrogen starvation 8h (4A+, CC-4051) | Nitrogen starvation 24h (4A+, CC-4051) | Nitrogen starvation 48h (4A+, CC-4051) | Sulfur starvation 0h (4A+, CC-4051) | Sulfur starvation 0.5h (4A+, CC-4051) | Sulfur starvation 10min (4A+, CC-4051) | Sulfur starvation 1h (4A+, CC-4051) | Sulfur starvation 2h (4A+, CC-4051) | Sulfur starvation 6h (4A+, CC-4051) | Sulfur starvation 8h (4A+, CC-4051) | Sulfur starvation 24h (4A+, CC-4051) | Sulfur starvation 48h (4A+, CC-4051) | Copper deficient (wt, 2173) | Copper sufficient (wt, 2173) | Iron deprivation 0h (CC-4532) | Iron deprivation 0.5h (CC-4532) | Iron deprivation 1h (CC-4532) | Iron deprivation 2h (CC-4532) | Iron deprivation 4h (CC-4532) | Iron deprivation 8h (CC-4532) | Iron deprivation 12h (CC-4532) | Iron deprivation 24h (CC-4532) | Iron deprivation 48h (CC-4532) | Iron replete (wt, 2173) | Iron-deficient (wt, 2173) | Iron-limited (wt, 2173) | Zink minus (CC-4532) | Zink replete - early (CC-4532) | Zink replete - late (CC-4532) | Zink resupply 1.5h (CC-4532) | Zink resupply 3h (CC-4532) | Zink resupply 4.5h (CC-4532) | Zink resupply 12h (CC-4532) | Zink resupply 24h (CC-4532) | Vitamin B12 and thiamine 0h (A31) | Vitamin B12 and thiamine 0h (DHC16) | Vitamin B12 and thiamine 12h (A31) | Vitamin B12 and thiamine 12h (DHC16) | Vitamin B12 and thiamine 48h (A31) | Vitamin B12 and thiamine 48h (DHC16) | Hydrogen peroxide 0.5h (wt, 2173) | Hydrogen peroxide 0h (wt, 2173) | Hydrogen peroxide 1h (wt, 2173) | Rapamycin 0h (A31) | Rapamycin 0h (DHC16) | Rapamycin 2h (A31) | Rapamycin 8h (A31) | Rapamycin 12h (A31) | Rapamycin 12h (DHC16) | Rapamycin 48h (A31) | Rapamycin 48h (DHC16) | UV-B 1h (wt, CC-125) | BV IXa 0.1mM (4A+, CC-4051) | BV IXa 0.1mM (hmox1 mutant) | BV IXa 0mM (4A+, CC-4051) | BV IXa 0mM (hmox1 mutant) |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| -1.96 | -0.36 | 0.23 | 0.32 | 0.25 | -0.09 | 0.66 | 0.96 | 1.14 | 1.12 | 1.05 | 0.76 | 0.84 | 1.38 | 0.99 | 0.65 | 0.32 | 0.34 | 0.37 | 0.1 | 0.63 | 1.07 | 0.92 | 0.89 | 1.15 | 1.06 | 1.49 | 1.04 | -2.1 | -0.74 | -1.54 | -1.09 | -0.79 | 0.3 | 0.46 | 0.62 | 0.31 | 0.2 | -0.22 | -0.13 | -0.15 | 0.95 | 0.88 | 0.58 | 1.65 | 1.62 | 0.78 | 0.83 | 0.81 | 1.08 | 0.03 | -1.2 | -0.05 | -0.28 | 0.38 | -0.0 | 0.49 | -0.14 | 0.01 | -1.1 | -0.64 | -1.73 | -1.34 | -1.89 | -0.88 | -2.03 | -1.65 | -1.99 | -1.36 | -0.78 | -0.96 | -0.59 | -1.05 | -1.36 | -2.58 | -1.43 | -1.68 | -1.33 | -2.01 | -1.38 | -1.96 | -1.52 | -3.57 | -1.93 | -2.49 | -1.34 | -1.93 | 0.38 | -0.33 | 0.69 | -1.52 | -3.57 | -1.43 | -1.29 | -1.93 | -2.49 | -1.34 | -1.93 | -2.86 | -2.17 | -2.21 | -1.83 | -2.01 | |
Cre02.g095113 (PFI) | -1.43 | -0.47 | -0.26 | 0.3 | -0.08 | 0.33 | 0.39 | 0.85 | 0.9 | 1.23 | 0.93 | 0.65 | 0.82 | 1.3 | 0.99 | 0.46 | 0.44 | 0.31 | 0.3 | 0.14 | 0.35 | 0.88 | 0.98 | 0.96 | 1.44 | 1.38 | 1.13 | 1.11 | -0.93 | -0.22 | -0.15 | -0.49 | 0.03 | 0.51 | 0.78 | 0.9 | 0.42 | 0.55 | 0.41 | 0.3 | 0.09 | 0.2 | 0.47 | 0.19 | 1.44 | 1.29 | 0.57 | 0.49 | 0.56 | 0.58 | -0.05 | -1.21 | -0.14 | -0.2 | 0.3 | 0.31 | 0.6 | 0.02 | 0.04 | -0.5 | -0.62 | -1.56 | -1.41 | -1.36 | -1.24 | -2.28 | -1.54 | -1.64 | -1.25 | -0.94 | -0.68 | -0.58 | -1.15 | -1.99 | -2.55 | -1.68 | -2.59 | -2.46 | -2.08 | -2.02 | -2.08 | -1.77 | -2.42 | -0.94 | -1.15 | -2.08 | -0.67 | 0.01 | -0.63 | 0.27 | -1.77 | -2.42 | -1.11 | -0.97 | -0.94 | -1.15 | -2.08 | -0.67 | -2.45 | -1.62 | -1.56 | -1.31 | -1.54 |
Cre12.g488250 (AAR3) | -0.51 | -0.27 | -0.45 | -0.32 | -0.41 | -0.26 | -0.12 | 0.2 | 0.25 | 1.01 | 0.88 | 0.61 | 0.9 | 1.06 | 0.77 | 0.61 | 0.56 | 0.44 | 0.63 | 0.37 | 0.48 | 0.97 | 0.9 | 0.83 | 1.03 | 1.01 | 1.24 | 0.9 | -1.25 | -1.64 | -2.62 | -0.88 | -0.11 | -0.41 | 0.42 | 0.18 | 0.28 | 0.3 | 0.19 | 0.13 | -0.05 | 0.5 | 0.84 | 0.07 | 0.95 | 0.9 | 0.41 | 0.66 | 0.45 | 0.64 | 0.01 | 0.29 | -0.35 | 0.26 | 0.48 | 0.34 | 0.76 | 0.93 | 1.26 | -0.37 | -0.6 | -1.25 | -0.89 | -1.03 | -0.91 | -1.33 | -1.16 | -0.97 | -0.41 | -0.08 | -0.38 | -0.21 | -0.64 | -2.05 | -1.84 | -1.14 | -1.94 | -2.05 | -1.85 | -1.54 | -1.51 | -1.53 | -2.26 | -0.33 | -1.27 | -1.75 | -0.82 | 0.3 | 0.08 | 0.51 | -1.53 | -2.26 | -1.29 | -1.15 | -0.33 | -1.27 | -1.75 | -0.82 | -1.29 | -1.01 | -0.67 | -1.02 | -0.95 |
Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.