Heatmap: Cluster_595 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc08g066710.2.1 (Solyc08g066710.2)
-0.55 - - - 2.15 -4.69 - - -1.01 -0.76 -3.35 - 1.52 -0.02 - - -3.63 - - - 0.07 0.62 - -0.14 0.23 - -1.04 2.05 2.86 0.21 0.84 1.97 - -1.69
Solyc08g066720.2.1 (Solyc08g066720.2)
-0.89 - - - 2.74 -3.63 - -0.99 -1.72 -0.99 -2.07 - 1.22 1.97 -3.07 - -4.45 - - -3.25 1.06 -0.16 -5.12 -0.67 -0.18 -0.91 -0.99 1.48 2.21 0.12 -0.52 1.37 - 0.38

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.