Heatmap: Cluster_188 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g020280.1.1 (Solyc01g020280.1)
- - - - 4.77 2.76 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc01g020406.1.1 (Solyc01g020406.1)
- - - - 4.21 - - - - - - - - - - - - 3.95 - - - - - - - - - - - - - - - -
Solyc01g049640.2.1 (Solyc01g049640.2)
- - - - 5.0 - - - - - - - - - - - - - - - - - - - 0.96 - - - - - - - - -
Solyc01g056293.1.1 (Solyc01g056293.1)
- - - - 5.01 -0.7 - - - - - - - - - - - - - - - - - - - - - 0.17 - - - - - -
Solyc01g066287.1.1 (Solyc01g066287.1)
- - - - - - - - - - - - - 3.08 - - - 4.68 - - - - - - - - - - - - - - - -
Solyc01g100850.3.1 (Solyc01g100850.3)
0.22 -0.43 1.26 1.1 2.28 0.32 0.18 -0.68 0.58 -0.46 -0.71 -0.8 -0.65 -0.76 -0.31 0.58 -0.23 -3.76 -4.34 -1.09 -0.14 -0.29 0.17 0.14 -0.27 -1.02 -0.18 -0.36 -0.47 -0.57 -0.19 -0.48 -2.49 0.27
Solyc02g014547.1.1 (Solyc02g014547.1)
- - - - - - - - 2.9 - - - - - - - - 3.61 0.5 - - - - - -0.39 3.04 - - -0.82 - - - - 1.75
Solyc02g021780.2.1 (Solyc02g021780.2)
- - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc02g032590.1.1 (Solyc02g032590.1)
- - - - 4.42 1.7 - - - - 3.21 - - - - - - - - - - - - - - - - - - - - - - -
Solyc02g061620.2.1 (Solyc02g061620.2)
- - - - 3.68 1.07 -0.59 - - - - - - - 1.25 - -0.86 - - - - - - - - 3.92 - - -1.48 - - - - -
Solyc02g062830.2.1 (Solyc02g062830.2)
- - - 1.81 4.65 -0.68 - - 1.9 - - - - - - - - - - - - - - - -0.03 - - - - - - - - -
Solyc02g072535.1.1 (Solyc02g072535.1)
- - 0.27 0.26 -0.71 1.57 - - 1.02 2.76 - - - - - 1.22 - 2.9 2.57 - -0.06 - -0.34 -2.31 -0.15 -0.69 - - - - - - - -
Solyc02g081340.3.1 (Solyc02g081340.3)
-5.39 - -4.77 -4.59 4.54 0.69 1.71 0.67 0.45 -5.85 -7.63 -9.02 -7.01 -10.03 -5.27 -4.11 -5.24 - - -9.62 -7.84 -4.87 -5.54 -4.85 -5.53 - -6.82 -7.39 -6.85 -5.48 -5.84 -4.64 0.51 0.1
Solyc02g081550.3.1 (Solyc02g081550.3)
-1.22 -8.05 -2.51 - 4.29 -1.86 -2.8 -3.29 -3.36 -1.87 -5.63 -1.06 -5.28 -2.84 -6.67 - -6.56 -9.85 -6.55 -1.08 -2.23 -2.08 -3.94 -2.77 -2.41 -0.41 -2.96 -2.13 -2.07 -1.96 -2.53 -1.02 -4.48 3.11
Solyc02g085020.3.1 (Solyc02g085020.3)
-6.61 -7.82 -4.35 -5.86 3.11 0.45 2.66 0.91 -0.19 -3.9 -3.96 -6.8 1.21 0.57 -5.63 -7.78 -6.11 - - -6.59 0.88 -3.26 -3.45 -3.52 -4.08 -3.26 0.53 0.38 0.09 -1.42 -2.12 -3.34 1.7 -0.27
Solyc02g085025.1.1 (Solyc02g085025.1)
- - -2.92 - 3.53 0.39 1.76 1.55 -1.3 -3.32 -4.06 -4.35 1.54 0.96 -4.77 -5.61 - - - - 0.37 -3.44 -3.76 -3.9 - -0.97 -0.18 -0.25 -0.7 -4.97 -3.94 -4.82 1.54 0.78
Solyc03g025190.4.1 (Solyc03g025190.4)
-8.29 - -6.0 - 3.45 1.26 2.17 1.57 1.4 -5.38 -7.98 -5.73 -3.82 -3.9 -6.81 -8.04 -9.09 -9.13 - -9.21 - -4.67 -3.51 -4.04 -4.75 - -2.1 -2.0 -2.21 -4.12 -4.07 -4.73 3.0 0.35
Solyc03g033300.2.1 (Solyc03g033300.2)
-4.39 -1.95 -1.94 0.99 3.43 -1.41 - -3.9 1.33 2.2 -2.58 -5.02 -2.09 -2.61 -1.12 1.09 -1.38 - -5.72 -4.93 - -1.27 -1.73 -0.52 -1.21 - 1.0 0.76 0.77 -0.78 0.02 -1.24 -3.29 -2.89
Solyc03g112010.3.1 (Solyc03g112010.3)
-7.66 - - - 3.72 0.87 -1.92 -0.91 0.78 0.06 -1.65 -1.36 - -7.85 0.05 -0.1 -1.02 - - -3.16 -4.31 0.6 0.13 0.8 0.35 -1.36 -1.73 -0.91 -1.11 0.34 0.43 0.4 -0.3 -3.64
Solyc03g115720.3.1 (Solyc03g115720.3)
-0.14 -0.35 -0.27 -0.29 2.65 1.04 1.12 -0.58 0.5 -0.32 -0.44 -1.0 -0.49 -0.49 -0.4 0.16 -0.05 -5.28 -4.45 0.02 -0.46 -0.35 -0.23 -0.21 -0.48 -0.21 -0.22 -0.22 -0.2 -0.49 -0.31 -0.5 -2.32 -0.2
Solyc04g005880.1.1 (Solyc04g005880.1)
- - - - - - - - - - 1.48 - 2.51 4.36 - - - - 1.22 - - - - - - - 1.41 - - - - - - -
Solyc04g010337.1.1 (Solyc04g010337.1)
- - - - 4.97 1.37 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc04g024380.1.1 (Solyc04g024380.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - 2.68 4.04 - - 3.48 - -
Solyc04g024605.1.1 (Solyc04g024605.1)
- - - - 4.48 0.51 - - - - - - - - - - - - 3.35 - - - - - - - - - - - - - - -
Solyc04g025373.1.1 (Solyc04g025373.1)
- - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc04g078140.3.1 (Solyc04g078140.3)
-3.62 -4.07 -2.04 -3.68 1.89 -0.8 0.2 -0.33 1.33 -0.05 -2.71 -4.89 2.01 0.76 -2.48 -2.6 -2.97 -6.62 -8.74 -5.5 -0.91 -0.97 -2.05 -1.68 -1.75 -3.59 1.81 1.78 1.53 0.53 -0.05 -1.62 1.37 -1.75
Solyc05g008250.2.1 (Solyc05g008250.2)
- - - - 4.11 2.49 1.24 0.25 1.29 - - - - - -0.42 - - - - - -2.74 - - - -4.17 - - -3.18 - -2.38 - -3.34 1.92 -
Solyc05g010320.3.1 (Solyc05g010320.3)
-1.41 -3.36 -3.61 -4.06 2.24 1.42 0.82 0.28 1.31 -0.59 0.05 -1.06 -0.32 -0.99 -1.02 -2.39 -1.63 -5.57 -5.54 -5.44 -1.18 0.63 0.66 0.73 0.48 -2.84 0.28 0.41 0.35 0.43 0.4 0.01 0.37 -1.19
Solyc05g010630.3.1 (Solyc05g010630.3)
- -1.93 -2.61 - 3.72 0.39 -3.47 1.78 0.52 -1.61 -1.17 - -3.0 -1.57 -1.03 -1.48 -0.54 - - -2.82 -2.14 0.55 0.16 0.59 1.06 - 0.15 -0.84 -1.66 -1.01 0.04 -3.71 -0.49 -0.85
Solyc05g024325.1.1 (Solyc05g024325.1)
- - - - 4.41 - - - - - - - - - 1.87 - - 2.25 1.57 - - - - - - - - - 0.44 - - - - -
Solyc05g045945.1.1 (Solyc05g045945.1)
- - - - 4.98 1.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc05g053890.2.1 (Solyc05g053890.2)
-1.25 0.13 0.43 0.47 2.76 0.07 0.12 -1.85 0.43 -0.36 -1.08 -0.97 -1.39 -1.55 0.46 1.83 0.98 - -11.43 -4.37 -4.25 -0.63 0.72 0.14 -0.57 -5.23 -0.27 -1.13 -1.27 -1.47 -0.65 -2.1 -3.6 1.41
Solyc06g005575.1.1 (Solyc06g005575.1)
- - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc06g042954.1.1 (Solyc06g042954.1)
- - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc06g060610.2.1 (Solyc06g060610.2)
-0.11 0.97 1.13 2.14 -0.82 -0.62 0.11 -0.98 0.39 0.65 -0.3 -0.76 0.19 -0.26 1.06 1.67 1.47 -0.96 -1.09 -2.57 -2.14 -1.16 -0.78 -1.0 -1.18 -3.19 -0.51 -0.85 -0.99 -1.1 -1.0 -1.64 -3.33 -0.32
Solyc06g066090.3.1 (Solyc06g066090.3)
-0.18 -0.87 1.59 1.07 0.46 -0.36 0.57 -0.92 0.08 0.17 -0.54 -1.16 -0.16 -0.5 1.36 1.9 1.5 -1.57 -1.61 -1.29 -1.58 -0.59 0.34 -0.08 -0.79 -1.23 -0.23 -0.81 -1.21 -1.06 -0.86 -1.79 -2.02 -0.9
Solyc06g075380.1.1 (Solyc06g075380.1)
- - - - 4.53 - - - - - 2.32 - - - - - - - - - - - 2.56 - - - - - - - - - - -
Solyc07g018435.1.1 (Solyc07g018435.1)
- - - - 4.61 - - - - - 1.73 - - - - - 1.54 - - - - - - - 0.86 - - 0.7 - - - - - -
Solyc07g021070.1.1 (Solyc07g021070.1)
- - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc07g041683.1.1 (Solyc07g041683.1)
- - - - - - - - - - - - - - - - - 5.09 - - - - - - - - - - - - - - - -
Solyc07g051890.1.1 (Solyc07g051890.1)
0.6 -3.04 2.57 0.64 3.0 1.09 -0.7 -5.5 -1.66 0.53 -5.59 -5.61 -4.82 -5.62 -0.22 2.04 -0.07 - - -0.55 -1.64 -4.89 - -2.11 -1.87 1.22 - -6.81 -6.24 - -5.41 -3.82 -2.65 1.1
Solyc07g052490.3.1 (Solyc07g052490.3)
-2.82 - 1.59 -0.66 3.93 -2.07 -0.77 -1.84 0.1 -0.15 -0.79 -2.99 1.05 -0.94 0.87 1.55 0.53 - - -7.78 -2.99 -3.43 -0.49 -1.6 -2.51 -6.7 -1.62 -2.58 -3.07 -3.76 -2.52 -6.17 -5.33 -4.63
Solyc07g052810.2.1 (Solyc07g052810.2)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc08g062430.1.1 (Solyc08g062430.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc08g080040.3.1 (Solyc08g080040.3)
-1.58 -5.49 -3.61 -3.77 4.08 -0.08 2.28 -0.03 -0.76 -1.38 -2.87 -3.48 -3.09 -4.07 -3.0 -2.83 -2.98 -7.82 -7.98 -3.55 1.34 -3.81 -3.77 -4.05 -4.36 -1.08 -3.46 -2.91 -3.68 -3.48 -3.22 -3.53 1.74 -0.35
Solyc08g080340.3.1 (Solyc08g080340.3)
0.34 0.55 -0.13 1.55 -1.3 -0.74 -0.01 -0.16 -0.1 0.95 -0.03 -0.37 0.02 -0.47 1.13 1.34 1.21 -9.74 -9.19 -3.1 -0.84 -0.41 0.38 0.18 -0.18 -2.88 0.1 -0.16 -0.5 -0.52 -0.12 -0.78 -1.01 -0.2
Solyc09g008220.3.1 (Solyc09g008220.3)
-0.88 1.58 2.61 -0.75 2.58 0.23 2.26 0.35 0.46 0.22 - - - - - - - - - -1.72 -0.74 -1.41 - -2.3 -0.4 - -0.36 -0.67 0.04 - -1.81 -0.87 0.04 0.52
Solyc09g047933.1.1 (Solyc09g047933.1)
- - - - 4.4 2.84 - - 1.3 - - - - - - - - - - - - - - - - - - 1.7 - - - - - -
Solyc09g059732.1.1 (Solyc09g059732.1)
- - - - - - - - - 3.96 - - - - - - - - - - - 2.15 - - - - - 0.53 3.65 - - - - -
Solyc09g061515.1.1 (Solyc09g061515.1)
- - - - 3.68 - - - - - - - 3.13 - - - - - - - - - - - - - - 1.74 - - - 3.19 - -
Solyc09g061590.1.1 (Solyc09g061590.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc09g066470.3.1 (Solyc09g066470.3)
-0.25 -0.71 1.63 1.21 1.24 -0.24 0.15 -0.61 0.62 0.53 -0.27 -0.91 -0.34 -0.67 0.47 0.89 0.6 -1.6 -1.73 -2.23 -1.53 0.07 0.29 0.31 0.07 -1.54 -0.41 -0.39 -0.46 -0.4 -0.18 -0.46 -2.34 -0.39
Solyc09g082660.3.1 (Solyc09g082660.3)
-10.29 - -8.39 -9.16 4.19 0.4 1.39 1.01 -1.14 -5.81 - - -5.32 -4.58 -5.99 -4.42 -7.19 -7.24 -8.9 -10.33 -6.06 -8.32 -11.03 -8.43 -8.84 -6.97 -6.08 -5.04 -5.52 - -7.73 -8.28 3.04 -0.17
Solyc09g092690.3.1 (Solyc09g092690.3)
-2.45 1.84 -2.18 0.55 3.44 -1.02 2.27 -0.68 -0.44 -4.46 -2.96 1.21 -1.91 0.57 -4.89 - -7.74 -8.69 - -3.01 -0.49 -2.88 -1.64 -2.24 -3.49 -4.78 -0.09 0.28 0.87 -1.84 -2.16 -2.54 -7.82 -1.12
Solyc10g005400.3.1 (Solyc10g005400.3)
- - - - -2.7 2.55 -2.55 4.57 0.57 -2.34 -2.64 -4.74 - - -6.74 -7.23 -6.08 - - - - -5.57 -4.64 -4.75 - - -9.0 -6.71 -6.16 -8.1 -2.75 - 0.87 -
Solyc10g049473.1.1 (Solyc10g049473.1)
- - - - 4.67 1.74 - - - - - - - 2.37 - - - - - - - - - - - - - - - - - - - -
Solyc10g050370.2.1 (Solyc10g050370.2)
- - - - - - - - - - - - - - - - - 4.91 - - - - - - - - - 0.81 1.1 - - - - -
Solyc10g050760.1.1 (Solyc10g050760.1)
2.11 - 0.94 -0.29 4.11 -2.38 - - - - -1.21 - -0.04 - 0.77 - - - - - 0.92 - - - -0.71 - - - -2.09 - - -0.72 - 1.6
Solyc10g054276.1.1 (Solyc10g054276.1)
- - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc10g054960.1.1 (Solyc10g054960.1)
- - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc10g054963.1.1 (Solyc10g054963.1)
- - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc10g074405.1.1 (Solyc10g074405.1)
- - - - 4.96 1.57 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc10g083460.1.1 (Solyc10g083460.1)
-0.18 -2.11 1.79 0.46 2.37 0.91 -2.44 -1.32 -0.68 -0.48 -2.22 -1.12 0.36 0.02 -0.92 -0.07 -0.97 1.08 -0.27 -0.42 -1.63 -1.88 -1.44 -1.43 -1.44 0.79 -2.44 -2.03 -1.67 -2.26 -2.16 -1.95 -1.97 2.41
Solyc10g086250.2.1 (Solyc10g086250.2)
-3.8 -1.95 -1.11 -1.85 4.01 2.82 1.79 0.79 1.56 -2.09 - - - - -7.89 -6.41 -7.33 -7.64 - - - -3.91 -2.77 -2.28 -2.41 - -6.5 -6.83 -5.56 -5.53 -6.89 - -1.67 -1.62
Solyc10g086270.2.1 (Solyc10g086270.2)
- - - - 3.06 3.24 2.31 2.87 1.09 - - - - -5.09 - - - -4.92 - - - - -3.78 -7.6 -6.75 - - -6.37 -5.86 - -4.97 - 0.53 -3.36
Solyc11g006290.2.1 (Solyc11g006290.2)
-3.41 -7.87 0.49 -1.99 0.93 -0.79 -6.1 -4.68 0.38 0.99 -7.84 -9.01 -6.5 -7.71 -3.04 -0.56 -2.86 1.86 0.73 -0.57 -5.78 0.91 1.51 2.16 0.97 2.52 -2.14 -1.09 -1.18 -2.81 -1.08 -5.0 -0.95 -1.93
Solyc11g020825.1.1 (Solyc11g020825.1)
- - - - - - - - - - - - 4.46 2.66 - - - - - - - - - - - - - - 2.5 - - - - -
Solyc11g028201.1.1 (Solyc11g028201.1)
- - - - - - - - - - - - - - - - - 5.09 - - - - - - - - - - - - - - - -
Solyc11g065935.1.1 (Solyc11g065935.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc11g066580.2.1 (Solyc11g066580.2)
- -6.83 -6.93 -8.78 3.02 -0.45 1.27 -0.09 -1.94 -3.31 -4.78 - 1.44 -0.89 -9.01 - - - - - 0.75 -1.25 -3.55 -1.83 -1.91 -2.15 0.83 1.78 2.05 -0.01 -1.06 -1.3 1.71 -0.53
Solyc11g067163.1.1 (Solyc11g067163.1)
- 1.28 1.07 - 1.17 -5.2 - - - 2.63 - - - - - - - - - - - - - - - - 4.12 1.22 -1.54 - -0.65 -1.81 - -
Solyc12g019590.1.1 (Solyc12g019590.1)
- - - - - - - - - - - - - - - - - 5.09 - - - - - - - - - - - - - - - -
Solyc12g039040.1.1 (Solyc12g039040.1)
- - - - - -0.03 - - 3.22 - - - - - - - - 4.57 - - - - - - - - - - - - - - - -
Solyc12g056570.1.1 (Solyc12g056570.1)
2.05 - -0.7 - - -5.6 - - 0.06 2.82 - - - -1.02 - - -4.38 - - - 1.06 -1.81 - -3.88 -3.05 -1.2 - 1.43 3.48 - -1.22 -1.69 - 1.57
Solyc12g062737.1.1 (Solyc12g062737.1)
- - - - 5.09 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc12g077350.1.1 (Solyc12g077350.1)
- - - - 4.98 1.31 - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc12g088170.2.1 (Solyc12g088170.2)
-9.45 - - - 3.97 1.16 2.44 1.54 -0.29 -4.32 - - -5.13 -6.96 -9.08 - - - -9.45 - - -7.68 -9.73 -6.5 -8.61 - -4.28 -4.96 -5.6 -6.47 -8.41 - 2.55 -0.27
Solyc12g095750.2.1 (Solyc12g095750.2)
-5.77 - - - 0.54 2.51 1.09 3.15 0.84 1.52 -0.94 -3.47 0.22 -2.22 0.64 0.67 0.26 - - -4.45 -4.71 -1.2 -0.29 -1.8 -4.22 -1.92 -0.9 -1.55 -1.43 -2.72 -1.21 -5.44 -0.04 -3.55
Solyc12g098590.2.1 (Solyc12g098590.2)
-10.63 - - - 1.88 0.63 -0.48 0.12 -0.33 -1.03 -2.02 -1.93 -3.57 -3.59 -0.81 -0.96 -1.06 - - -6.34 -2.37 1.32 0.8 1.07 1.44 -8.89 1.06 1.35 1.29 1.22 0.94 0.75 0.03 -2.51

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.