Heatmap: Cluster_227 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc00g217960.1.1 (Solyc00g217960.1)
0.93 -2.54 0.48 -0.14 0.87 -0.89 -4.09 -2.37 -0.03 -0.07 0.2 0.83 -0.31 0.58 0.72 0.96 1.61 -8.29 -7.3 1.22 0.19 -1.03 -1.64 -1.0 -1.15 1.26 -1.13 -1.12 -0.67 -1.06 -1.04 -0.94 -1.01 1.02
Solyc01g067010.3.1 (Solyc01g067010.3)
0.59 -9.53 -2.03 -5.58 -0.81 0.89 -1.81 -1.68 -0.08 0.97 0.7 0.76 -0.26 0.49 0.66 1.02 1.51 -10.4 - 1.39 0.89 -0.97 -1.14 -0.98 -1.44 1.08 -1.07 -0.67 -0.35 -1.58 -1.76 -0.72 -1.12 1.18
Solyc01g087980.3.1 (Solyc01g087980.3)
3.49 -3.0 -0.33 -1.15 -0.6 -0.47 -6.25 -3.8 -2.82 -1.27 -0.53 0.94 -0.08 1.78 0.45 0.14 0.56 -6.51 -6.07 -0.61 -1.94 -1.86 -2.19 -1.76 -1.99 -1.35 -2.49 -1.85 -1.76 -2.08 -2.54 -1.62 -2.37 2.14
Solyc01g088440.2.1 (Solyc01g088440.2)
0.98 -0.76 1.17 -0.37 2.66 0.63 -0.3 -0.25 0.26 -0.13 0.75 0.76 -2.52 -0.79 -0.52 -0.73 0.07 -7.57 - 0.35 -0.71 -0.85 -0.29 -0.42 -1.36 0.02 -1.1 -1.62 -1.29 -1.42 -0.68 -1.98 -2.27 1.14
Solyc01g098805.1.1 (Solyc01g098805.1)
1.27 -3.04 -0.78 -1.1 -0.05 -1.79 -0.83 -1.93 -0.55 -1.4 0.43 0.58 -0.22 1.09 -0.24 -0.22 -1.18 - - 0.14 -1.45 1.2 1.81 1.28 -0.63 0.39 0.42 -0.07 -0.99 -2.24 1.12 -0.71 -7.0 0.87
Solyc01g104725.1.1 (Solyc01g104725.1)
-2.57 -4.08 -4.9 -2.76 -5.2 -1.63 -8.71 -2.75 -1.04 -0.77 -3.08 1.11 1.63 3.41 -2.34 -3.59 -1.38 -5.98 -7.0 0.25 0.33 0.18 -1.07 -0.29 0.35 1.35 -1.62 -0.62 -0.05 0.03 -0.23 0.69 -4.33 0.17
Solyc01g104740.3.1 (Solyc01g104740.3)
-1.62 -4.74 -3.38 -4.83 -0.65 -1.16 -1.93 -5.58 -3.54 -0.0 -3.36 2.04 0.13 3.79 -3.73 -3.02 -2.09 -6.88 -10.0 1.71 1.11 -1.63 -1.42 -0.59 -0.88 -2.41 -1.96 -0.77 -1.13 -1.69 -3.0 -1.76 -3.41 0.84
Solyc01g107170.2.1 (Solyc01g107170.2)
2.22 -4.2 -0.14 -0.81 -3.84 0.3 -6.61 -5.33 -2.5 0.43 0.77 2.33 -0.63 1.76 -1.02 -1.21 -0.57 -10.5 -10.82 1.89 -0.15 -3.87 -3.34 -2.26 -3.34 1.69 -4.59 -3.7 -2.84 -4.61 -3.65 -3.6 -4.25 1.9
Solyc01g109190.1.1 (Solyc01g109190.1)
2.4 -2.5 -1.13 -1.18 -0.59 -0.72 0.9 - 0.56 -0.33 -1.35 -2.57 - -0.96 0.22 -0.41 0.45 - - -0.02 -0.54 0.54 0.32 0.86 -0.31 1.44 0.18 -0.04 0.05 -1.32 0.63 0.2 -0.47 0.28
Solyc01g109250.2.1 (Solyc01g109250.2)
2.52 -1.02 -0.4 1.42 2.0 0.69 -4.09 -1.8 0.12 -0.37 -0.43 0.45 -1.32 0.25 -2.42 -1.56 -2.44 - -10.0 -2.43 -1.44 0.05 -0.76 -0.74 -1.53 -5.07 -2.35 -2.07 -1.18 -0.7 -0.24 0.18 -1.9 2.38
Solyc01g112000.3.1 (Solyc01g112000.3)
2.76 -1.44 -0.62 -0.24 -0.36 -0.31 -4.99 -0.89 -2.33 -1.28 0.84 1.77 -1.05 0.92 -1.45 -1.13 -1.47 -0.05 -12.82 -0.42 0.59 -0.49 -0.79 -0.74 -1.2 -2.01 -1.17 -0.92 -0.38 -1.21 -0.39 -1.06 -0.51 1.98
Solyc02g070040.1.1 (Solyc02g070040.1)
2.58 -3.13 -0.89 -1.44 -0.11 -1.09 -3.09 -1.65 -0.53 -0.45 1.03 2.06 -1.47 -0.84 0.58 -0.08 0.91 -7.6 -7.75 -2.14 -2.03 -0.14 0.99 0.55 -1.14 -2.27 -1.97 -1.67 -1.66 -1.14 -0.28 -0.86 -1.8 1.93
Solyc02g082610.1.1 (Solyc02g082610.1)
1.98 -1.47 -1.06 -2.47 -4.94 -2.13 -2.72 -1.84 -1.97 1.15 0.21 1.19 -0.07 1.32 0.61 0.44 0.64 -4.76 - -0.7 -1.72 -0.2 0.45 0.21 -0.4 -1.29 -0.11 -0.11 -1.06 -0.22 0.18 0.11 -2.08 1.77
Solyc02g091180.1.1 (Solyc02g091180.1)
3.76 -0.36 0.27 -0.36 -2.24 -1.92 -8.47 -4.78 -4.49 -3.12 -1.34 -0.16 -1.67 -0.23 0.04 -0.24 0.34 - - 0.11 -5.02 -0.6 0.02 0.35 -2.04 -1.77 -0.8 -0.99 -2.4 -3.13 -1.91 -3.45 -3.85 2.32
Solyc03g026270.3.1 (Solyc03g026270.3)
4.55 - -2.48 -4.57 -5.5 -2.21 - -6.59 -4.82 - -1.99 -3.66 -3.38 -3.51 -3.26 -5.38 -3.41 - - 0.48 -3.62 -3.68 -3.72 -2.11 -4.54 -1.85 -3.77 -3.58 -5.67 -6.79 -4.0 -8.59 -5.99 2.8
Solyc03g026280.3.1 (Solyc03g026280.3)
4.1 -7.02 -1.4 -2.87 -5.07 -1.23 -8.83 -5.55 -4.32 -6.49 -0.76 -2.09 -1.3 -1.1 -3.02 -4.45 -3.88 - -9.98 -0.31 -5.9 0.07 -0.13 0.37 -2.1 -1.74 -0.81 -1.41 -2.68 -4.43 -0.69 -3.31 -3.43 2.87
Solyc03g093535.1.1 (Solyc03g093535.1)
2.26 -5.31 -0.19 -1.09 -0.42 1.99 - -0.44 -0.22 -3.28 -2.53 -1.08 -1.92 1.73 -1.66 -0.96 -0.37 - - 0.05 1.08 -0.24 0.42 1.16 -0.1 0.79 -2.62 -1.91 -0.34 -2.38 -0.68 -0.54 -1.55 1.2
Solyc03g093540.1.1 (Solyc03g093540.1)
1.55 -7.55 -1.79 -1.93 0.76 2.5 -9.37 -0.2 -1.54 -1.93 -1.36 0.85 -0.27 2.97 -1.88 -2.1 -1.26 - - -0.34 0.46 -1.13 -0.32 0.07 -1.15 -0.16 -2.64 -2.84 -2.1 -3.54 -1.28 -1.5 -1.72 1.26
Solyc03g093550.1.1 (Solyc03g093550.1)
0.94 -4.39 -1.59 -1.8 0.05 0.79 -9.21 -0.77 -1.27 -1.77 0.86 1.33 0.23 1.7 -1.16 -0.7 0.03 - - -0.55 -0.5 0.1 1.59 1.69 0.42 -1.32 -0.92 -1.17 -0.61 -1.61 -0.77 -0.47 -1.74 1.34
Solyc03g093560.1.1 (Solyc03g093560.1)
0.81 -4.57 -1.1 -2.78 0.08 -0.16 -6.74 -4.46 -2.31 -2.18 1.19 1.34 1.6 2.48 -3.07 -5.05 -3.08 - - 0.37 -0.14 -0.69 0.72 0.68 -0.93 1.18 -1.87 -1.79 -1.27 -1.88 -0.93 -0.42 -6.1 2.03
Solyc03g112340.1.1 (Solyc03g112340.1)
1.88 -3.11 -0.39 -1.7 -1.31 -0.5 -2.61 -3.9 -0.44 0.75 0.32 1.05 1.54 1.77 -1.56 -1.65 -0.44 -2.64 -2.99 1.2 -0.09 -1.53 -0.92 -0.83 -1.84 2.01 -2.01 -1.79 -1.09 -2.31 -1.73 -1.86 -2.8 1.65
Solyc03g116490.1.1 (Solyc03g116490.1)
0.46 -4.3 -0.62 -1.92 -0.47 -0.15 -6.21 -2.1 -0.81 1.4 -1.02 -0.6 0.61 0.08 0.66 1.29 1.52 -1.63 -0.43 1.03 0.26 -0.68 -1.43 -0.85 -0.42 1.41 -1.4 -0.71 -0.36 -0.7 -1.04 0.14 0.11 0.69
Solyc03g120740.1.1 (Solyc03g120740.1)
-0.25 0.01 0.9 -0.02 1.14 -0.22 -0.33 -0.62 -0.16 -0.65 0.39 0.79 0.48 0.8 -0.84 -1.17 -0.48 -3.85 -4.11 1.03 1.17 0.18 -0.6 -0.19 0.14 -0.56 -0.58 -0.39 -0.27 -0.12 0.12 -0.1 -2.02 0.08
Solyc04g018110.1.1 (Solyc04g018110.1)
-0.64 -4.32 -2.98 -0.94 -1.03 -0.04 -1.03 -2.47 -0.3 -0.36 0.73 0.87 1.7 1.1 -0.06 -0.1 0.89 -7.69 -7.36 1.55 0.56 0.14 0.17 0.37 -0.3 -0.07 -0.9 -0.5 -0.25 -0.08 0.19 0.14 -2.72 0.25
Solyc04g078640.2.1 (Solyc04g078640.2)
0.77 -2.25 -0.41 -1.25 -1.81 0.11 -9.28 -1.79 -1.59 -0.15 -0.08 -0.31 1.78 1.44 -1.28 -0.9 -0.14 - -9.32 1.89 0.82 -3.47 -5.72 -4.23 -3.03 2.71 -4.92 -3.82 -3.25 -3.33 -3.85 -2.27 -0.14 2.16
Solyc05g007900.2.1 (Solyc05g007900.2)
0.59 -4.83 -1.16 -3.35 1.16 -1.26 -1.75 -2.67 -1.32 -0.06 -2.56 0.36 0.07 1.26 -0.63 0.43 0.01 -8.03 -7.97 1.58 0.26 -0.06 0.43 0.73 0.36 -0.42 0.35 0.97 0.4 0.42 -0.94 0.32 -2.7 0.63
Solyc05g052040.1.1 (Solyc05g052040.1)
0.9 -2.27 -0.11 -0.59 -0.63 -0.37 -6.71 -3.67 -4.06 -2.64 1.49 1.77 1.76 2.21 -1.72 -0.82 0.79 -12.34 - 0.4 -0.25 -2.09 -0.99 -0.95 -2.44 -0.56 -5.22 -4.43 -2.89 -4.7 -2.48 -1.88 -1.31 2.68
Solyc05g052410.2.1 (Solyc05g052410.2)
-0.08 -2.21 -1.45 -2.48 0.98 0.65 -1.97 -2.07 -2.49 0.06 -1.65 2.12 -0.03 3.2 -1.04 -0.21 0.54 -5.4 -4.04 2.45 0.63 -2.79 -4.93 -3.35 -3.89 -1.73 -4.13 -2.87 -2.67 -3.5 -2.21 -3.73 -4.42 -0.15
Solyc06g074620.3.1 (Solyc06g074620.3)
3.04 -0.49 -0.55 -0.91 -1.79 -1.74 -2.82 -4.42 -1.73 0.1 -1.4 -1.08 -1.35 0.13 0.93 1.42 1.54 -4.82 -6.66 1.62 -0.24 -1.29 -2.0 -1.28 -1.75 0.32 -3.72 -3.16 -2.1 -2.94 -2.25 -1.18 -2.58 1.98
Solyc07g053550.2.1 (Solyc07g053550.2)
1.58 -2.58 0.47 -1.97 -0.29 -0.76 -3.56 -3.31 -1.33 -0.92 -0.4 1.1 2.0 2.01 -2.67 -2.83 -2.58 -5.68 -7.98 2.33 -0.67 -2.09 -1.42 -2.29 -2.89 1.89 -1.36 -1.4 -0.98 -2.69 -2.68 -2.73 -3.02 1.63
Solyc07g055190.3.1 (Solyc07g055190.3)
0.56 -2.17 -1.96 -2.61 -1.79 -0.34 -0.93 -2.31 -0.72 0.6 1.37 1.49 1.06 1.72 0.28 0.56 1.08 0.95 0.39 0.65 0.1 -1.24 -0.95 -0.97 -1.2 -1.79 -1.82 -2.04 -1.41 -1.25 -1.23 -1.34 -0.7 0.64
Solyc08g041860.1.1 (Solyc08g041860.1)
1.39 -1.16 -0.45 -0.26 -2.43 -0.71 -1.36 -2.35 -1.33 -1.0 0.15 0.24 -0.14 0.82 0.06 0.04 0.14 -5.23 -6.23 0.99 -0.64 0.71 0.88 0.85 0.13 -0.85 -0.32 -0.19 -0.16 0.16 0.51 0.19 -1.48 1.46
Solyc08g079700.2.1 (Solyc08g079700.2)
0.97 -2.79 0.34 -1.29 -0.31 -1.48 0.0 -2.64 -2.05 -0.9 1.4 1.78 0.65 2.09 0.2 0.42 0.59 -11.63 -11.74 1.05 -0.57 -1.21 0.21 0.07 -0.76 -1.65 -0.98 -0.77 -1.18 -1.41 -1.54 -1.6 -2.55 1.12
Solyc08g080540.3.1 (Solyc08g080540.3)
-0.2 -3.26 -1.64 -2.8 1.25 -1.45 1.49 -2.92 -1.26 -0.91 -1.84 1.0 0.3 2.53 -1.33 -0.91 -1.02 -1.81 -2.14 1.13 0.67 -0.63 0.31 0.36 -0.46 -0.17 0.01 0.06 -0.62 -0.54 -1.21 -1.02 -3.94 0.8
Solyc09g074240.1.1 (Solyc09g074240.1)
0.23 -2.39 -0.04 -0.26 0.12 -0.17 -0.11 -0.48 -0.4 -0.21 0.71 0.99 1.59 1.3 -1.22 -1.29 -0.88 - - -0.44 -0.02 -0.01 -0.04 -0.0 -0.39 -0.28 0.61 0.38 0.04 0.2 0.19 -0.45 -1.42 0.68
Solyc10g009110.1.1 (Solyc10g009110.1)
0.85 -4.23 -1.34 -3.06 -1.48 -0.02 -4.59 -4.86 -1.85 -1.18 0.7 1.67 0.79 2.62 -1.27 -2.12 -1.71 -2.04 -1.13 -0.65 0.05 0.31 0.69 0.59 -0.08 -0.99 -1.17 -1.05 -0.41 -0.7 0.12 0.15 -3.57 1.64
Solyc10g009120.2.1 (Solyc10g009120.2)
0.98 -4.58 -1.83 -4.05 -2.42 -0.8 -5.58 -6.74 -1.87 -3.43 0.81 1.63 0.74 2.46 -1.65 -2.71 -2.3 -1.95 -1.75 -0.55 0.65 0.41 0.67 0.54 -0.16 -1.98 -1.25 -1.12 -0.39 -0.55 0.07 0.08 -4.48 2.32
Solyc10g079755.1.1 (Solyc10g079755.1)
-0.22 -3.0 -1.0 -1.16 -0.09 0.56 -0.3 -1.52 -0.08 -0.09 1.13 1.08 1.07 0.57 0.24 0.48 0.54 -10.65 -12.05 -0.13 0.28 -0.06 -0.05 0.08 -0.18 -0.49 -0.43 -0.11 -0.12 0.06 -0.23 -0.0 -1.01 1.0
Solyc10g081040.1.1 (Solyc10g081040.1)
0.59 -4.29 -1.01 -3.7 -2.38 -1.0 -1.82 -3.63 -1.74 -2.17 1.13 2.68 0.65 2.57 -1.91 -3.03 -2.23 -10.53 -11.6 0.72 -0.58 -0.01 0.98 0.63 -0.97 -0.52 -1.24 -1.69 -1.43 -1.66 0.14 -1.36 -3.7 1.34
Solyc10g085590.1.1 (Solyc10g085590.1)
1.9 -1.38 -0.29 -0.39 -1.4 -0.76 -0.21 -1.45 -0.27 -0.71 -0.22 0.02 0.09 0.67 -0.19 -0.32 -0.19 -3.98 -3.09 1.1 -0.27 -0.11 0.3 0.28 -0.4 0.22 -0.02 -0.1 -0.36 -0.53 -0.33 -0.63 -1.05 1.94
Solyc11g012980.1.1 (Solyc11g012980.1)
0.53 -4.46 -4.73 -1.87 -3.17 -4.62 -5.49 -5.55 -5.02 -3.87 -1.37 2.36 1.4 4.0 -2.37 -2.49 -1.76 - - -0.88 -1.08 -2.13 -1.36 -1.71 -2.54 -2.78 -1.23 -1.66 -1.11 -1.81 -0.63 -1.73 -6.99 1.23
Solyc12g009240.1.1 (Solyc12g009240.1)
2.84 -8.95 -1.59 -6.16 -5.16 -2.52 -9.35 -10.47 -3.61 -5.55 0.44 0.87 0.11 1.68 -0.32 -0.9 -0.06 - -10.01 -1.45 -5.28 0.23 1.78 1.64 -0.92 -3.64 -0.37 -0.97 -1.71 -2.6 0.16 -2.41 -7.78 2.22

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.