Heatmap: Cluster_100 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
-0.04 0.1 0.12 -0.09 -0.48 -0.28 -0.02 -0.13 0.1 -0.05 -0.22 -0.07 -0.09 -0.01 0.12 -0.05 -0.25 -0.02 0.15 0.06 1.0 -2.93 0.55 0.14 0.1 -0.15
0.04 -0.01 -0.03 -0.16 -0.17 -0.07 -0.1 -0.11 -0.09 -0.35 -0.47 -0.4 0.18 0.28 0.5 0.29 0.04 0.1 0.23 0.03 1.17 -0.27 0.1 -0.62 -1.08 -0.65
-0.08 -0.28 -0.14 -0.16 -0.27 -0.27 0.15 0.27 0.05 0.01 -0.15 -0.21 -0.16 0.05 0.37 0.08 0.14 0.01 0.01 0.11 0.81 -0.59 -0.1 -0.07 -0.39 0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.