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Heatmap: Cluster_45 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
0.82 -0.55 -0.65 -0.35 -0.45 -0.96 -0.52 -0.63 -0.4 -0.36 0.04 0.69 0.94 0.15 0.05 -0.33 -0.69 -0.11 -0.46 -0.44 -1.95 0.94 0.24 -0.11 0.81 0.54
1.65 -0.83 -3.73 -1.85 -0.72 -0.53 0.55 0.51 0.01 -0.13 -0.02 -0.51 1.27 -1.11 -2.0 -2.05 -1.57 -0.63 -0.85 -1.31 -1.71 1.49 0.4 1.09 0.73 -0.68
0.23 -0.83 -0.44 1.18 1.35 0.27 0.02 0.55 -0.74 -0.84 -0.21 -0.94 -0.77 -1.74 -2.99 -2.68 -3.35 -1.42 -2.77 -1.65 -2.31 1.94 0.66 -0.69 1.19 0.9
0.6 -0.13 -0.46 -0.43 -0.69 -0.89 -0.38 -0.24 -0.38 0.11 0.44 0.7 0.91 0.32 -0.22 0.38 0.11 0.16 -0.54 -0.27 -2.38 0.83 -1.23 -0.21 0.4 -0.1
-0.05 -0.37 -0.13 0.49 -0.07 -0.94 -0.21 0.44 -0.19 0.39 0.14 0.01 0.55 -0.02 -0.76 -0.33 -1.27 -0.45 -0.58 -0.65 -1.2 1.69 -0.78 -0.64 0.5 0.43
1.63 0.53 0.08 0.09 -1.57 -2.38 -1.31 -0.22 -0.61 -0.45 0.1 0.04 1.15 -1.94 -1.44 -2.41 -2.35 -0.36 -0.53 -1.74 -4.42 1.1 -0.17 0.28 1.68 0.63
0.57 0.08 -0.21 -0.17 -0.57 -1.01 -0.88 -0.84 -0.88 -0.49 -0.19 -0.01 0.52 0.15 0.44 0.41 -0.25 -0.28 -0.41 -0.9 -1.82 0.85 0.36 0.33 0.99 0.6
0.58 0.15 -0.05 -0.22 -0.72 -1.34 -0.77 -0.68 -0.83 -0.49 -0.17 0.11 0.67 0.26 0.4 0.5 -0.15 -0.14 -0.55 -0.71 -2.03 0.74 0.14 0.43 0.84 0.42
1.07 0.71 0.11 -0.15 -0.25 -0.41 -0.04 0.16 -0.59 -0.53 -0.44 -0.33 1.08 -1.68 -1.3 -1.55 -0.66 0.24 -0.55 -0.3 -4.39 0.35 -0.98 -0.9 1.82 0.41
0.68 0.16 0.07 0.27 -0.27 -0.6 -0.14 0.18 -0.59 -0.03 0.3 0.58 1.08 -0.05 -0.47 -0.45 -0.3 -0.59 -1.02 -1.22 -3.12 0.86 -1.25 0.21 0.55 0.27
1.45 -0.38 -0.51 -0.67 -1.21 -1.89 -1.16 -0.84 -2.14 -1.02 -0.21 0.83 1.99 0.2 -0.47 -0.02 -0.69 -0.84 -1.51 -1.25 -0.1 1.78 -1.33 -0.72 0.15 -0.29
1.54 -0.33 -0.85 -0.72 -1.09 -1.55 -0.98 -0.77 -1.87 -1.19 -0.04 0.75 2.09 -0.05 -0.7 -0.2 -0.79 -1.15 -1.23 -1.2 0.01 1.67 -1.63 -0.63 0.21 -0.06
0.72 -0.28 -0.28 0.43 -0.23 -0.78 -0.25 0.11 0.41 0.55 0.69 0.7 1.22 -0.92 -1.47 -1.44 -0.44 -0.61 -1.27 -1.62 -3.39 1.3 -1.72 -0.5 0.77 -0.06
1.67 0.56 -0.07 -0.51 -1.46 -1.91 -1.63 -1.42 -1.85 -1.31 0.08 1.04 2.06 -0.02 -0.26 -0.14 -0.22 -0.67 -0.9 -1.73 -1.9 1.38 -2.21 -0.97 0.18 -0.69
0.39 -0.11 -0.32 -0.14 -0.19 -0.45 0.28 0.26 -0.11 0.36 0.35 0.33 0.62 -0.19 -0.51 -0.51 0.14 0.01 -0.42 -0.38 -2.58 1.1 -0.93 -0.38 0.41 -0.13
0.59 0.29 0.13 0.08 -0.47 -0.76 -0.54 -0.6 -0.57 -0.19 0.14 0.62 0.54 -0.0 -0.52 -0.28 -0.47 -0.36 -0.5 -0.59 -2.0 0.77 0.02 0.7 0.64 0.38
0.65 0.15 0.13 0.2 -0.24 -0.59 -0.13 0.17 -0.18 0.03 0.08 0.15 0.66 -0.21 -0.58 -0.17 -0.23 -0.23 -0.4 -0.35 -1.66 0.8 -0.77 -0.68 0.78 0.27
0.45 -0.07 -0.37 1.33 0.82 -0.54 -0.18 0.19 -0.9 -0.86 -0.39 -0.68 0.64 -2.32 -2.58 -1.87 -3.48 -1.17 -2.0 -1.78 -1.75 2.0 0.16 -0.5 1.26 0.74
0.87 -0.52 0.08 0.58 0.44 0.15 -0.14 0.22 0.63 0.15 0.58 0.72 0.35 -2.46 -2.45 -1.64 -2.35 -1.82 -1.11 -2.14 -2.27 0.77 0.44 0.38 0.85 0.11
1.44 0.05 -1.15 -0.33 -1.77 -2.29 -0.64 0.0 -0.46 -0.08 0.04 0.04 1.15 -0.61 -0.89 -0.53 -1.85 -1.2 -1.39 -1.31 -2.9 1.62 -0.0 0.47 1.39 0.39
0.76 0.17 -0.21 -0.07 -0.15 -0.48 -0.06 -0.0 -0.47 -0.24 -0.16 -0.07 0.95 -0.44 -0.9 -0.42 -0.45 -0.07 -0.78 -0.64 -1.89 0.94 -0.58 -0.43 1.39 0.37
0.22 -0.26 -0.31 -0.35 -0.19 -0.27 -0.02 0.22 0.14 0.34 0.44 0.68 0.52 -0.11 -0.4 0.0 -0.29 0.0 -0.39 -0.32 -1.69 0.73 -0.04 -0.43 0.2 -0.15
1.29 0.64 -0.26 -0.11 -1.18 -1.46 -0.97 -0.6 -0.89 -0.23 0.02 0.34 1.2 -1.16 -1.43 -1.22 -0.78 -0.23 -0.54 -0.86 -2.27 1.68 -0.98 0.23 0.71 0.72
0.82 0.23 0.21 0.02 -1.39 -2.36 -1.37 -0.34 -1.02 -0.19 0.17 0.65 1.04 -0.71 -1.47 -1.13 -1.41 -1.17 -1.38 -0.93 -3.76 1.72 -0.94 -0.19 1.32 1.37
1.08 0.49 0.52 0.25 -0.98 -1.52 -0.59 0.06 -1.26 -0.78 -0.42 -0.16 1.53 -0.33 0.14 -0.41 -0.09 0.06 -0.59 -0.41 -1.75 1.21 -1.23 -1.35 0.2 0.2
0.88 0.11 0.07 0.22 0.16 -0.1 0.08 -0.04 -0.62 -0.6 -0.51 -0.3 1.02 -0.18 -0.41 -0.28 -0.47 0.11 -0.47 -0.58 -0.51 1.12 -0.64 -0.7 0.3 -0.09
0.69 0.25 0.3 0.66 -0.02 -0.96 -0.42 -0.07 -0.32 -0.29 0.1 0.48 1.07 -0.67 -0.52 -0.66 -0.52 -0.14 -0.57 -0.33 -2.19 0.91 -0.83 -0.62 0.18 0.62
1.16 0.53 -0.01 -0.14 -0.82 -0.98 -0.4 -0.07 -0.09 0.57 0.89 1.14 1.41 -1.2 -1.72 -1.92 -1.41 -0.27 -1.61 -1.06 -1.81 1.47 -2.48 -1.33 0.09 -0.38
1.36 -0.33 -0.57 -0.05 0.51 0.31 0.22 0.66 -1.01 -0.99 -0.83 -1.22 0.63 -0.79 -1.79 -2.3 -1.44 -0.76 -0.27 -1.24 -1.73 1.5 -1.57 -0.09 1.35 0.87
1.03 0.36 0.02 0.02 0.13 0.38 0.58 0.56 -0.94 -0.77 -1.34 -1.7 0.69 -0.48 -0.93 -0.97 -0.91 -0.51 -0.65 -0.59 -1.62 1.54 -1.04 -0.43 1.24 -0.41
0.68 0.07 -0.4 0.46 0.47 -0.04 0.0 0.06 0.52 0.2 0.57 0.68 0.73 -1.18 -1.3 -1.31 -1.37 -0.89 -0.95 -1.03 -3.63 0.84 0.52 -0.13 0.32 -0.27
1.12 -0.02 0.12 -0.05 -0.93 -2.03 -0.9 -0.51 -1.86 -0.85 -0.28 0.45 1.58 -1.66 -1.99 -1.7 0.23 -0.74 -1.27 -0.89 -0.43 2.19 -0.9 -0.98 0.45 0.53
0.69 -0.53 -1.5 0.14 -0.83 -0.9 -0.45 0.25 -0.17 0.23 0.18 0.22 0.67 -0.45 -1.41 -0.43 -1.29 -1.05 -1.92 -1.29 -2.19 1.33 0.47 -0.22 1.59 0.89
0.8 0.5 0.18 0.92 0.53 0.48 0.42 0.22 -0.13 -0.39 0.1 0.62 1.08 -3.12 -2.85 -2.63 -2.52 -2.1 -2.07 -1.73 -2.04 0.77 -0.66 0.13 1.08 -0.13
0.56 0.1 -0.16 -0.17 0.0 -0.25 0.06 0.12 -0.0 0.17 0.39 0.69 0.97 -0.14 -0.48 -0.28 -0.71 -0.22 -0.42 -0.6 -2.84 0.79 -0.54 -0.43 0.18 -0.14
1.35 -0.02 -1.21 -1.1 -1.95 -1.12 -0.44 0.23 -0.44 -0.13 -0.19 0.07 0.88 -0.93 -1.04 -0.8 -0.83 -0.54 -0.45 -1.24 -1.69 0.61 0.83 1.35 0.93 0.55
0.21 -0.34 -0.39 -0.44 -0.06 -0.0 0.08 -0.05 0.24 0.14 0.38 0.55 0.5 0.16 -0.24 0.12 0.2 -0.2 -0.11 -0.33 -0.97 0.85 -1.33 0.13 -0.48 -0.32
0.69 0.27 0.36 0.46 -0.1 -0.86 -0.53 0.1 -0.5 -0.13 0.28 0.83 0.8 -0.78 -1.12 -1.41 -0.74 -0.6 -0.72 -0.88 -2.21 1.06 -0.66 -0.37 1.08 0.36
0.03 -0.52 -0.47 0.03 -0.02 -0.05 0.72 0.66 0.3 0.13 0.3 0.15 0.58 -0.11 -0.96 -0.27 -1.06 -0.46 -1.07 -0.97 -1.26 1.02 -0.32 -0.14 0.42 0.3
0.52 0.13 0.25 0.43 0.37 0.27 0.02 -0.0 -0.1 -0.04 0.23 0.57 0.7 -0.57 -0.83 -0.72 -0.71 -0.23 -0.74 -0.95 -1.98 0.48 0.43 -0.23 0.03 -0.1
0.99 0.1 -0.25 -0.2 -0.57 -0.47 -0.51 -0.29 -0.37 -0.12 0.05 0.88 1.17 -1.18 -1.18 -0.38 -0.5 -0.13 -0.43 -1.14 -2.38 1.74 0.02 -1.02 0.23 -0.28
1.0 0.32 0.35 0.27 -0.18 -0.61 -0.17 0.23 -0.52 -0.52 -0.43 -0.3 0.96 -0.38 0.19 -0.03 -0.2 0.3 0.16 -0.2 -1.52 0.24 -1.4 -0.75 0.17 0.22
0.6 -0.02 -0.22 -0.08 -0.25 -0.38 0.21 0.31 -0.06 0.12 0.35 0.33 0.9 0.22 -0.84 -0.27 -0.62 -0.07 -1.08 -0.53 -2.11 0.89 -1.08 -0.62 0.33 0.55
0.93 0.29 0.05 0.14 -0.19 -0.45 0.15 0.24 -0.54 -0.43 -0.36 -0.53 0.75 -0.22 -0.17 -0.46 -0.32 0.09 -0.2 -0.54 -3.34 0.38 -0.66 -0.84 1.36 0.27
0.86 0.73 0.47 0.08 -0.32 -0.51 -0.09 0.16 -0.36 -0.31 -0.15 0.09 0.95 -0.64 -0.87 -0.77 -0.53 -0.45 -0.77 -0.71 -2.72 0.63 -0.5 -0.47 1.31 0.04
1.95 0.18 -0.87 -2.0 -3.71 -3.9 -1.73 -0.78 -1.63 -0.48 0.37 1.1 2.01 -1.0 -1.42 -1.24 -1.35 -0.43 -1.05 -1.17 -0.97 1.54 -1.99 0.07 0.64 0.07
1.14 0.15 -0.03 -0.47 -1.67 -2.87 -2.03 -1.29 -1.4 -0.72 0.2 0.84 1.43 0.86 -0.04 0.21 -0.34 -0.42 -0.92 -0.87 -1.74 1.47 -1.15 0.34 0.09 -0.22
0.76 -0.4 -0.93 0.05 -0.32 -1.07 -0.99 -0.33 -0.27 0.41 0.43 0.21 0.89 -1.64 -2.86 -0.99 -1.34 -1.01 -1.52 -0.96 -2.33 1.24 0.73 0.86 1.51 0.4
1.75 0.69 0.44 1.15 0.01 -1.25 -0.92 -0.36 -1.97 -2.1 -1.56 -1.01 1.74 -0.85 -2.41 -1.11 -2.2 -1.78 -1.99 -1.78 -0.44 1.6 -1.59 -1.08 0.68 0.71
0.59 0.49 0.33 0.27 0.22 -0.21 -0.22 -0.27 -0.8 -0.79 -0.71 -0.46 0.69 -0.36 -0.66 -0.22 -0.28 0.26 -0.33 -0.25 -2.57 0.61 -0.9 -0.89 1.41 0.55
0.57 -0.15 -0.39 -0.19 -0.06 -0.07 0.27 0.34 0.29 0.19 0.41 0.49 0.68 0.17 -0.19 -0.22 -0.3 -0.13 -0.24 -0.65 -1.89 0.88 -0.84 -0.52 -0.56 -0.39
1.37 0.62 0.05 0.52 -0.22 -1.36 -0.62 -0.01 -1.41 -0.64 0.16 0.61 1.28 -2.27 -2.97 -2.66 -2.97 -1.68 -1.82 -1.39 -1.74 1.55 -1.82 0.03 0.93 1.25
1.49 0.58 0.09 0.93 0.08 -1.36 -0.94 -0.29 -1.18 -0.72 -0.03 -0.15 0.61 -3.56 -1.67 -2.55 -1.21 -0.37 -0.61 -0.59 -4.85 1.16 -1.9 0.29 1.2 1.22
0.42 -0.59 0.21 1.5 0.71 -0.38 -0.5 0.08 -1.99 -1.21 -0.84 -0.63 1.23 -0.64 -2.25 -1.6 -1.5 -2.01 -2.02 -1.79 -3.2 2.28 -1.21 -2.11 1.05 0.69
0.7 0.06 0.19 0.51 0.34 -0.07 -0.08 -0.1 -1.08 -0.89 -0.57 -0.14 1.04 -0.43 -0.76 -0.34 -0.87 -0.8 -0.93 -0.95 -1.8 1.58 -1.35 -0.71 1.14 0.31
0.91 -0.29 -0.44 -0.42 -0.78 -1.28 -0.18 -0.45 -0.17 0.08 0.26 0.37 0.96 -0.56 -1.06 -0.87 -1.18 0.34 -0.23 -0.8 -2.91 1.68 -0.36 -0.13 0.97 -0.01
1.13 0.03 0.02 0.08 -0.2 -1.0 -0.74 -0.21 -0.12 -0.28 0.15 0.13 1.17 -0.84 -0.29 -0.81 -0.98 -0.29 -0.69 -1.61 -1.08 1.64 -0.14 -0.77 0.3 0.22
1.39 -0.11 -0.9 -0.43 -0.7 -0.72 0.26 0.56 0.0 0.02 0.17 0.01 1.1 -1.08 -1.16 -1.34 -1.39 -0.62 -0.52 -1.34 -3.2 1.53 -0.22 -0.6 1.09 -0.15
1.6 0.42 0.36 1.12 -0.18 -1.64 -1.19 -0.44 -1.92 -1.67 -0.76 -0.27 1.6 -2.42 -3.2 -2.51 -2.87 -2.12 -2.36 -2.14 -0.32 1.23 -1.18 -0.2 1.49 1.17
-0.06 -0.28 -0.15 1.44 1.09 -0.28 -0.19 -0.36 -0.76 -0.95 -0.14 -0.27 -0.11 -0.82 -1.53 -0.69 -1.67 -1.08 -1.46 -2.08 -0.89 1.6 0.34 -0.27 1.45 -0.16
1.67 0.3 -0.98 -0.77 -1.81 -2.5 -0.76 -0.57 -0.5 -0.25 0.25 0.54 1.93 -1.69 -1.44 -0.85 -3.89 -0.67 -0.9 -1.73 -2.22 1.05 0.5 1.06 0.58 -0.49
1.49 -1.69 - - -1.37 -1.06 0.15 0.67 -0.15 -0.26 -0.05 -1.4 0.6 -2.49 -2.59 -1.98 -0.96 -0.83 -1.33 -2.08 -3.18 2.24 1.11 0.49 1.65 -0.24

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.