Heatmap: Cluster_310 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g086960.3.1 (Solyc01g086960.3)
1.05 -3.14 0.02 -1.2 1.03 -0.42 -1.52 -1.97 -0.96 -0.66 1.29 2.03 0.42 1.22 -1.1 -1.02 -0.77 -2.73 -1.51 1.18 -0.05 -0.54 -0.49 -0.47 -1.03 0.34 -1.12 -0.91 -0.9 -0.79 -0.59 -0.55 -1.97 1.47
Solyc01g088560.3.1 (Solyc01g088560.3)
-0.28 -0.07 -0.22 1.2 -0.2 -0.57 -0.42 -0.19 -0.08 -0.68 -0.86 -0.35 -0.89 -0.9 -0.05 -0.4 -0.46 -3.0 -1.52 0.01 -0.1 0.58 0.56 0.66 0.64 -0.05 0.43 0.5 0.38 0.64 0.47 0.47 -1.01 0.13
Solyc01g095140.3.1 (Solyc01g095140.3)
1.06 1.92 -4.29 -0.73 -2.8 -0.2 -9.3 -4.02 -1.72 -3.7 1.53 2.1 1.45 1.24 -2.93 -3.37 -1.98 - - 1.47 1.08 -0.98 -0.73 0.24 -2.35 -2.22 -1.6 -1.65 -3.14 -3.29 -1.99 -1.81 1.29 0.85
Solyc01g098525.1.1 (Solyc01g098525.1)
0.81 -2.98 -0.46 -2.01 -1.31 -0.39 -0.11 -0.98 -2.46 0.8 -0.22 -0.51 0.52 1.03 -2.64 -3.4 -2.42 -3.18 -5.31 1.79 0.78 -0.09 -0.51 -0.15 -0.08 1.0 0.46 0.65 0.44 0.21 0.37 0.98 -5.18 0.66
Solyc01g103470.2.1 (Solyc01g103470.2)
-0.98 -1.41 -5.18 0.38 -1.66 -1.14 -3.33 -1.76 -1.6 -2.54 1.46 2.38 2.52 3.26 -1.7 -4.64 -3.45 -9.19 -7.35 -4.42 -1.77 -2.36 -2.39 -1.88 -1.88 -1.96 -0.18 0.06 0.47 -1.6 -1.54 -1.7 -3.81 -1.07
Solyc01g105410.3.1 (Solyc01g105410.3)
0.51 -3.38 0.89 -3.68 0.36 -1.35 0.74 -3.53 -1.38 -0.96 1.87 1.99 2.31 2.13 -0.33 -0.68 -0.58 -11.88 -12.85 -1.02 0.19 -2.65 -2.25 -1.81 -2.35 -1.02 -3.06 -3.15 -2.1 -2.8 -1.82 -1.66 -0.25 1.1
Solyc01g109110.3.1 (Solyc01g109110.3)
2.42 -0.83 -0.43 -2.75 -1.23 -0.11 -0.8 -3.93 -1.07 -1.25 -0.37 0.73 -1.17 -0.42 -3.39 -7.77 -5.19 - -8.24 2.87 0.85 -1.15 -3.02 -1.98 -1.7 2.06 -2.86 -1.55 -1.16 -1.35 -1.25 -0.55 -3.37 1.84
Solyc01g109890.3.1 (Solyc01g109890.3)
-0.06 -0.6 0.8 1.01 1.0 -0.46 -1.56 -0.67 -0.33 -0.53 -0.4 -0.11 -0.57 -0.39 -0.43 -0.53 -0.33 -2.95 -2.93 0.59 0.48 0.22 -0.27 0.01 -0.05 -0.3 0.44 0.72 0.55 0.47 0.23 0.62 -2.84 0.51
Solyc02g014840.3.1 (Solyc02g014840.3)
2.26 -1.29 1.17 -0.7 -2.07 -0.57 -1.65 -0.94 -0.16 -0.08 1.03 0.98 0.36 0.98 -1.11 -1.03 -0.87 -5.34 - -0.77 -5.09 -0.54 0.92 0.71 -1.19 -0.72 -0.48 -0.68 -1.24 -1.3 -0.27 -1.1 -2.78 2.02
Solyc02g062380.2.1 (Solyc02g062380.2)
0.58 -1.47 0.52 -0.59 0.31 0.03 -0.02 -0.71 -0.16 0.33 0.33 0.07 0.35 0.14 0.56 1.05 0.72 -4.31 -2.28 -0.33 0.15 0.05 -0.15 -0.34 -0.55 0.78 -0.44 -0.14 -0.2 -0.18 -0.07 0.03 -3.41 0.49
Solyc02g068430.3.1 (Solyc02g068430.3)
-0.1 -0.74 -0.18 0.19 1.73 0.05 -0.35 -1.19 0.1 -0.06 0.37 0.56 0.49 0.37 -0.39 -0.64 -0.64 -1.69 -1.03 0.03 0.66 -0.14 0.03 0.18 0.16 0.08 -0.27 -0.19 -0.16 -0.34 -0.31 -0.13 -2.38 0.46
Solyc02g084117.1.1 (Solyc02g084117.1)
0.11 -0.8 -0.96 -4.91 0.68 0.7 0.28 0.4 -0.32 0.98 -0.78 -0.41 0.11 -0.72 -0.41 0.0 -0.6 -5.88 - 2.53 0.55 -0.01 -0.7 -0.59 -1.26 -0.44 0.34 0.05 -0.18 -0.38 0.47 0.3 -4.67 -0.88
Solyc02g088630.3.1 (Solyc02g088630.3)
0.38 -0.17 1.07 1.61 -0.35 -0.36 0.23 -0.3 0.05 0.11 -0.01 -0.08 -0.04 0.62 -0.19 -0.38 -0.03 -0.18 -2.04 -0.13 0.49 -0.49 -0.07 0.3 -0.16 -0.36 -0.84 -0.79 -1.08 -0.77 -0.46 -0.79 -1.43 1.02
Solyc02g091500.1.1 (Solyc02g091500.1)
0.95 -1.51 -0.31 -0.55 1.62 0.67 -0.53 -1.85 -0.31 -1.05 0.59 1.46 -0.09 1.82 -0.23 -0.24 -0.36 -4.34 -5.41 0.99 -1.41 -0.4 0.56 0.41 -1.66 -1.39 -1.52 -1.83 -2.08 -2.37 -0.77 -1.66 -1.64 1.64
Solyc02g094000.1.1 (Solyc02g094000.1)
3.3 -4.93 -2.87 -4.94 -5.16 -0.84 -7.17 -6.67 -2.16 -2.17 0.38 0.03 0.07 2.18 -2.43 -4.35 -3.62 -5.54 -7.19 1.53 -0.27 -0.7 0.23 0.61 -1.58 -0.76 -0.83 -0.85 -1.26 -3.17 -1.48 -2.67 -5.02 2.18
Solyc03g082520.1.1 (Solyc03g082520.1)
3.37 -1.98 -2.82 -4.79 -1.69 0.81 - -1.96 -1.64 -2.38 -0.19 -0.12 0.82 -0.19 -1.75 -2.51 -1.88 -5.46 - 0.75 -1.87 -1.77 -1.86 -1.5 -1.85 0.43 0.78 -0.14 -0.46 -0.89 -0.87 -1.73 -0.91 2.44
Solyc03g082530.1.1 (Solyc03g082530.1)
2.42 0.36 -2.34 -1.21 -4.56 0.64 -7.05 -4.26 -1.43 -1.92 -2.43 1.28 -1.78 1.41 0.09 0.73 2.25 -7.83 - 1.91 -2.04 -1.3 -0.33 -0.6 -2.03 -0.33 -1.41 -2.49 -2.05 -3.55 -1.31 -2.88 -3.47 1.58
Solyc03g113995.1.1 (Solyc03g113995.1)
3.38 - 0.04 -2.45 -1.81 -0.6 -2.72 -2.66 -2.95 -0.13 0.84 0.12 1.28 1.21 -2.78 -3.24 -1.45 -6.15 -5.95 -1.67 -1.15 -0.9 0.74 0.11 -2.24 -1.22 -0.56 -1.2 -1.85 -1.33 -1.03 -1.93 -6.77 2.18
Solyc03g117210.3.1 (Solyc03g117210.3)
1.34 0.56 0.38 -0.3 -0.39 0.22 1.57 -1.39 -0.11 -0.79 0.6 1.46 0.58 1.88 -1.33 -1.94 -1.14 -7.42 -7.08 -0.43 -0.31 -0.49 -0.12 -0.46 -0.66 -1.44 -1.76 -1.58 -1.05 -1.14 -1.01 -0.15 -3.07 1.35
Solyc03g118810.1.1 (Solyc03g118810.1)
2.27 0.31 0.37 -0.33 -1.59 0.33 -0.61 -1.19 -0.11 0.26 0.81 0.99 1.07 1.95 -0.42 -1.69 -1.16 -10.74 -10.6 -0.73 -1.25 -1.09 -0.83 -1.34 -2.41 -3.06 -1.96 -2.44 -2.14 -2.45 -0.63 -1.37 0.55 1.9
Solyc03g121360.1.1 (Solyc03g121360.1)
0.85 -1.36 -0.4 -0.94 -0.84 -0.7 0.4 -1.04 -0.03 -0.51 0.5 0.81 0.5 1.25 0.17 0.16 0.31 -3.51 -3.79 0.93 0.48 -0.07 0.05 0.14 -0.35 -0.32 -0.22 -0.25 -0.33 -0.3 -0.02 -0.34 -0.86 0.73
Solyc04g005480.1.1 (Solyc04g005480.1)
0.67 -3.28 -0.22 -1.43 -0.31 -0.97 -2.11 -2.57 -0.99 -2.06 1.31 1.59 0.81 1.52 -0.78 -0.44 -0.23 -6.6 -7.66 2.32 -0.08 -0.41 0.2 0.1 -1.02 -0.04 -0.41 -0.86 -1.3 -1.46 -0.2 -1.54 -1.92 1.26
Solyc04g072900.1.1 (Solyc04g072900.1)
0.85 0.48 -1.04 -1.3 -1.5 -1.18 0.24 -1.65 -0.89 -0.31 1.47 1.22 1.97 2.2 -0.89 -1.58 -1.68 - -14.36 0.07 -0.56 -0.68 -0.04 -0.17 -1.27 -0.16 -0.25 -0.35 -0.51 -1.05 -0.51 -1.22 -3.85 0.94
Solyc04g074270.3.1 (Solyc04g074270.3)
0.86 -2.26 -0.0 -0.61 0.73 0.29 -1.02 -0.57 0.09 0.55 -0.16 -0.61 -0.61 -0.41 -1.22 -0.79 -1.5 -2.52 -5.66 0.58 0.22 0.7 0.65 0.73 0.44 0.21 0.26 0.32 -0.1 0.0 0.21 -0.27 -1.93 1.37
Solyc05g006390.1.1 (Solyc05g006390.1)
3.32 -5.25 1.65 -0.75 -5.26 -0.05 -9.02 -3.0 -0.51 2.21 -2.56 -1.41 -1.77 -1.26 -0.27 0.22 0.08 -4.08 -8.43 0.04 -3.26 -2.27 -0.68 -1.35 -2.8 -0.5 -2.12 -2.63 -3.11 -3.18 -1.5 -1.68 -1.2 2.18
Solyc05g043217.1.1 (Solyc05g043217.1)
1.15 -0.93 -1.31 -2.09 -2.5 -0.36 1.46 -0.66 0.26 -0.28 1.08 0.7 0.85 0.74 0.06 0.32 -0.39 -6.81 - 0.39 1.07 -0.29 -0.25 -0.59 -0.5 -0.47 -0.57 -0.51 -0.54 -0.61 0.19 -0.4 -0.34 0.53
Solyc05g052050.1.1 (Solyc05g052050.1)
-0.18 -1.85 -1.56 -2.1 -0.16 -0.34 -2.61 -3.18 -2.26 -1.18 2.34 3.17 0.41 1.96 -1.57 -0.67 1.14 -3.38 -3.06 -0.29 0.46 -3.69 -2.49 -2.86 -3.4 0.26 -5.59 -4.8 -2.97 -4.81 -3.93 -2.68 -0.16 0.81
Solyc05g054170.3.1 (Solyc05g054170.3)
1.25 -1.09 -0.66 -0.52 -1.12 -0.67 -0.6 -1.82 -0.26 -0.24 -0.51 0.75 1.67 2.21 -1.0 -0.97 -0.69 -2.02 -0.65 0.43 0.11 -0.67 -0.36 -0.23 -0.49 -0.01 -0.22 0.11 0.32 -0.6 -0.6 -0.33 -2.22 0.56
Solyc06g050630.3.1 (Solyc06g050630.3)
1.29 -3.51 1.92 -0.62 2.13 -0.16 -1.98 -0.58 -0.13 -1.26 -0.91 1.51 -1.52 1.33 -0.37 -1.26 -0.72 -1.56 -0.99 1.81 -2.48 -1.94 0.07 -0.98 -2.93 0.21 -0.27 -1.36 -2.21 -3.06 -1.37 -4.22 -2.45 0.73
Solyc06g066800.2.1 (Solyc06g066800.2)
-1.07 -1.44 0.08 0.96 -0.9 -0.8 -2.39 -0.48 -0.24 -0.27 -0.97 -0.09 -1.65 0.0 -1.13 -1.91 -1.93 0.25 1.54 -1.32 -0.64 0.67 1.44 1.52 1.17 -3.02 0.04 -0.11 -0.12 0.01 0.28 -0.3 -1.13 0.72
Solyc06g068960.1.1 (Solyc06g068960.1)
-0.07 -0.75 0.48 -2.74 -2.11 0.7 -1.25 -0.07 1.43 1.1 1.89 1.13 -0.8 -1.37 -1.48 -1.82 -1.58 1.37 1.52 0.7 -0.34 -2.71 -1.59 -2.01 -2.45 -2.74 -2.42 -2.69 -2.75 -2.97 -2.03 -3.24 2.21 -0.97
Solyc06g075780.2.1 (Solyc06g075780.2)
2.63 -5.2 -3.67 -4.21 -3.65 -0.79 - -2.77 -1.96 -1.34 0.47 1.84 0.09 2.5 -0.77 -1.22 0.39 - - 1.89 -1.11 -1.27 -0.7 -0.87 -2.7 -1.61 -3.12 -2.97 -2.78 -3.55 -1.28 -1.81 -2.06 2.19
Solyc07g053165.1.1 (Solyc07g053165.1)
0.8 -0.83 -0.13 0.36 -0.03 -0.3 0.32 -0.77 -0.27 -0.35 0.2 0.79 0.81 1.11 -0.31 -0.19 -0.1 -4.04 -3.58 0.11 0.0 0.0 -0.04 -0.05 -0.07 0.08 -0.14 -0.06 -0.25 0.01 0.02 0.14 -1.24 0.5
Solyc07g053740.1.1 (Solyc07g053740.1)
1.27 -1.83 0.17 -1.88 -1.03 -0.11 -0.97 -3.71 -1.32 -1.74 1.55 1.84 1.59 2.25 -1.69 -2.53 -1.54 -8.75 -10.28 0.28 -0.58 -0.53 0.24 0.18 -1.3 -1.13 -1.21 -1.56 -1.89 -1.85 -0.41 -1.46 -2.38 1.89
Solyc07g062690.1.1 (Solyc07g062690.1)
2.1 -2.56 1.28 -2.28 -0.92 -0.77 -1.5 -1.31 -1.79 0.0 1.06 0.77 0.52 -0.83 -1.07 -0.62 -0.66 2.43 -3.28 -0.78 -0.0 0.99 0.31 0.23 -4.17 -2.76 -2.47 -2.74 -2.75 -3.71 -1.0 -1.1 -0.33 1.16
Solyc07g062700.3.1 (Solyc07g062700.3)
0.61 -1.11 0.39 0.08 -0.93 0.17 -1.25 -0.37 -0.7 -1.28 0.07 1.11 0.91 0.82 -1.9 -2.1 -2.0 -3.99 -9.0 0.73 0.12 0.2 0.65 0.41 -0.04 -0.56 0.08 -0.22 -0.37 -0.28 -0.09 -0.23 1.66 0.26
Solyc07g063940.2.1 (Solyc07g063940.2)
-0.03 -3.37 -2.38 -4.39 -2.85 -2.31 -2.77 -3.39 -1.23 -1.36 2.17 3.05 1.86 2.87 -0.56 -0.34 0.23 -11.85 - -1.02 -1.48 -2.0 -0.54 -1.52 -2.89 -2.01 -2.05 -2.71 -2.86 -2.77 -1.58 -2.23 -2.92 0.05
Solyc08g077680.3.1 (Solyc08g077680.3)
-0.29 -0.6 -0.24 -0.26 1.38 0.54 -0.4 -0.71 -0.21 0.69 -0.07 0.04 0.43 0.03 0.86 1.62 1.2 -0.22 0.4 0.91 -0.22 -1.61 -0.86 -0.99 -1.82 0.22 -1.16 -1.35 -1.61 -1.75 -1.36 -2.26 -2.28 0.47
Solyc09g010980.1.1 (Solyc09g010980.1)
0.47 -3.89 1.56 -0.4 -2.32 -1.59 -3.25 -1.8 -0.98 -5.47 0.93 2.18 0.1 2.74 -2.07 -2.77 -0.4 -4.33 -5.45 -0.25 -1.47 -0.75 0.69 -0.1 -1.32 -0.72 -0.55 -0.8 -0.72 -1.05 0.43 -0.98 -1.14 0.99
Solyc09g015040.1.1 (Solyc09g015040.1)
0.7 -0.65 0.62 0.81 0.2 -0.85 -1.02 -0.85 -0.91 -0.34 -0.29 0.18 -0.29 0.51 0.14 0.63 0.47 1.7 0.4 0.73 -0.36 -1.08 -0.47 -0.61 -1.53 -0.61 -0.61 -0.69 -0.91 -1.51 -1.32 -1.61 -0.16 1.33
Solyc10g011740.3.1 (Solyc10g011740.3)
1.13 -1.66 0.75 -0.19 -1.24 -0.74 -2.49 -1.68 -0.36 -0.77 -0.28 0.51 -0.68 0.83 0.05 1.03 2.28 -5.08 -4.15 0.59 -0.14 -0.45 -0.14 -0.18 -0.83 0.05 -1.1 -0.87 -0.51 -0.71 -0.26 0.21 -1.31 1.08
Solyc10g051080.1.1 (Solyc10g051080.1)
1.9 -1.96 -2.3 -3.3 -0.67 -0.61 -0.16 -1.6 0.69 0.21 -0.08 -0.41 1.66 1.79 0.22 0.1 0.11 -4.52 - -0.05 -0.65 -0.28 0.16 -0.27 -1.14 -2.02 0.17 -0.04 -0.06 -0.49 0.24 -0.76 -1.05 0.73
Solyc10g074740.1.1 (Solyc10g074740.1)
0.97 -1.73 1.19 1.07 -1.34 -1.26 -4.0 -2.66 -1.7 -1.12 -1.47 -1.84 -1.9 -1.59 2.15 2.35 2.19 -8.46 -9.14 0.47 -2.1 -0.88 -1.55 -0.75 -0.96 0.43 -2.11 -1.37 -0.87 -1.57 -1.64 -0.62 -1.55 1.28
Solyc10g085430.2.1 (Solyc10g085430.2)
1.36 -1.2 1.14 0.17 0.49 -0.2 -1.8 -1.15 -0.53 -0.09 -0.86 -0.17 -0.76 -0.07 -0.14 0.17 0.43 -1.15 -0.66 0.37 0.29 -0.08 -0.55 -0.15 -0.0 0.92 -0.69 -0.4 -0.15 -0.24 -0.28 0.1 0.05 0.68
Solyc12g005910.2.1 (Solyc12g005910.2)
0.23 -1.97 1.21 0.22 0.8 -0.16 -1.3 -1.14 -0.69 -0.43 -0.06 0.55 0.21 -0.19 -0.13 0.07 -0.08 -8.14 -10.92 0.43 0.94 -0.32 -0.39 -0.14 -0.14 -0.01 -1.07 -0.92 -0.56 -0.71 -0.62 0.04 1.29 1.5
Solyc12g010420.1.1 (Solyc12g010420.1)
2.35 - -1.14 -4.6 -3.06 -0.66 -8.37 -4.2 -3.01 -1.35 1.71 1.06 1.3 1.65 0.95 0.31 0.68 - - 0.96 -1.94 -0.38 -0.3 0.27 -1.79 -0.71 -0.71 -1.08 -2.78 -4.04 -0.91 -3.25 -0.82 1.56

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.