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Heatmap: Cluster_90 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
1.24 0.94 0.53 -0.05 -1.03 -1.26 -0.76 -0.45 -0.33 -0.19 -0.16 0.21 1.1 -0.98 -0.43 -0.96 -0.43 -0.01 0.33 -0.22 -0.65 -0.57 -0.23 0.49 0.11 -0.09
0.88 0.71 0.32 0.31 0.08 -0.58 -0.34 -0.38 -0.46 -0.4 -0.21 0.08 0.95 0.44 -0.96 0.28 -0.13 -0.27 -0.92 -0.49 -0.59 -0.15 -0.7 -0.2 0.45 -0.09
1.37 0.7 0.35 -0.21 -0.36 -0.98 -0.37 -0.18 -1.74 -1.22 -1.1 -0.41 1.53 -0.91 -1.42 -0.63 -1.23 -0.38 -0.09 -0.83 0.47 -2.24 -0.73 -1.93 1.94 0.39
0.59 -0.12 -0.4 -0.38 -1.1 -1.73 -0.73 -0.3 -0.37 -0.23 -0.11 -0.09 0.33 0.32 0.27 0.27 -0.14 0.69 0.42 -0.26 0.25 -0.93 0.84 -0.27 0.14 0.39
0.95 0.3 -0.07 -0.22 -0.44 -0.89 -0.72 -0.37 -1.21 -1.77 -0.84 -0.15 1.15 -0.55 -0.87 0.02 -0.94 -0.76 -1.23 -1.59 1.32 0.28 -0.32 0.02 1.69 0.13
1.32 0.1 -0.44 -0.26 -1.04 -2.13 -1.94 -0.71 -1.85 -0.88 -0.04 0.05 1.27 -0.52 -0.75 -0.3 -1.8 0.36 -0.22 0.03 -1.14 0.92 -1.15 0.58 1.39 0.65
1.15 0.58 0.83 0.76 -0.22 -0.76 -0.17 0.48 -0.56 -0.6 -0.42 -0.22 1.09 -1.06 -1.08 -1.21 -1.19 -1.1 -1.12 -0.51 0.29 -1.09 -0.37 -0.4 0.57 0.9
0.59 0.03 -0.1 -0.52 -0.98 -0.8 -0.64 -0.3 -0.5 -0.24 0.11 0.3 0.75 -0.23 0.06 -0.05 -0.75 0.72 0.64 -0.21 -0.03 -1.22 0.51 0.15 0.07 0.34
0.19 0.01 -0.25 -0.05 -0.15 -0.53 -0.07 -0.02 -0.23 -0.33 -0.22 -0.24 0.47 -0.28 -0.34 -0.16 -0.7 0.09 -0.42 -0.8 0.18 -0.02 0.38 -0.01 1.41 0.24
-1.98 - - 0.34 0.1 0.44 - -0.79 -1.69 -0.15 -0.14 -0.58 - -0.33 - - - - -0.34 - 2.13 -0.44 -0.65 - 3.05 1.62
-0.01 -0.16 -0.5 -0.45 -0.2 0.34 0.09 -0.29 -0.25 -0.3 -0.49 -0.13 -0.3 -1.04 -0.99 -1.16 -1.32 0.23 -0.74 -0.81 0.71 -0.5 0.66 1.47 1.09 0.64
0.79 0.6 0.4 0.28 -0.14 -0.8 -0.49 -0.09 -0.9 -0.9 -0.52 -0.17 1.0 0.16 -0.36 -0.13 0.2 -0.5 -0.4 -0.81 -0.19 0.05 -1.47 -0.84 1.05 0.6
0.56 0.43 0.18 0.19 -0.36 -1.3 -0.59 -0.2 -1.11 -0.97 -0.66 -0.36 0.78 0.03 -0.58 -0.2 0.06 -0.28 -0.73 -1.07 0.39 0.52 -0.95 -0.6 1.52 0.84
0.97 0.5 0.71 0.89 0.44 -0.17 0.15 0.43 -1.76 -1.4 -1.2 -0.8 1.07 -0.02 -0.73 -0.03 -0.92 -0.51 -0.98 -0.42 -0.22 -1.25 -0.84 -1.38 0.82 0.69
0.61 -0.18 0.11 0.19 -0.06 -0.41 -0.04 0.07 -0.15 -0.04 -0.05 0.2 0.52 -0.21 -0.38 -0.34 -0.17 0.11 -0.64 -0.05 -0.18 -0.46 -0.39 -0.27 0.55 0.63
0.96 1.03 0.63 0.12 -0.73 -1.1 -0.92 -0.29 -0.67 -0.7 -0.23 0.09 0.99 -0.85 -0.82 -0.61 -0.35 -0.37 -0.5 -0.57 -0.42 -0.08 -0.41 0.0 1.41 0.0
1.3 0.22 -0.26 -0.44 -0.86 -1.53 -0.46 0.0 -1.51 -0.33 -0.09 0.29 1.58 -0.23 -0.68 -0.39 -0.8 0.51 -0.41 -0.8 -0.28 -0.14 -0.49 -1.18 1.08 0.41
0.03 -0.62 -0.88 -0.13 -0.89 -1.31 -1.12 -0.69 -1.72 -1.5 -1.53 -1.22 0.1 0.08 -1.31 -0.64 -1.58 -0.5 -1.19 -1.35 1.3 -1.53 0.58 -0.43 2.8 1.23
0.92 0.6 0.63 0.44 -0.57 -1.18 0.0 0.44 -0.72 -0.59 -0.48 -0.4 0.77 0.09 -1.6 -0.24 -0.65 -0.1 -1.03 -0.4 0.11 -0.67 -0.57 -0.47 0.87 0.85
0.96 0.69 0.73 0.44 -0.52 -1.04 0.01 0.36 -0.62 -0.65 -0.58 -0.41 0.77 -0.01 -1.5 -0.33 -0.73 -0.34 -0.83 -0.42 0.01 -0.94 -0.7 -0.52 0.85 1.03
1.0 0.8 0.71 0.49 -0.45 -0.59 0.01 0.37 -0.55 -0.63 -0.62 -0.46 0.75 -0.1 -1.52 -0.51 -0.9 -0.35 -0.71 -0.37 -0.1 -0.83 -0.67 -0.69 0.83 0.96
1.04 0.08 0.24 -0.34 -2.21 -2.78 -1.33 -0.3 -1.82 -0.87 -0.2 0.09 1.17 -0.43 -0.46 0.31 -0.26 -0.19 -0.22 -0.4 0.24 -0.35 -1.52 -0.3 1.81 0.72
0.28 0.41 0.08 -0.22 -0.7 -1.32 -0.78 -0.37 -0.32 0.01 -0.12 -0.03 0.03 -0.39 -0.87 0.28 -0.14 0.56 0.38 0.17 -0.26 0.19 0.71 0.55 0.02 0.01
1.15 0.97 0.59 0.13 -1.35 -2.1 -1.68 -0.84 -0.78 -0.58 -0.0 0.38 0.98 -1.13 -1.09 -0.93 -0.17 -0.4 -0.62 -0.51 -1.84 0.41 -0.36 0.32 1.5 0.36
1.69 1.35 1.31 -0.1 -2.58 -4.37 -4.23 -1.95 -2.32 -2.63 -1.08 -0.91 0.93 0.85 -1.05 0.48 -0.33 -1.07 -0.86 -1.77 -0.19 -1.35 -2.53 -2.27 1.39 1.57
0.64 0.21 0.11 -0.21 -0.68 -1.06 -0.72 -0.26 -0.04 0.2 0.18 0.54 0.74 -0.6 -0.43 -0.28 0.12 0.11 -0.19 0.16 -0.58 -0.39 0.13 0.12 0.13 0.4
1.22 0.77 0.57 0.23 -0.55 -0.86 -0.21 0.24 -0.84 -0.73 -0.43 -0.23 0.94 -0.99 -1.31 -1.08 -0.82 -0.96 -0.86 -0.62 0.29 -0.92 0.08 -0.01 1.15 0.75
1.03 0.95 0.12 -0.34 -1.57 -1.43 -0.85 -0.17 -0.38 -0.28 -0.14 0.13 0.84 -0.19 -0.06 -0.45 -0.22 0.03 0.17 -0.48 -0.21 -1.28 0.49 -0.02 0.27 0.53
-0.13 -1.58 -2.36 0.39 -1.17 -0.27 0.08 0.11 -0.88 -1.98 -0.73 -0.39 -1.07 -1.53 -0.16 -1.25 -3.51 -0.5 -1.14 -0.77 1.22 -0.35 0.33 1.3 2.2 1.2
0.42 -0.15 -1.13 0.15 -0.01 -0.29 -0.07 -0.41 -2.29 -2.4 -1.63 -3.1 0.15 -1.11 -2.59 -1.62 -2.11 -0.23 -0.85 -1.73 1.7 0.33 0.05 -2.0 2.69 0.66
1.0 0.6 0.15 0.29 -0.04 -0.86 -0.9 -0.67 -1.2 -0.82 -0.63 -0.29 0.9 0.44 -0.3 -0.27 -0.06 -0.36 -0.61 -0.64 -1.34 0.67 -0.94 0.38 0.92 0.48
0.82 0.51 0.47 0.37 -0.01 -0.61 -0.7 -0.26 -1.05 -1.1 -1.19 -0.81 0.55 -0.63 -0.54 -0.23 -0.65 -0.19 -0.42 -0.65 0.29 0.26 0.01 -0.79 1.6 0.57
0.65 0.35 0.14 0.43 -0.16 -1.4 -1.16 -0.68 -1.25 -0.6 -0.09 0.28 1.02 0.36 -0.38 0.1 -0.54 -0.2 -1.11 -0.74 -0.25 0.51 -0.15 -0.15 0.78 0.64
0.82 0.85 0.28 0.09 -0.96 -1.87 -1.04 -1.49 -1.32 -0.71 -0.34 0.19 0.69 0.17 -0.06 -0.1 -0.07 0.32 0.31 -0.7 -0.96 1.12 -0.77 0.14 0.53 0.11
0.88 0.68 0.14 0.41 -0.64 -1.77 -1.35 -0.84 -1.0 -0.66 -0.05 0.18 0.69 0.07 -0.49 -0.15 -0.48 0.03 -0.01 -0.88 -1.13 0.77 -0.38 0.2 0.88 0.63
0.72 0.38 -0.2 -0.25 -0.92 0.06 -0.62 -1.08 -0.54 -0.17 0.14 0.15 1.19 0.08 -0.38 -0.67 -0.45 0.36 0.83 -0.05 -0.15 -1.55 -0.64 -0.12 0.15 0.54
1.48 -0.14 -0.03 0.06 -0.63 -1.44 -0.73 -0.24 -1.61 -0.78 -0.32 0.21 1.78 -0.21 -0.83 -0.77 -0.3 -0.3 -0.92 -1.32 0.02 -0.47 -0.65 -0.54 1.16 0.72
-0.4 0.01 -0.34 -0.59 -0.83 -0.75 -0.25 0.31 -1.61 -0.85 -0.39 0.05 0.64 -0.82 -1.42 -0.64 -0.59 -0.2 -0.78 -0.45 1.15 -1.55 0.55 -0.75 2.17 0.82
0.82 1.06 0.38 0.03 -0.38 -0.16 -0.53 -0.55 -0.88 -0.81 -0.81 -0.57 0.57 -0.49 -0.88 -0.28 -0.64 0.07 -0.04 -0.46 -0.04 0.45 0.3 0.21 0.84 -0.09
1.23 1.14 0.9 0.31 -0.86 -1.86 -1.24 -0.48 -0.99 -1.33 -1.11 -0.74 0.9 -0.74 -0.11 -0.61 -0.34 -0.28 -0.3 -0.23 0.11 -0.47 -0.03 -0.86 1.22 0.54
1.0 0.98 0.99 0.65 0.0 -0.58 -0.54 0.32 -0.16 -0.94 -0.59 -0.44 0.59 -1.67 -0.84 -1.29 -0.6 -0.39 -0.5 -0.07 -0.2 -1.26 -0.39 -0.95 1.29 0.23
1.19 0.23 -0.33 -0.58 -1.15 -1.43 -0.41 -0.24 -1.85 -1.29 -0.94 -0.68 1.48 -0.04 -0.25 0.03 -0.49 -0.16 -0.56 -0.91 0.25 -0.21 -0.07 -0.93 1.73 0.62
-1.48 -1.01 -0.84 -1.33 -1.05 -0.83 -0.53 -0.49 -1.07 -0.76 -0.71 -0.39 -0.72 -0.2 -0.69 0.07 -0.05 0.1 -0.2 -0.85 0.57 -0.34 0.99 0.63 2.4 0.67
0.66 0.26 0.05 0.07 -0.41 -0.58 -0.33 -0.37 -0.6 -1.16 -0.42 -0.11 0.67 -1.43 -1.05 -0.9 -1.35 -0.9 -0.94 -1.26 0.61 -0.32 0.55 1.11 1.58 0.67
0.77 0.79 0.03 0.02 -0.33 -0.56 -0.37 -0.14 -0.94 -0.69 -0.33 -0.01 0.76 -0.83 -0.63 -0.59 -0.32 -0.61 -0.02 -0.81 0.51 -0.27 0.12 0.19 1.12 0.3

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.