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Heatmap: Cluster_33 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
1.05 1.45 - 1.28 -0.9 - 0.79 0.87 0.24 - - -0.69 - - 0.53 - -0.83 1.09 0.43 0.51 0.8 - -1.46 0.68 0.55 -0.31
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - 3.01 - - - - - - - - - - 2.42 3.65 - - - - - - -
- -0.74 - 2.06 1.39 0.82 - - -0.33 1.18 -0.35 -0.23 -0.42 -0.48 - -0.34 - - 1.33 0.95 2.26 -0.57 - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 2.86 - - 2.37 3.76 - - - - - - -
-1.23 -1.29 -0.36 -0.77 -0.68 0.44 -0.73 -0.53 -0.52 -0.4 -0.31 -0.18 -0.9 0.44 0.12 -0.03 -0.05 0.41 1.52 0.21 -0.66 -1.08 0.23 0.8 0.42 0.8
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
0.29 0.18 -1.24 -1.17 -1.05 - -0.79 -1.22 -1.12 - - -1.15 -1.35 1.83 1.55 -0.26 0.55 1.06 2.67 -0.44 -0.41 - -0.62 - - -0.67
- - - - 2.4 - - - - - - - - - - - - 2.91 3.73 - - - - - - -
- - - - - - - - - - - 2.1 - - - - - - 4.24 - - - - - - 1.5
- - - - - - - - - - - - - - - - - - 3.98 - 3.35 - - - - -
- - - - - - - - - - - - - - - - - 2.31 4.39 - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - 1.25 - 1.45 - - 2.47 1.32 1.57 - 3.3 - - - - - - -
- - - - - - - - - - - - - - - - - - 3.98 - 3.35 - - - - -
2.58 - - - - - 3.09 - - - - - - - - - - - 2.53 2.51 - - - - - -
- 1.66 - 1.98 1.7 -0.09 0.35 -0.08 - -0.15 - - 1.76 -0.69 -0.35 -0.21 - - 1.13 -0.43 1.6 - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - 2.86 - - - - - - - - - - 2.26 2.49 - 1.86 - - - 2.23 -
- - 0.25 0.32 - - - - - - - - - - 1.08 0.23 - 0.89 3.48 - -0.2 - - 0.14 - 2.41
- - - - - - 2.84 - - - 0.31 - 2.27 - 0.12 - - - 3.55 - - - - - - -
-1.99 - - -0.1 - - - - -1.7 -1.8 -0.68 - -1.79 1.24 1.45 0.3 0.03 0.6 3.19 0.96 - - - 0.07 -1.3 0.96
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - -1.72 - -0.66 -1.59 - - - - - - - - -1.82 - 3.29 3.83 -2.18 - - - -1.9 - -
-0.05 - -2.16 -0.54 -0.69 -0.64 -1.05 -1.04 -0.14 0.75 -0.61 1.26 - 1.41 0.85 1.77 -0.13 0.2 1.09 -1.39 0.44 - -1.24 -0.87 -0.25 -0.67
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 1.9 - - - - - 1.68 - - 3.14 - - - - 3.36 - - - - - - -
- - - - - - - - - - - 3.91 - - - - - - 3.46 - - - - - - -
- - - - - - - - - - - - - - - 2.8 1.52 3.05 2.55 1.0 - - - - - -
- - - - - - - - - - - - - - - - 3.12 - 4.12 - - - - - - -
1.45 - - - - - - - - - - 2.54 - - 0.18 2.33 - -0.16 2.08 1.43 1.79 - - - - -
- -0.33 - 0.83 2.78 0.56 - - - - - - 2.18 - - - - - 3.39 - - - - - - -
-0.41 -0.97 1.87 0.99 0.15 0.59 - - -0.5 - - - - 1.19 -0.64 1.02 - 0.89 2.88 0.1 - -0.94 - - - -
- - - - - - - - - - - - - - 2.27 - - - 4.0 - 2.37 - - - - -
- - - - - - - - - - - - - - - - - - 3.44 - - - - - 1.12 3.7
- - - - - - - - - - - - - - - - - - - - - - - - - -
-0.58 -0.32 -0.53 -0.04 -0.16 -0.73 -0.37 -0.35 -0.1 0.27 0.23 -0.47 -0.74 -0.09 -0.11 0.0 -0.34 0.59 1.26 -0.47 -0.18 -0.92 0.54 0.41 0.66 0.17
- - 1.48 - - - - - - - - - - - 3.35 - - - 3.7 - - - - - - -
- - - - - - - - 2.21 2.0 - 3.18 - - - - - - 3.05 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
1.67 0.23 - - - - 0.54 -0.88 - - 0.02 1.19 1.68 1.65 -1.16 0.24 0.88 - 2.06 0.3 -0.31 - - - -1.58 -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.