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Heatmap: Cluster_36 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

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Gene
Light - ZT1
Light - ZT3
Light - ZT5
Light - ZT7
Light - ZT9
Light - ZT11
Light - ZT13
Light - ZT15
Dark - ZT17
Dark - ZT19
Dark - ZT21
Dark - ZT23
Light - ZT25
Nutrient stress - Low nitrogen - 10%
Nutrient stress - Low phosphate - 0%
Nutrient stress - Low sulfate - 2%
Nutrient stress - Low micronutrients - 0%
Nutrient stress - NaCl - 75 mM
Nutrient stress - Mannitol - 100 mM
Nutrient stress - Control
Environmental stress - Prolonged darkness - 72h
Environmental stress - Cold - 4C
Environmental stress - Heat - 37C
Environmental stress - Control
Environmental stress - High light - 150 uE
Environmental stress - Control high light - 40 uE
- - - - - - - - - - - - - - - - - - 3.87 3.5 - - - - - -
- - - 0.27 0.9 - - - - - - 0.29 - - 2.75 0.18 0.39 - 3.19 0.87 - - - - - 0.69
- - - - - - - - - - - - - - - - - - 4.48 - - 1.91 - - - -
- - - - - - - - - - - - - - 2.25 - - - 4.41 - - - - - - -
- - - - - - 2.19 1.95 - - - - - - - - - 0.45 3.77 0.61 0.05 - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - 1.97 1.87 - - - - - 1.88 - - 3.56 - 1.54 - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - 3.71 - - - - - - - - - 3.69 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
2.12 -1.7 -1.28 1.59 - - 0.17 -1.39 -1.23 1.26 1.27 - 0.7 -1.86 - - - -0.33 2.39 -0.48 -0.72 - - -1.38 - 0.61
2.76 - - - - - - - - 1.43 - - - - - - - - 3.05 1.1 2.12 - - - 0.8 -
- - - 2.61 - - - - - - - - - - - - - - 3.97 - - - - - - 2.08
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- 1.99 - - - - - - - - - - - - - 1.89 - - 4.2 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - - - - - - - 2.91 - - 1.93 3.48 - - - - - 1.82 -
-1.27 0.07 -0.28 -0.39 -1.5 -1.39 0.41 - 0.86 2.03 -0.46 2.06 -1.01 -1.99 - - - - 2.72 - 0.64 - -0.78 -0.8 - -
- - - - - - - - - - - - - - 4.03 - - - 3.27 - - - - - - -
- - - - - - - - - - - - - - 2.06 2.96 - -0.12 3.45 - 0.18 - - - - 0.05
- - - - - - - - - - - - - - - - - - 4.09 - 3.16 - - - - -
- - - 1.69 - - -0.76 - -0.84 - - -0.86 - - - - - 1.19 4.23 - - - - - - -
- - - - - - - - - - - - - - - - - - 3.21 - 3.28 2.82 - - - -
- - - - - - - - - - - - - - - 2.46 - 2.03 4.04 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - 3.81 - - - - - - - - - - - - - - - 3.58 - - - - - - -
- -0.56 -0.14 - - -0.13 - 0.75 0.98 - - - - 1.6 0.69 -0.16 -0.17 1.62 2.43 0.54 - - -0.52 -0.24 - 0.97
- - 1.02 2.37 - - - 1.81 0.83 - 0.75 - - 1.2 0.69 - - - 2.37 - - 1.47 - - - -
1.35 0.9 - 1.73 - - 1.1 - - 1.6 - - 1.09 - 0.56 - 0.88 - 1.64 - -0.29 1.89 - - - -
- - - - - 2.99 - - - - - - - - - - - - 3.74 - - - - - - 2.24
- - - - - - - - - - - - - - - - - - 3.38 - - - - - - 3.96
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - 1.9 - - - - - 1.52 - - 2.21 3.88 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- - - - - - - - - - - - - - - - - - 4.7 - - - - - - -
- 3.21 - - - - - - - - - - - - - - - - 4.07 - - - - - - -
-0.24 - - - - - - - - - - -0.29 - - - - - - 4.57 - - - -0.75 - - -
- -0.91 - - - 0.74 - - - -1.21 -1.2 - -1.27 -1.33 -1.25 1.38 -0.93 0.09 2.51 - 1.59 0.84 0.18 -0.56 -1.78 2.3
- - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - 3.28 0.75 - - - - - 3.87

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.