Heatmap: Cluster_386 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc11g065090.2.1 (Solyc11g065090.2)
-0.5 -1.6 0.58 0.82 -1.11 -0.11 -2.01 0.02 -0.31 0.29 -0.04 -0.6 -0.33 -0.72 0.56 0.72 0.32 -0.75 -1.35 -0.5 -0.65 0.2 0.21 0.27 0.2 0.74 0.4 0.54 0.5 0.2 0.19 0.07 -0.9 -0.17
Solyc11g065095.1.1 (Solyc11g065095.1)
-1.2 -1.7 0.85 0.89 -0.49 -0.4 -2.61 -0.18 -0.09 -0.25 0.33 -0.57 0.03 -0.51 0.43 0.67 0.21 -0.89 -1.53 -0.53 -0.29 0.23 -0.0 0.17 0.26 0.27 0.2 0.56 0.54 0.47 0.35 0.26 -1.28 0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.