Heatmap: Cluster_84 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Sterile Leaflet
Fertile Leaflet with Sori
Primary Rachis
Secondary Rachis
Petiole
Crozier
Root
-3.85 -0.97 -1.62 -1.48 -2.1 -3.5 2.44
Cba_g35293 (UBC2)
- -1.35 -0.98 -1.18 -3.69 -3.37 2.46
Cba_g35476 (ACT11)
- -1.26 -1.15 -1.55 -2.24 -3.65 2.46
Cba_g35607 (RPL34)
- -0.95 -1.53 -1.94 -3.31 -4.53 2.52
Cba_g35975 (PCR2)
-4.48 -0.86 -1.65 -1.61 - -4.48 2.51
Cba_g36854 (CSD1)
-3.87 -1.55 -1.42 -2.7 -2.42 - 2.55
-4.12 -1.48 -0.76 -1.28 -2.23 -5.2 2.42
Cba_g39724 (VMA10)
- -0.68 -1.15 -4.22 -1.9 - 2.49
- -1.23 -4.87 -2.57 - -4.82 2.66
Cba_g40169 (ISU1)
-2.15 -0.92 -1.43 -2.65 -1.34 - 2.41
- -0.65 -1.07 -2.84 -2.0 - 2.46
-4.12 -0.36 - -3.5 - - 2.6
Cba_g44035 (ACT11)
-4.32 -0.32 - -2.72 - - 2.58
Cba_g44407 (UBQ3)
-3.12 -0.49 -1.51 -2.1 -1.89 -4.61 2.4
- -2.46 -2.54 -1.82 - - 2.67
-4.59 -1.56 -1.08 -1.23 -1.14 -5.79 2.39
Cba_g44918 (GCN3)
-1.92 0.07 -1.63 -2.01 -4.39 -4.8 2.33
Cba_g45945 (UGP2)
-1.32 -0.11 -4.62 -1.75 -5.43 - 2.41
Cba_g45957 (BIP)
- -0.74 - - - - 2.68
Cba_g46017 (ACT11)
-2.69 -0.09 -2.55 -1.02 - - 2.39
-3.53 -0.37 -3.81 -2.2 -5.39 - 2.54
Cba_g46360 (ACT11)
- -1.45 -1.86 -1.52 - - 2.59
Cba_g46795 (scpl44)
- -0.07 -3.91 -2.96 -3.53 - 2.53
- -1.54 -1.67 -1.71 -2.84 - 2.56
- -0.92 - -2.16 -2.42 -2.64 2.56
Cba_g49001 (XCP1)
- -1.0 - - - - 2.7
Cba_g49058 (PGR5)
- -0.84 -0.93 -2.98 - - 2.53
-3.1 -1.43 -2.28 -2.33 -1.1 - 2.5
Cba_g49223 (UBQ11)
-3.88 -0.65 - -1.66 - - 2.58
- -1.21 -1.19 -1.17 -1.42 -3.55 2.39
-3.66 -1.56 -1.74 -2.5 -1.88 -5.18 2.54
-5.05 -0.26 -1.76 -1.96 - - 2.48
Cba_g50292 (VDAC1)
- -0.94 -1.49 -1.51 -2.51 - 2.48
Cba_g50880 (FKBP12)
-4.54 -0.53 -2.97 -3.49 - - 2.6
Cba_g50931 (ATG8F)
-2.62 -0.5 -1.73 -2.84 -3.41 - 2.48
-5.18 -1.35 -0.8 -2.33 -1.09 - 2.42
Cba_g51006 (SAMDC)
- -0.59 -1.63 -3.7 - - 2.57
- -0.73 -0.94 -0.85 -2.37 - 2.36
- -0.59 -3.5 -2.67 -2.07 - 2.55
Cba_g51591 (UBQ11)
-3.34 -1.18 - -1.57 - - 2.61
Cba_g51851 (RPL27A)
-2.23 -1.07 -1.79 -3.06 -4.54 -3.28 2.53
Cba_g52216 (BBC1)
-5.49 -1.32 -1.69 -1.45 -2.78 - 2.52
- -1.35 -1.79 -2.13 -6.01 -5.8 2.6
Cba_g52654 (NFD3)
-5.93 -1.41 -1.22 -2.29 -2.52 -4.94 2.53
- -0.32 -3.38 -1.65 - -2.43 2.48
- -1.72 -3.0 -1.04 -2.61 -2.84 2.53
Cba_g54024 (LSR1)
- -1.07 -0.95 -1.61 -2.27 -4.4 2.44
Cba_g54142 (UBQ11)
-3.81 0.07 -2.77 -1.77 - - 2.44
- -0.89 -1.0 -2.06 -3.09 -4.37 2.47
- -1.03 - - - - 2.7
Cba_g54417 (WRKY51)
- -0.25 -0.95 -1.7 -2.86 -3.88 2.36
Cba_g55041 (FER3)
-3.27 -0.55 -5.09 -5.52 - -3.95 2.61
Cba_g55056 (VPS32)
-2.57 -0.62 -2.48 -1.63 - -4.11 2.49
Cba_g55195 (ACT11)
- 0.4 -2.95 -2.18 - - 2.42
- -0.66 -2.09 -2.05 -1.57 - 2.47
Cba_g56058 (MTO3)
- -0.29 - -2.12 - - 2.57
- -0.62 - - - - 2.67
Cba_g57188 (cICDH)
-6.34 -0.77 -1.05 -1.43 -1.36 -6.17 2.36
- -0.65 - -1.78 - - 2.6
-4.04 -0.16 - -0.59 - - 2.43
Cba_g58467 (GAMMAVPE)
-3.11 -0.64 - -1.67 - - 2.57
- -0.38 -2.03 -2.06 -1.88 -3.32 2.43
-1.64 0.11 -1.65 -1.47 -2.06 -2.51 2.17
- -0.95 -1.41 -2.96 -3.07 -4.77 2.54
Cba_g59429 (ACT7)
- -0.38 -3.5 -2.7 - - 2.58
- -0.48 - -1.98 - - 2.59
Cba_g59550 (TUB8)
-3.28 -0.34 - -1.56 - - 2.53
Cba_g60228 (HSC70)
-0.82 -0.03 -3.12 -2.51 -5.13 - 2.36
Cba_g60544 (TCTP)
- -1.02 - -3.7 - - 2.68
- -2.88 - -1.22 - - 2.69
- -0.84 -1.47 -2.86 -2.86 -4.01 2.52
- -0.02 - - - - 2.59
Cba_g61329 (ARFA1E)
-2.82 -0.16 - -2.65 - - 2.54
Cba_g62201 (CKX3)
-5.27 -1.3 -1.23 -1.58 -1.71 -6.38 2.46
Cba_g62943 (HIR1)
- -0.53 -1.4 -4.18 -1.57 - 2.47
- -2.18 -2.45 -0.82 -2.07 - 2.53
Cba_g63174 (UBQ11)
-2.51 -0.1 -4.86 -2.22 - - 2.5
Cba_g63232 (INV-E)
- -0.74 - - - - 2.68
-1.45 -0.29 -2.7 -1.5 -3.82 -4.95 2.38
-4.07 -1.46 -1.08 -1.62 -1.97 -5.31 2.46
- -0.17 - - - - 2.61
- -0.7 - -0.96 - - 2.55
Cba_g65013 (GSTZ2)
-4.77 -0.67 -0.73 -0.94 -0.76 -3.72 2.18
- -1.2 -2.79 -1.91 - - 2.62
-2.78 -1.72 -1.78 -1.2 -1.69 - 2.46
-2.72 -0.04 - -2.77 - - 2.52
Cba_g68698 (ATJ)
-4.83 -0.85 -1.45 -2.57 -1.62 -4.75 2.46
Cba_g69650 (RABE1b)
- 0.41 - - -2.18 - 2.45
Cba_g70536 (PDR12)
-6.04 -0.65 -1.96 -2.19 -1.21 -2.92 2.41
-3.21 -0.51 -1.37 -3.26 -3.43 -2.21 2.43
-4.45 -0.63 -0.88 -1.63 -3.88 -3.29 2.4
-3.6 -1.15 -2.1 -2.34 -1.75 -4.62 2.51
Cba_g73504 (RS27A)
- -0.56 -2.95 -2.05 - - 2.57
- -0.21 -1.61 -3.05 -2.95 - 2.47
- -0.46 -0.83 -2.35 - - 2.46
-4.01 -1.45 -1.76 -2.06 -3.45 -5.46 2.57
-1.7 0.16 -3.95 -3.34 - - 2.44
Cba_g77033 (TCTP)
-4.57 -1.44 -1.58 -1.69 -3.85 -5.63 2.55

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.