Heatmap: Cluster_76 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg cell
Ovule
Uninucleate microspore (Col-0)
Uninucleate microspore (Ler-0)
Pollen (bicellular, Col-0)
Pollen (late bicellular, Col-0)
Pollen (bicellular, Ler-0)
Pollen (tricellular, Col-0)
Pollen (tricellular, Ler-0)
Pollen (mature, Col-0)
Pollen (mature, Ler-0)
Sperm
Pollen tube (Col-0)
Flower (receptacles)
Flower (floral buds)
Flower (sepals)
Flower (petals)
Flower (stamen filaments)
Flower (anthers)
Flower (carpels)
Flower (stigmatic tissue)
Pedicel
Axis of the inflorescence
Silique
Silique (senescent)
Pods of siliques
Pods of siliques (senescent)
Embryo
Endosperm
Seed
Seed (young)
Seed (germinating)
Seedling
Seedling (etiolated)
Meristem
Stem (internode)
Stem (internode, senescent)
Stems
Leaf (rosette)
Epidermis cells
Mature guard cells
Root (differentiation zone)
Root (elongation zone)
Root (meristematic zone)
Root (apex)
Root (stele)
Root (QC cells)
Root (tip)
-0.33 0.45 0.48 -0.36 -0.97 -4.26 -1.07 -4.06 -1.77 -2.17 -1.73 - -1.59 0.44 -0.46 0.21 -0.17 -0.53 -0.91 0.35 -1.14 -0.05 0.1 -0.41 -1.16 0.03 0.71 -0.3 -0.95 -1.98 -0.07 0.16 0.12 0.58 -0.15 -0.43 1.0 0.1 2.14 -3.64 -1.51 1.4 0.43 0.01 0.28 2.39 -0.74 -0.82
AT1G04110 (SDD1)
3.08 0.97 -0.21 -0.28 -0.58 -6.28 -0.29 -6.35 - - -5.85 -7.61 - 1.85 0.49 2.14 -5.34 -6.26 -0.05 0.77 -0.44 2.82 1.42 -2.24 - -3.43 - 0.29 -1.67 -6.58 -1.05 1.55 1.39 0.34 -0.74 -2.15 -3.83 -0.83 -2.23 -0.36 -3.53 -5.81 - -6.13 -5.72 - -4.16 -7.81
0.39 0.3 0.27 0.16 -0.22 -0.39 -1.08 -1.05 -3.41 -1.31 -2.39 1.11 -2.67 -0.48 0.59 -0.67 -0.82 -3.08 -0.41 1.03 -0.28 -0.68 0.32 -1.02 0.51 -0.9 0.68 1.17 -0.98 2.24 -1.16 -0.12 -0.5 -1.29 -1.28 -0.25 0.38 -0.27 1.62 -2.57 - 2.02 0.33 -0.28 0.48 - -4.32 -1.71
-0.29 0.34 0.74 1.16 0.46 -0.09 0.96 -1.57 -1.73 -3.97 -3.1 -4.92 -2.35 0.23 0.37 -0.35 0.23 -0.01 -0.85 0.32 0.21 -0.17 0.16 -0.21 -1.02 -0.21 -0.43 0.43 1.27 -1.54 0.25 0.14 -0.29 0.24 0.03 0.39 0.33 -0.05 -0.59 -1.93 -1.7 0.58 0.66 0.11 0.61 1.23 -1.76 -0.23
AT1G15990 (CNGC7)
-3.54 -6.35 -3.34 -2.87 -1.12 2.08 -0.77 4.12 2.89 0.63 0.94 -3.04 2.95 -4.96 0.99 -6.02 -7.39 - 1.27 -6.46 -5.96 -5.62 -6.21 -5.59 - -4.52 -7.32 -7.07 -3.39 - -5.96 -6.54 -2.98 -7.22 -11.08 -5.6 - -5.96 -6.01 0.42 -7.01 - -7.1 - - - - -
AT1G32480 (IDH-IV)
- -2.75 - - 1.03 4.21 - - - -0.95 - -0.28 - - - - - - 0.65 -2.34 - - - - - - - - 0.95 2.2 - - - -0.62 - - 1.46 - - 3.83 - - - - - - - -
AT1G36370 (SHM7)
0.33 0.26 -0.87 -0.82 -0.84 -1.24 -0.97 -1.29 -1.81 -2.6 -2.73 -6.04 -2.43 0.02 0.1 -0.73 -0.38 -0.99 -1.01 -0.18 -0.7 -1.71 -1.24 0.01 -1.38 -0.29 1.18 -0.29 1.48 -1.6 0.28 -1.19 -0.14 -0.46 -1.13 -0.19 2.01 0.06 -0.46 0.2 3.17 0.29 -0.77 -1.31 -0.43 -0.98 1.17 -1.45
-4.26 -0.9 -2.93 -2.6 -4.2 -4.01 -2.71 -2.09 -0.9 -2.75 -1.13 - -7.77 0.41 1.53 2.07 -2.44 -1.64 -2.72 -0.28 0.29 1.82 0.69 0.82 -2.58 1.87 1.63 -2.64 -3.14 -6.39 -3.58 0.4 1.73 -0.46 -2.62 0.02 1.97 0.67 2.18 1.59 -0.91 - - - -7.42 - - -9.64
-0.39 -1.04 -3.04 -2.73 -2.43 -2.77 -2.37 -7.54 -7.12 -10.18 -7.21 -8.98 -7.81 -2.2 -1.34 -0.0 -3.61 -2.69 -2.24 -0.36 -3.57 -1.83 -0.61 -0.99 -5.61 -0.9 -3.13 -0.73 -0.21 -6.31 -0.94 -2.25 0.19 -0.74 -0.08 -0.75 0.37 -0.37 3.82 4.22 -4.9 -3.91 -2.8 -3.68 -2.92 - - -3.55
AT1G68910 (WIT2)
-0.9 0.72 -2.35 -2.91 -2.85 -2.61 -2.45 -2.48 -4.06 -5.49 -5.87 - -0.91 0.88 1.27 0.27 0.1 -0.5 -1.39 0.65 -0.17 -0.4 0.04 0.68 -1.92 0.49 1.77 0.13 1.26 -3.18 0.77 0.32 0.57 0.49 0.34 0.36 1.14 0.37 1.32 -0.49 -0.76 0.98 0.74 -0.93 0.54 - -12.74 -0.38
-1.7 1.15 -3.84 -3.35 -3.48 -7.08 -3.76 - - -8.58 - - -8.64 0.16 -0.54 -0.22 -0.21 -0.97 -1.37 1.16 -0.12 -0.72 -0.14 0.14 -0.71 -0.07 1.5 0.27 1.34 -0.7 0.73 0.77 -0.6 -0.09 0.51 -0.49 0.93 0.15 0.41 -2.03 -1.7 0.78 1.0 0.67 0.38 2.51 -0.51 0.21
AT1G74720 (QKY)
-2.38 1.46 -2.03 -4.41 -2.83 -6.04 -4.61 -8.69 -8.64 -6.72 -10.88 -9.27 -2.98 0.67 -0.18 0.32 0.17 0.16 -1.07 1.39 -0.22 0.73 1.36 0.26 -0.52 0.11 0.28 1.73 0.44 -1.07 0.96 1.3 0.51 0.14 1.77 0.55 -0.47 0.09 -0.12 -2.91 -3.66 -0.57 -0.4 1.05 0.33 -2.21 -3.82 0.17
1.92 0.98 0.87 1.0 0.71 0.75 1.09 -1.18 -2.06 -4.76 -4.18 -7.74 -3.54 0.5 -0.52 -0.74 0.03 0.12 -0.74 0.5 2.19 -0.74 -0.19 -0.09 -2.95 -0.7 -0.81 -0.89 1.07 -3.21 1.37 -0.98 -1.95 -1.2 0.12 -0.67 -0.73 -0.63 -1.37 -3.66 -4.06 -1.59 0.25 0.13 0.04 1.06 -1.62 -0.14
0.46 -2.24 1.08 0.79 1.17 0.91 0.41 3.0 2.19 2.6 1.35 -2.31 1.41 -2.9 0.74 -3.55 -2.75 -2.55 1.79 -2.43 -4.78 -3.75 -6.35 -2.43 -4.17 -3.34 -2.15 -0.91 -0.53 -5.41 -2.62 -2.65 -3.28 -4.77 -5.29 -4.84 -1.04 -3.69 -4.88 -0.31 -0.22 -2.42 -2.19 0.06 -2.24 -4.99 -3.38 -0.45
AT1G80080 (TMM)
-4.14 1.85 -1.6 -3.3 -2.05 -5.81 -3.43 -5.44 -6.82 -5.51 -6.14 -1.06 -6.6 0.18 1.18 0.8 -4.28 -3.15 -0.92 2.38 -1.91 1.93 2.47 -2.29 -3.43 -2.39 -2.5 0.51 -2.44 -5.3 -1.52 2.28 2.08 1.4 0.21 -3.4 -5.97 0.78 -1.57 0.9 0.82 -4.49 - -0.61 -2.88 - -11.68 -2.62
0.96 1.1 0.88 0.52 0.77 0.27 0.42 -2.43 -4.87 -4.73 -5.51 - -6.92 -0.28 0.47 0.22 -0.08 -0.31 -1.64 0.8 0.38 0.28 0.83 0.44 -3.11 0.24 -2.29 0.47 1.77 -3.08 0.9 0.56 -0.3 -0.66 0.16 0.38 -0.2 0.18 -1.22 -1.78 -3.45 -0.82 0.3 0.83 0.12 -2.04 -0.22 0.08
-0.52 0.17 -0.1 -0.87 -0.62 -0.38 -0.55 0.2 0.47 0.52 0.67 -2.14 -2.4 -0.15 -1.22 -0.53 -0.12 -0.33 0.36 -0.18 -1.05 -0.71 -0.31 -1.14 -0.8 -0.83 0.64 -0.62 -1.08 -1.29 -0.41 -0.32 -0.91 0.41 -0.69 -0.42 0.71 -0.69 -0.25 -0.13 0.62 0.98 1.53 0.45 0.5 2.2 -1.34 0.25
- - - 2.0 -0.04 0.95 0.06 - - - - - - - - - - - - -1.9 - - 0.5 - 0.16 - 0.3 - 2.56 - - -1.77 - - - 1.44 1.4 -3.12 - 0.46 - - - - - 4.44 0.4 -
AT2G26140 (ftsh4)
0.24 0.12 0.21 0.51 0.12 -0.5 0.41 -1.77 -1.96 -3.05 -2.54 -2.88 -3.58 -0.05 -0.2 -0.42 -0.22 -0.11 -0.48 0.13 0.21 -0.21 0.3 -0.62 -0.49 -0.66 0.26 0.73 0.12 -1.12 0.24 0.12 -0.56 -0.53 0.29 -0.65 -0.07 -0.4 -0.52 -1.02 3.14 -0.09 -0.12 0.22 0.17 -1.2 -1.29 -0.13
-1.76 1.5 -5.89 -5.79 -5.05 -5.11 -5.17 -9.39 -9.49 - - -10.7 -8.51 0.66 0.59 0.24 0.23 0.44 -1.07 1.46 -0.33 0.93 1.26 -1.08 0.44 -1.33 -2.25 1.43 -0.84 0.65 0.66 0.23 -0.49 -0.04 1.79 -1.62 0.6 0.52 -2.17 -0.72 -2.84 -1.42 0.36 1.06 0.2 0.14 1.65 0.11
3.66 -7.65 - -4.28 -5.3 - - -4.94 - -3.92 -6.68 -7.43 -6.31 -6.97 -4.26 -4.3 - - -4.22 -3.44 -3.24 -2.64 - -4.62 -2.52 -6.55 -4.71 - -2.79 - -4.51 -1.05 - - -3.04 -3.43 - -4.92 -3.42 -0.91 5.04 - - - -11.22 - -18.33 -
1.0 1.26 -1.31 -1.4 -1.68 -1.93 -1.23 -3.52 -4.48 -8.23 -7.41 -10.84 - 0.85 0.18 0.14 0.19 -0.41 -1.16 1.07 0.06 0.36 0.79 -0.05 -1.35 -0.0 0.13 1.18 0.64 -1.85 0.83 0.38 -0.28 0.01 0.81 -0.13 0.58 0.21 0.36 -0.65 -1.49 -0.39 0.15 1.01 0.36 0.83 0.03 0.18
AT2G47900 (TLP3)
0.23 1.45 -0.11 -0.7 -0.11 -0.94 -0.99 -2.64 -3.54 -4.84 -5.32 -6.61 -3.61 0.19 -0.32 -0.21 -0.15 -0.0 -1.15 0.92 0.13 -0.07 0.25 -0.66 -2.11 -0.56 -0.61 0.93 1.01 -1.99 -0.32 -0.18 -0.3 0.17 0.49 -0.44 -0.37 0.07 -0.36 -0.57 -1.37 0.24 0.56 1.12 -0.08 1.45 2.15 0.23
1.13 -0.13 0.79 0.75 0.77 1.19 0.77 -0.7 -1.69 -4.67 -4.54 -8.02 -3.75 -0.2 -0.87 -0.53 0.43 -0.03 -1.79 -0.14 -0.21 -1.02 -0.8 -0.43 -1.72 -0.46 -0.5 -1.35 2.1 -2.06 -0.74 -0.36 -1.06 0.46 -1.01 -0.39 0.58 -0.24 0.73 0.04 -1.45 0.5 1.41 -0.38 0.3 0.49 0.51 -0.05
AT3G04240 (SEC)
0.78 0.63 -0.36 -0.68 -0.92 -1.59 -0.54 -0.77 -0.32 -1.67 -0.2 -10.47 -2.37 0.4 -0.65 -0.16 0.2 -0.47 -0.47 0.43 -0.88 -0.37 -0.07 -0.35 -0.77 -0.12 1.14 0.12 -0.1 -1.21 -0.05 -0.62 -0.2 0.02 0.01 -0.23 1.08 0.3 1.26 2.02 0.99 0.54 -0.04 -0.1 -0.27 -0.99 -0.59 -1.03
0.87 -0.01 -0.26 -0.5 -0.52 -0.16 -0.43 0.23 -0.08 -1.36 -1.2 -4.75 -2.14 0.13 0.39 -0.46 0.1 0.26 -0.4 -0.12 -0.15 -0.5 -0.33 -0.38 -0.3 -0.26 0.38 0.24 0.94 -0.61 -0.0 -0.2 -0.41 0.29 -0.28 -0.17 0.12 -0.17 0.43 -0.75 1.06 0.38 0.73 -0.35 0.67 1.54 -1.23 -0.1
0.52 0.02 1.4 0.81 1.01 0.72 0.89 0.74 0.79 0.48 0.84 2.02 -0.5 -0.5 -0.85 -1.17 -0.68 -1.41 -0.5 -0.29 -0.99 -1.36 -0.95 -0.68 -1.85 -0.82 -0.64 -0.03 -0.37 -1.71 -0.76 -0.69 -1.16 -0.68 -1.11 -0.42 -0.19 -0.22 -0.21 -1.5 -0.13 -0.24 0.88 0.5 -0.42 -0.6 -2.51 0.54
-1.19 -2.3 -1.15 -2.7 -0.61 -1.55 - - - -4.21 - - - -4.16 0.38 -1.23 1.32 1.11 -2.69 -2.89 - -1.54 - -7.2 -0.69 -1.47 - -0.57 -3.09 -0.3 -2.84 -0.05 -1.37 0.85 -3.9 -1.1 0.44 -1.9 1.59 - - 4.31 0.98 -2.02 1.49 - 1.31 -2.21
0.94 1.28 1.83 1.74 1.16 0.72 1.74 -0.8 -1.66 -3.81 -3.19 -4.62 -0.98 -0.13 -0.6 -0.64 -1.31 -1.14 -0.84 1.23 -0.0 -0.41 0.22 -0.45 -0.97 -0.73 -1.24 0.33 0.68 -0.55 0.93 -0.47 -1.18 -1.21 0.54 -0.85 0.45 -0.09 -1.1 -1.71 0.41 -2.05 -1.25 0.5 -1.01 - -4.01 -0.54
-0.54 0.61 0.54 0.55 0.46 0.17 0.67 -1.86 -1.76 -2.71 -2.75 -5.37 -1.83 0.64 -0.53 0.37 0.68 0.18 -0.73 0.5 0.65 0.02 0.25 0.11 0.19 0.11 0.92 0.43 -0.76 0.31 0.13 0.54 -0.43 -0.01 0.2 -0.13 0.64 0.21 0.2 -2.59 -4.86 0.15 0.35 0.41 -0.01 -1.51 -0.52 -0.01
AT4G27920 (PYL10)
-0.91 -0.14 -0.35 -0.16 - 1.69 - 0.33 - - - - - 1.72 - -0.28 - - 0.01 -0.69 - - - 2.46 -0.42 1.66 -0.28 - 1.83 - 1.51 -0.06 -0.85 - 0.06 2.43 0.96 -0.81 -2.13 1.47 - - - - - - 2.19 -
-2.09 -0.94 2.88 -0.65 0.17 - 0.3 - - -2.32 - - - -0.04 - 0.44 0.19 - -2.36 -2.64 1.41 - -0.67 -0.16 - -0.5 - - -1.08 - - -0.81 -0.71 0.7 -1.36 - 0.09 0.91 2.82 3.21 - 0.26 -0.65 - 1.68 - - -
1.27 0.18 -1.69 -2.02 -1.42 -1.2 -1.55 -2.93 -3.13 -4.76 -3.82 -1.27 -3.09 0.24 0.89 -0.28 -0.27 -1.21 -1.24 -0.08 0.01 -0.66 -0.71 -0.25 -0.88 -0.02 1.1 -0.3 3.52 -1.03 -0.62 -0.61 -0.17 -0.33 -1.01 -0.79 0.24 -0.21 0.1 0.35 1.52 0.12 -0.48 -0.55 -0.97 -1.68 -0.33 -1.36
3.61 0.63 0.65 0.35 0.49 -0.64 0.34 -4.17 -4.91 -6.47 -6.41 - -7.52 0.35 0.21 -0.21 -0.81 -1.52 -1.07 0.89 -0.24 -0.56 -0.3 -0.39 -0.75 -0.24 0.78 -1.66 -0.31 -0.92 -0.95 1.11 -0.47 -0.3 -0.23 -0.47 -0.18 0.42 -0.23 -1.33 -2.11 -1.06 -1.83 -1.93 -1.68 1.25 - -1.85
0.35 -0.22 -0.83 -0.93 -0.84 -0.65 -0.81 0.39 1.06 0.51 1.07 2.79 0.44 -0.42 -0.17 -1.17 -0.63 -1.82 -0.12 -0.69 -1.1 -1.16 -1.02 -0.08 -0.69 -1.04 -0.2 -1.28 -0.82 -0.2 0.76 -0.85 -1.24 -0.37 -1.28 -0.94 0.25 -0.61 0.51 -0.03 -0.56 0.73 -0.24 -0.68 -0.35 -0.46 1.5 -1.6
AT5G08160 (PK3)
0.57 -0.35 0.91 1.19 1.05 1.35 1.41 0.45 -0.15 -2.41 -1.75 -11.98 -2.0 -0.21 -1.29 -1.24 -0.73 -0.11 -1.83 -0.39 -0.69 -1.17 -0.49 -0.5 -3.79 -0.67 -1.31 -0.43 -0.03 -4.84 -0.36 0.04 -1.07 -0.12 -0.5 -0.3 -1.24 -0.21 -1.39 -3.07 0.47 0.59 1.39 0.57 0.8 2.06 -0.71 0.73
AT5G09410 (CAMTA1)
1.46 0.77 0.25 0.5 0.26 0.15 0.32 -1.69 -2.58 -4.27 -3.67 -7.77 -4.19 0.72 -0.05 -0.24 -0.0 -0.31 -1.35 0.5 0.16 0.01 0.28 0.0 -1.82 0.23 0.23 0.49 0.23 -2.1 0.31 -0.14 -0.31 -0.13 -0.46 -0.15 0.68 -0.01 0.65 0.42 -0.03 -0.38 0.49 0.4 0.04 0.54 0.16 -0.28
0.42 -0.58 0.92 0.9 0.54 -0.92 0.76 -3.58 -3.07 -4.37 -3.28 -5.98 -2.18 -0.74 -0.47 -0.56 -0.25 -0.52 -0.86 -0.1 -0.47 -0.66 -0.04 -0.09 0.14 -0.45 -0.29 0.53 -1.05 -0.25 0.08 0.28 -1.5 -0.97 0.18 0.42 0.21 -0.62 0.07 2.58 0.21 -0.55 -0.84 0.26 -0.45 -0.76 1.95 0.03
AT5G19040 (IPT5)
-4.3 -5.57 - - - - - -5.05 - -4.96 - -6.06 2.92 -0.11 -1.86 -3.57 -3.66 -2.92 -3.01 -4.77 - -0.62 -4.22 -1.38 -3.53 -0.83 0.03 -1.19 -5.76 -7.28 -3.44 0.73 -0.03 1.46 -2.62 -2.35 2.14 0.51 -3.65 -2.88 -3.5 3.35 1.56 -3.26 3.34 - - -3.69
0.36 -0.51 0.58 0.7 0.27 -0.3 0.6 0.09 0.3 0.17 0.05 -3.1 -2.49 -0.19 -0.4 -0.55 -0.87 -0.94 0.73 -0.45 -0.22 -1.12 -0.99 -0.68 -0.61 -0.8 0.28 -0.34 1.71 -0.83 -0.38 -0.45 -0.78 -0.35 -0.67 -0.78 0.17 -0.62 0.49 0.63 1.41 -0.01 -0.66 -0.69 -0.68 -0.34 1.91 -1.18
0.32 0.38 2.0 1.99 1.11 -1.97 1.43 -7.65 -6.95 -5.73 -5.72 - -9.41 -0.23 -0.32 -0.75 -1.86 -1.89 -1.08 0.59 -1.05 -0.24 0.36 -0.64 -0.47 -1.09 -1.41 0.32 0.95 -0.56 0.37 0.56 -0.6 -0.51 0.51 -0.69 0.34 0.15 0.33 -2.26 -0.5 -1.3 -1.14 1.7 0.65 -4.33 -0.34 0.71
AT5G59420 (ORP3C)
0.41 -0.27 -0.08 -0.27 -0.39 -1.08 -0.35 -2.23 -2.85 -5.36 -4.96 -2.73 -2.04 0.3 -0.64 -0.64 -0.45 -0.59 -0.39 -0.3 -0.43 -1.37 -0.89 -0.57 -0.8 -0.59 1.59 -0.33 1.09 -1.35 -0.38 -0.29 -0.66 0.11 -0.66 -0.31 1.09 -0.1 1.45 0.09 2.29 0.33 -0.13 -1.09 -0.69 1.84 1.07 -1.3
AT5G62090 (SLK2)
0.56 1.17 -2.73 -2.45 -2.85 -5.28 -2.71 -9.14 -9.69 -8.19 -8.27 -8.8 -3.18 0.3 -1.2 -0.16 -0.06 -0.55 -1.0 1.14 0.02 -0.29 0.02 -0.28 -0.94 -0.2 0.34 1.05 0.72 -1.27 0.78 -0.86 -0.4 -0.54 0.41 -0.24 0.9 0.1 1.01 2.9 1.78 -0.4 -0.58 -0.27 -0.68 -1.53 -0.45 -1.28
AT5G62640 (ELF5)
1.73 0.02 0.51 0.17 0.42 -0.72 0.32 -2.24 -2.03 -2.57 -2.37 -2.13 -3.92 -0.34 -0.43 -0.67 -0.56 -0.6 -0.77 0.06 -0.63 -0.22 0.1 -0.72 -0.21 -0.96 -0.13 0.8 0.55 -0.13 -0.1 0.08 -0.49 -0.35 -0.11 -0.62 -0.28 -0.4 -0.0 0.14 1.9 -0.5 -0.15 -0.02 -0.38 1.83 0.78 -0.04
1.54 -0.95 -0.46 -0.72 -0.59 -3.1 -1.54 -8.08 -6.59 -7.01 -7.66 -6.25 - -1.27 -1.35 -0.47 -2.07 -1.35 -1.96 -0.74 -0.71 -0.14 -0.05 -1.57 -2.03 -1.13 -2.86 0.09 0.03 -2.0 -1.18 -0.1 -1.76 -1.85 -0.31 -1.6 -1.39 -0.93 -1.88 3.25 -1.99 -2.57 -3.21 -0.27 -1.5 2.36 3.58 -1.04

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.