Heatmap: Cluster_515 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc05g018870.2.1 (Solyc05g018870.2)
2.0 3.97 - - -2.84 -3.64 -3.15 - -4.94 0.01 -2.42 - -0.4 -3.48 -0.73 -3.16 -1.71 -2.84 - -1.43 -0.73 -0.92 -3.93 -1.57 -1.57 -4.93 -0.04 0.7 1.3 0.19 -0.45 -0.3 - -0.5
Solyc05g018875.1.1 (Solyc05g018875.1)
1.77 3.97 - - - -3.12 -2.38 - -3.46 -0.56 -2.41 - -0.82 -0.78 -1.37 - -1.11 - - -0.54 -0.79 -3.35 -1.57 -1.14 -2.28 -0.36 0.17 0.89 1.3 -1.34 0.06 -0.23 - -0.45

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.