Heatmap: Cluster_401 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc06g053770.3.1 (Solyc06g053770.3)
0.18 0.84 -0.57 -1.41 1.62 0.18 1.42 -0.38 0.11 0.58 -0.39 0.27 0.25 0.82 -0.24 -0.39 -0.28 -5.78 -10.44 -1.23 0.01 -0.25 -0.34 -0.5 -0.7 -0.71 0.18 0.04 -0.01 0.02 0.11 -0.28 -3.91 0.36
Solyc09g057660.3.1 (Solyc09g057660.3)
0.37 0.8 -1.23 0.37 1.06 0.34 1.14 -0.53 0.03 -0.15 -0.52 -0.37 -0.02 0.18 -0.83 -1.5 -1.55 -7.09 -7.87 -0.98 0.47 0.18 0.08 0.03 0.08 0.92 0.11 -0.03 -0.04 0.16 0.18 0.32 -3.84 0.64

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.