Heatmap: Cluster_82 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
-1.81 -3.33 -2.43 2.63 -1.52 2.95 2.86 4.59 -1.62 - -3.51 - - - - 0.29 - - - - - - - - -3.22 - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - -0.89 3.9 - -1.09 1.44 2.04 0.87 -0.94 -4.78 - - - - -0.08 1.71 - - - 1.82 - - -1.0 0.19 - -0.26 0.71 -0.49 0.19 - 1.08 0.4 -1.04 0.58 0.49 - - - -0.61 - 0.25 -1.03 -
- - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 2.31 0.88 4.39 4.1 - - - - - - - - - - - - - - - - 1.1 - - - -0.16 - - - - - - - - - - - - - - - - - - -
- 1.88 1.02 1.46 1.52 - - 4.58 - - - - - - - - - 2.62 - - - - - - 1.82 1.62 - - - - - - - - - - - - - - - - - - - - - -
- - 0.06 1.03 1.08 1.56 2.5 4.27 2.28 - - - 0.19 - -5.21 -0.31 0.07 -1.52 - - - - - - -0.65 -0.62 - - -0.99 -1.81 -1.36 0.04 -2.81 - 0.46 - -0.25 - - - - -0.77 - - - - - -2.26
- - - - - 3.13 2.36 4.26 - 0.83 1.02 0.86 - - - - - - - - - - - - 0.32 - - 0.22 -0.59 -2.93 - -0.49 - -0.59 - - - 1.7 - - - - - -1.15 - -0.91 -0.76 -
- - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 2.05 3.91 2.38 4.56 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.76 -1.18 0.31 2.47 0.92 2.72 1.99 2.7 0.44 0.1 -3.45 -2.5 0.15 -1.35 -3.63 0.41 -1.87 -0.24 - -2.24 -2.66 -2.87 -2.55 -4.0 -0.41 -0.74 -0.01 -0.62 -0.89 -1.89 -0.61 -1.23 -0.99 -0.77 -0.51 -0.06 -0.18 -0.05 -2.91 -1.35 -0.39 -1.71 -2.33 -2.28 -1.69 0.11 -1.49 -0.9
1.37 - 0.71 1.96 - 2.15 3.88 3.54 1.62 - - - - - - 1.65 0.98 - - - - - - - - -0.06 - - - - - - - - - - - - - - - - - - - - - -
-1.78 - -1.49 1.36 -1.88 2.46 2.53 4.77 0.95 - - - - - -4.56 - - - - - - - -0.86 - - - - - - -3.55 -1.02 - -2.44 -0.48 - - -1.21 - -1.23 - - - - -1.18 - - -0.7 -3.75
- - - 1.94 - - 2.61 5.13 1.63 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.94 -3.26 -1.04 0.62 -0.87 2.33 2.13 3.38 -1.77 -0.07 -1.61 -0.44 -0.33 -1.85 -4.18 - -3.67 -2.85 - -3.42 - -1.58 -2.14 - -0.47 - 0.52 -0.24 -0.7 -0.8 0.79 0.17 -0.63 0.0 -1.33 0.45 0.46 0.5 -1.32 -0.97 -2.18 -0.84 -0.56 -0.9 -1.33 0.59 0.83 -0.17
- - - - - 0.8 1.67 4.57 - - -0.18 1.58 - - -1.73 3.54 - 1.24 - - - - - - - -0.09 - - - - - - - - - - - - - - - - - - - - - -1.87
- -0.34 2.58 0.53 -3.22 2.64 2.12 3.54 -1.7 -2.43 -3.14 -3.34 -3.25 -4.59 -2.33 -3.54 1.61 0.67 -0.22 -1.22 -0.03 0.08 -0.7 0.9 -2.69 0.26 -5.0 -2.47 -2.57 -1.84 -2.34 -3.24 -3.78 -4.01 -4.89 -2.45 -4.91 -1.05 -4.51 -1.57 -1.51 -1.9 -2.49 -2.21 -1.29 -1.65 -3.98 -0.82
- 0.51 -1.35 - -1.73 2.0 - 4.57 - 0.87 - 0.53 - - -2.22 - - 1.39 - - - - - 2.96 - 0.25 - - - -1.92 - -0.93 -1.64 - - - - 0.24 - - - - - - - -0.78 - -2.45
- - -0.83 1.99 1.56 2.29 3.0 4.44 -0.88 - - - - - -3.63 - 0.52 - - - - - - -0.99 - 1.72 - - - - - - - - - - - - - - - - - - - - - -
- - - -0.65 2.48 3.19 3.85 4.19 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - 2.93 1.81 5.0 - - - - - - - - - - - - - - - - - - - - - -1.22 - - - - 0.41 0.58 - - - - - - 0.59 - - - - -
- - - - - 2.93 1.81 5.0 - - - - - - - - - - - - - - - - - - - - - -1.22 - - - - 0.41 0.58 - - - - - - 0.59 - - - - -
- -0.49 -0.5 1.13 0.28 2.52 2.8 3.95 - -0.47 - - - - -1.71 - -1.57 -1.52 - 0.61 0.76 -0.55 - -1.55 0.6 - 0.14 -1.4 - -2.03 0.65 - - - - 0.25 0.27 - - - - - - -1.05 - - 0.21 -2.2
-1.07 0.29 0.75 1.07 1.13 1.94 1.79 2.85 -0.04 -1.14 0.48 0.75 -2.42 - -3.62 -2.72 -0.77 -0.14 -1.37 0.3 -0.73 -1.82 2.06 -2.06 -0.03 -0.24 -0.81 -1.24 0.69 -1.21 -0.42 -1.14 -1.79 -1.76 -1.47 -3.23 -1.62 -0.34 -2.44 -1.36 -2.93 -1.47 -1.12 -0.61 -1.21 -1.44 -0.2 -1.39
-3.62 -1.6 1.2 0.13 1.35 1.73 2.15 3.42 1.23 -2.98 - -4.96 -3.22 -4.52 -2.75 0.25 0.45 1.16 -0.95 1.52 0.94 0.38 2.56 -1.49 -0.67 -1.27 -4.08 -2.09 -5.22 -6.09 -4.13 - - -3.38 - -3.81 -3.17 -3.01 -4.13 -4.9 -3.74 -3.05 -3.57 - - -1.54 -3.6 -3.77
- - - - -2.21 2.65 2.96 4.01 - 0.85 - - 0.05 -0.64 -4.59 -0.5 - -0.48 - -0.96 - - - - -0.28 - 0.95 -0.99 - -4.14 -2.23 -0.25 -0.1 - - - -1.18 -0.12 - -1.32 - -1.06 1.62 - -0.66 -0.25 - -
- - 0.03 0.47 - 1.6 0.96 5.2 - - - - - - - - - - - - - - - - - - - - 0.57 - - - - - - 1.19 - - - - - - - - - - - -
- - 1.56 2.52 0.14 2.73 3.6 3.24 - - - -1.59 -1.96 - -4.18 0.57 -1.96 0.11 - - - - - 0.8 0.98 -2.42 0.4 - - -3.24 - - -4.3 - -2.61 -2.23 - -1.33 - - - - -2.44 -2.72 - - - -
0.37 -1.09 0.16 - 0.35 3.06 3.3 3.45 -0.99 -1.12 - -0.93 -0.25 -2.66 -3.12 0.01 -1.47 -0.33 - - - - 1.33 - 0.03 -0.03 -1.47 - -0.96 -1.73 -0.95 -2.04 -2.03 -2.59 -3.16 -1.3 -2.9 -1.75 -2.27 -0.13 - - -2.44 - - -1.95 -2.75 -1.13
- - -1.0 1.79 -0.38 2.3 3.06 3.25 -0.93 -0.39 - -1.89 -1.47 -2.41 -1.75 - - -2.69 - -0.3 -1.14 -0.59 - -0.57 0.63 -3.21 -2.43 0.8 -0.58 -3.53 -1.17 -1.1 -0.56 -2.35 -0.46 - -0.5 0.59 - -3.22 -7.05 0.36 0.45 -0.06 -2.03 -0.81 0.19 -0.71
-0.25 1.37 -0.95 -0.63 -2.79 - -0.14 4.34 1.71 - - - - - -4.82 1.37 0.13 - 3.74 - - -1.68 - -2.01 - -2.12 - - - -0.05 - - - - - - - - - - - - - - - - - -
-0.75 0.55 - 1.35 -0.9 2.31 1.97 4.08 2.24 - - - - - - - 0.9 - - 2.14 - - - - 0.76 1.91 -0.69 - - - - - - - - - - - - - - - - - - - - -
- - 0.77 - - - - 5.02 - - - - - - - - - - 3.78 - - - - - - - - - - -3.07 - - - - - - - - - - - - - - - - - -
- - 0.77 - - - - 5.02 - - - - - - - - - - 3.78 - - - - - - - - - - -3.07 - - - - - - - - - - - - - - - - - -
- - -0.5 1.68 -0.88 0.85 - 5.01 - - - - - - - 1.72 2.65 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - 3.59 1.92 4.43 - 0.47 - - - - - - - - - - - - - - -1.02 - -0.47 -0.1 0.65 -2.8 - - -1.57 - -0.86 - - 1.2 - -0.74 - -0.48 - - - -0.16 - -
1.67 -0.34 -0.14 2.57 -0.31 2.73 3.75 3.64 - - - - - - - 1.1 -1.15 - - - - - - - -2.0 -1.6 - - - -5.17 -1.77 - - - -1.79 - - - - - - - - - - - - -
- 2.74 -1.71 -3.03 - 1.38 -0.86 4.52 - -0.93 -2.57 -2.86 -2.23 -1.32 -1.17 - 1.62 0.18 - - - -0.16 -0.16 -2.58 -2.41 0.96 - -0.86 -2.12 -1.74 -1.9 -2.73 -2.87 -2.75 - -2.13 - -0.99 -1.76 - - - -1.48 -1.47 - -0.96 -2.22 -1.17
- - - - - - 3.53 4.48 - - - - - - - - - - - - - - - - 3.82 - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - 5.17 - - - - - - - - - - - - - - - - - - 3.59 - - - - - - - - - - - - - - - - - - - - -
-3.15 -0.09 -0.25 1.57 0.24 2.28 2.72 4.18 0.17 -3.1 0.8 1.09 -2.58 -2.98 -3.2 -1.18 0.33 -1.47 - -2.12 -2.82 - - - -3.06 0.97 -3.09 - -3.68 -3.58 -3.42 -2.29 -2.1 -3.49 -0.78 -1.55 -3.08 - - - - - -1.84 - - -3.29 - -4.19
- 2.26 1.03 1.9 0.0 -0.21 - 5.15 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 0.72 -1.98 1.23 1.68 2.82 3.33 - 0.07 - - -2.15 -3.81 -0.15 -3.23 -0.8 -0.49 2.06 1.47 1.45 0.3 - -2.76 1.56 -0.5 0.02 -2.09 -3.18 -1.71 -1.29 -3.97 -2.73 -1.92 -4.16 -2.15 -2.54 -1.9 - -4.04 - - -2.45 -1.95 -2.28 -0.85 -1.11 -4.75
- - - - - 4.05 0.91 4.76 - - - - - - -1.76 - - - - - - - - -4.36 - - - -0.54 - -2.74 - - - - -2.28 - - - -0.97 - -1.38 - - - - - - -3.36
- - 0.24 -2.09 -0.36 1.99 0.63 4.06 - -2.1 - -2.09 -1.03 - -1.07 0.95 0.7 1.07 3.16 0.21 - - - - - -0.34 -0.97 - -0.64 -1.89 -1.66 -2.11 -2.86 -1.59 -2.15 -0.95 - -1.94 - - -1.43 - - - - -0.37 - 0.03
- - - - - 3.43 2.89 4.71 - - - - - - - - - - - - - - - - 1.85 - - - - - - - - - - - - - - - - - - - - - - -
- - - - 0.83 2.78 3.02 4.96 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
1.32 -0.28 -0.58 -0.32 -1.35 0.99 2.52 3.33 0.72 -0.52 -3.83 -5.27 -0.91 -2.23 -0.66 2.77 0.78 1.14 0.1 -2.2 -1.43 -0.95 -3.17 -2.07 -5.13 -1.02 -5.46 -1.23 -2.24 -0.95 -0.78 -3.65 -2.2 -1.87 -1.79 -3.03 -1.14 -0.61 -3.11 -0.99 -2.11 -1.34 -1.06 -1.78 -3.63 -0.2 -2.09 -1.43
-3.85 -1.21 0.11 -1.45 -2.23 2.85 3.28 3.41 -3.37 -2.96 -2.42 -4.35 -1.49 -4.74 -1.73 0.28 -1.27 -3.8 -1.72 -0.34 -0.43 -1.16 - -0.13 2.2 -2.4 2.78 - - -6.93 -6.04 - - - - -5.04 - -4.83 - -3.32 - - -1.56 - - - -4.83 -
- - - - - - - 5.47 - - - - - - - - - - - - - - - - 1.93 - - - - - - - - - - - - - - - - - - - - - - -
0.39 0.03 -0.37 -4.15 -0.48 2.09 2.43 2.82 0.45 -0.08 -0.98 -0.97 -1.62 -1.8 -0.23 - -0.38 -0.08 1.33 0.28 -0.66 0.78 0.29 0.3 0.79 -0.12 0.98 -1.23 -3.58 -1.92 -0.7 -2.51 -1.59 -3.97 -4.06 -3.12 -3.63 0.04 -1.87 -1.75 -2.02 -0.28 -0.64 -0.99 -4.67 0.1 -4.2 -0.8
- - - - - - - 4.9 - - - - - - - - - - 4.18 - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- -0.41 0.34 1.95 0.33 1.96 2.32 3.05 0.74 0.04 -0.69 -0.1 -0.66 -1.22 -0.65 -0.81 0.31 0.57 -2.29 -0.82 -2.35 -4.31 0.73 -2.11 0.16 0.68 -0.55 -1.37 -2.74 -1.12 -0.37 -0.65 -2.31 -2.85 -2.36 -3.35 -2.26 -0.33 -3.68 -1.95 -0.92 -0.57 -2.69 -1.21 -2.91 -0.31 -0.67 -1.31
- - - 0.41 -0.25 3.95 3.59 3.9 - - - - - - - - 0.74 - - - - - - - - 0.75 - - - - - - - - - - - - - - - - - - - - - -
-0.49 -0.19 - 0.15 -0.64 3.09 3.11 4.07 1.91 - - - - - -4.61 - 1.44 - - - - - - - - 2.1 - - - - - - - - - - - - - - - - - - - - - -
- - - - - 3.82 4.0 3.76 - -1.14 - - -0.78 - - - - - - - - - - - - - -0.29 - -0.88 - - - - - - - -0.19 - - 0.05 - - - - - - - -
- - 2.18 -0.87 0.64 2.83 3.11 3.88 - -2.98 - -1.46 -2.61 - -1.85 - 0.41 0.93 -1.04 - 0.01 0.25 -0.75 -1.18 -1.09 0.74 - - - -3.09 - - - - - - -2.25 - - - - - -1.8 - - -2.3 - -3.89
- - - 1.58 1.28 2.17 3.79 2.89 -2.26 -2.12 -1.39 -3.57 -2.94 -0.13 -4.65 - -1.94 -0.62 - -2.15 -1.97 -1.27 -1.38 - -0.93 -0.53 -3.24 -1.37 0.51 -0.99 -2.55 -2.59 -2.1 -0.88 1.99 - - -2.12 -2.74 -1.52 -0.11 -1.2 -1.53 -1.79 -1.95 -1.66 -1.22 -2.44
- - - - 3.06 - - 5.31 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - -1.12 2.83 4.28 3.82 - -1.2 - - - - - 2.08 - - - - - - - - 0.16 - - 0.14 - - - - - - - - - - - - - - - - - - - -
- - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 1.21 1.77 1.23 4.3 - - - - -0.42 - - - - - - - - - - - 1.98 - 2.01 0.44 1.67 -2.7 -0.84 - - - - - - 1.09 - 1.13 - - 0.4 - - - - -0.6
- -0.29 -1.0 1.6 -2.44 2.7 2.61 3.7 - - -0.42 - - -0.89 - -0.75 - - - -1.21 -1.03 - 1.07 - - - - 1.73 -0.89 -3.47 -0.89 -1.49 -2.35 0.83 - - -0.78 0.63 - -1.57 - - 0.3 -1.75 0.1 -1.47 -0.98 -2.16
-1.29 -1.14 1.15 -0.74 -5.98 1.59 1.63 3.69 - -1.4 2.08 2.26 -0.73 -2.47 -1.42 -1.11 -0.28 1.14 -2.74 -1.48 -1.69 -1.76 -2.45 1.7 -1.38 0.52 -0.73 -3.15 -3.31 -1.75 -1.79 -3.53 -2.92 -3.22 -2.31 -1.92 -4.95 -1.96 -3.18 -1.58 -1.41 -1.17 -1.6 -4.28 -3.06 -1.8 -4.8 -1.62
- - - - - - 4.05 4.94 - - - - - - - - - - - - - - - - - - - - - -0.34 - - - - - - - - - - - - - - - - - -
- - - 1.87 1.28 2.34 4.24 4.0 - - - - - - - - 1.0 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 0.24 0.63 0.46 -1.32 2.12 2.88 3.27 1.34 -1.85 -3.44 - -0.7 -0.58 -1.4 -1.05 0.37 -2.57 - -5.21 - -5.34 - - -0.82 -0.67 -2.52 -1.09 -0.69 -0.4 -0.88 -5.64 -2.51 -1.23 -2.98 -2.61 -1.94 -0.5 -1.95 -1.03 1.22 1.22 -0.93 -0.27 -1.2 -0.37 -0.87 0.56
- -0.89 0.53 -1.0 -1.5 2.25 2.89 3.83 0.41 -1.8 -5.68 -5.01 -2.71 -5.1 -1.39 1.7 0.2 1.52 -2.84 -2.33 -0.75 -1.34 - -1.95 -2.9 -1.41 - -0.01 -1.21 -0.82 -1.39 -1.93 -1.53 -1.66 -2.44 -0.65 -1.01 -1.17 -1.81 -2.25 -3.18 -3.82 -3.33 -2.79 -2.33 -2.21 -1.44 -1.51
- - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 1.48 4.39 - 4.58 - - - - - - - - - - - - - - - - - - - - - -1.45 - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.