Heatmap: Cluster_150 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g010740.3.1 (Solyc01g010740.3)
- - -6.79 - -4.99 -6.93 -8.61 - 1.5 2.57 -6.46 - - - -3.33 -4.44 -0.57 2.3 4.28 - - - - - - - - - - - - - - -
Solyc01g056220.2.1 (Solyc01g056220.2)
- - - - - -6.54 - - 0.12 2.29 - - - -3.1 - - 0.54 3.43 3.93 - -1.94 - - -4.11 - - - - -3.41 - - - - -
Solyc01g057220.3.1 (Solyc01g057220.3)
-3.6 - -3.17 -7.28 -2.24 -4.99 -6.27 -7.63 -0.32 1.3 -4.54 -5.18 -7.46 - -4.41 -4.43 -0.79 2.99 4.43 - - - -8.17 -7.91 - - - - - - -6.18 - - -5.49
Solyc01g097960.3.1 (Solyc01g097960.3)
- - - - -6.36 -9.03 - - 2.24 2.2 -7.87 -6.9 - -5.16 -3.91 -4.84 -1.86 3.48 3.69 - -9.34 -6.27 -7.16 -6.22 -7.26 - -6.13 -6.18 -6.63 -6.87 -5.3 -6.9 - -
Solyc01g110320.3.1 (Solyc01g110320.3)
-8.52 -3.06 -3.23 -2.26 -1.1 -4.83 -7.04 -4.7 0.41 -0.06 -8.17 -8.58 -9.0 - 0.37 0.3 0.6 3.17 4.14 - - -8.05 -8.59 - -8.82 - - -9.57 -7.96 -7.68 - - - -6.92
Solyc02g005420.1.1 (Solyc02g005420.1)
- - - - - - - - 1.59 2.68 - - - - -0.43 1.63 -1.08 3.46 3.22 - - - - - - - - - - - - - - -
Solyc02g067000.2.1 (Solyc02g067000.2)
-5.74 -4.33 -4.33 -2.82 -5.93 -5.75 -4.48 -4.68 1.84 2.82 -3.76 -4.78 -4.89 -5.94 -2.52 -3.86 -0.87 1.9 4.16 - -9.13 -3.38 -4.01 -3.81 -6.11 - -6.62 -5.59 -6.4 -4.95 -3.02 -6.83 -9.27 -5.36
Solyc02g083440.3.1 (Solyc02g083440.3)
- -6.54 -6.56 -8.23 - -7.6 - - 1.55 2.62 -8.03 -8.05 -7.99 - -3.43 -6.65 -0.78 3.09 3.97 - -8.23 - -8.8 - - - - -10.23 -7.72 - -8.81 -9.44 - -
Solyc02g094380.2.1 (Solyc02g094380.2)
-3.11 -6.84 -0.54 -0.38 -4.09 -5.44 -3.33 -5.63 0.7 2.0 -5.8 -6.5 -3.64 -5.32 1.28 2.89 1.58 2.22 3.11 -6.97 - -6.93 - -6.25 -7.59 - -5.25 -6.6 -4.43 -4.73 -7.38 -4.13 -5.62 -2.79
Solyc03g007950.3.1 (Solyc03g007950.3)
-2.73 - -3.43 -4.44 -7.48 -3.16 -4.71 -5.82 0.78 1.69 0.19 0.09 -2.14 -3.12 -3.4 -3.05 0.43 2.85 4.05 -8.89 -3.04 -6.12 -2.66 -4.07 -4.02 - -7.02 -5.31 -5.2 -7.05 -4.5 -4.02 - -3.09
Solyc03g079900.3.1 (Solyc03g079900.3)
-5.75 -3.68 -6.47 -4.5 -3.67 -2.58 -2.54 -3.02 0.79 1.66 -2.23 -1.75 -3.14 -4.59 0.52 -0.35 0.19 3.36 2.99 -3.24 -4.07 -0.91 -1.95 -1.03 -1.42 -7.44 -0.04 -0.24 -0.3 -0.74 -1.15 -0.97 -5.54 -2.25
Solyc03g113150.3.1 (Solyc03g113150.3)
-3.74 - -5.34 -4.29 - -5.27 -6.25 - 1.04 1.6 -5.69 -3.6 -7.96 -5.62 -2.86 -2.61 0.23 1.72 4.49 -5.81 - -2.61 -4.24 -3.34 -2.86 - -4.43 -3.16 -2.74 -3.31 -3.26 -1.68 - -5.11
Solyc03g118140.3.1 (Solyc03g118140.3)
-1.91 - -2.5 -2.63 -0.98 -0.25 -0.0 0.22 1.16 2.77 -7.44 -8.0 -4.88 -4.13 -1.33 -1.23 -0.62 1.92 2.92 -0.49 0.33 -1.44 -3.74 -1.6 -0.36 -0.7 -2.2 -1.21 -0.38 -1.63 -1.64 -0.13 -0.61 -2.9
Solyc04g005140.2.1 (Solyc04g005140.2)
-2.49 -0.97 -1.95 -1.0 -1.74 -3.28 -2.02 -3.21 0.62 2.85 -3.85 -4.03 -2.36 -2.65 -1.37 -1.29 -0.63 2.91 3.57 -4.23 -4.86 -3.1 -3.31 -3.51 -2.88 -4.1 -2.03 -2.47 -1.72 -3.02 -3.05 -3.92 -7.12 -3.47
Solyc04g015260.1.1 (Solyc04g015260.1)
-7.7 - - -6.88 - - - - 2.58 2.08 - - -6.7 - -2.81 -4.03 -0.97 1.9 4.17 - -7.33 -5.08 - -5.45 -3.01 - - -4.45 -0.35 -6.18 - -1.83 - -
Solyc04g045315.1.1 (Solyc04g045315.1)
- - - - - - - - 1.97 3.78 -3.11 - - - - - - - 4.02 - - - - - - - - - - - - - - -
Solyc04g051090.2.1 (Solyc04g051090.2)
- - - - - - - - 2.19 3.87 -3.85 - - - - - - -1.53 3.84 - - - - - - - - - -4.8 - - - - -
Solyc04g056492.1.1 (Solyc04g056492.1)
- - - - - - - - 1.84 3.21 - - - - - - -2.5 1.89 4.1 - - - - - - - - -3.67 - - - - - -
Solyc04g056494.1.1 (Solyc04g056494.1)
- - - - - - - - 1.34 1.17 - - - - - - -1.97 2.37 4.57 - - - - - - - - - - - - - - -
Solyc04g072480.3.1 (Solyc04g072480.3)
- - - - -2.92 -3.76 - - 0.59 2.91 - - -3.32 - - - -3.16 0.81 4.01 - -2.4 -2.58 - -4.34 -2.0 - -2.04 0.4 1.75 -3.6 -2.67 -0.22 - -
Solyc05g007920.2.1 (Solyc05g007920.2)
- - - - - -6.01 -5.99 - 1.0 2.34 - - - - - -2.84 -0.9 3.04 4.15 - - -5.72 - -7.68 -5.58 - - -5.3 -5.69 -3.44 -5.1 - - -4.68
Solyc05g008080.2.1 (Solyc05g008080.2)
-3.18 -6.8 -1.18 -2.93 -2.92 -1.59 -3.56 -2.4 1.79 2.05 -3.78 -4.56 -6.0 - -0.82 -0.41 -0.02 2.5 4.01 -3.28 -4.57 -5.12 -4.16 -3.72 -4.47 -4.15 -7.55 -6.95 -6.79 - -7.75 -7.48 -3.79 -1.85
Solyc05g012570.3.1 (Solyc05g012570.3)
-5.06 -8.92 -5.68 - -1.21 -7.64 -4.73 -8.43 2.08 2.81 -5.17 -4.5 -5.44 -5.77 -3.64 -4.98 -1.28 2.61 3.95 - -8.89 -7.26 -6.7 -6.8 -8.07 - - -10.15 -7.95 -9.09 - - -10.26 -5.14
Solyc05g026370.2.1 (Solyc05g026370.2)
- - - - -4.28 -5.08 - - 1.19 - - - - - -5.53 -4.37 -2.03 3.67 4.1 - - -4.62 - -4.09 -2.23 -1.5 - -4.44 -1.7 -4.72 -6.03 -1.2 - -
Solyc05g049870.3.1 (Solyc05g049870.3)
- - - - -8.14 -10.96 -6.49 - 2.19 2.9 - -8.57 -7.29 - -4.75 -7.47 -1.17 3.03 3.73 - - -9.51 -7.85 -9.16 - - -9.01 -6.68 -5.68 - - -7.85 - -9.09
Solyc05g053450.3.1 (Solyc05g053450.3)
- - - - -11.07 - - - 1.97 2.73 -6.9 -9.98 - -9.35 -3.06 -4.04 -1.22 2.71 4.03 -10.7 -10.07 - - -12.64 -11.82 - -10.73 -11.76 -10.21 - - - - -
Solyc05g053565.1.1 (Solyc05g053565.1)
- - - - - -7.06 - - 0.75 3.54 - -6.48 - - -3.95 -4.6 -0.79 2.88 3.66 - - - - - - - - - - - - - - -
Solyc05g056180.1.1 (Solyc05g056180.1)
-4.42 -6.06 - - - -6.29 -3.91 -4.36 -0.23 2.22 -5.16 -6.01 - -4.58 -4.27 -2.16 -0.33 3.26 4.13 - - -6.64 - -6.58 -6.58 - -4.76 -7.63 -6.83 -6.3 -5.98 - - -
Solyc06g005390.1.1 (Solyc06g005390.1)
-2.94 2.2 -0.65 2.0 -2.89 -0.86 -0.22 0.36 0.96 0.95 -0.76 0.89 -1.94 -0.59 -2.61 -3.41 -2.04 2.58 1.5 -1.39 -3.33 -1.33 -0.76 -1.09 -1.37 -1.53 -1.01 -1.43 -1.3 -1.76 -1.21 -2.18 -2.99 -2.11
Solyc06g007490.2.1 (Solyc06g007490.2)
-3.01 -3.39 -2.17 -2.8 -4.31 -2.84 -2.21 -3.68 0.9 1.82 -1.72 -2.07 -0.18 -0.73 -0.86 -0.51 0.26 2.89 3.78 -2.74 -1.51 -3.62 -3.21 -3.21 -4.25 -3.18 -2.68 -2.62 -3.01 -3.05 -2.84 -4.44 -4.52 -3.12
Solyc06g008640.2.1 (Solyc06g008640.2)
- -8.76 - - - - - - 0.7 2.09 - - - - -2.67 -2.56 0.62 3.55 3.86 - - -9.68 - - - - - -9.21 - - -7.57 - - -
Solyc06g075020.3.1 (Solyc06g075020.3)
-5.93 - - -5.08 -3.79 -3.97 -0.94 -1.55 1.22 2.51 -1.32 -0.78 -4.92 -1.11 -3.58 -4.53 -0.76 3.33 3.56 - - -3.65 -2.15 -3.39 -5.98 - -2.83 -3.94 -3.49 -4.17 -2.95 - - -
Solyc06g076980.3.1 (Solyc06g076980.3)
-7.01 - - - -6.58 -3.89 - - 1.09 2.54 -6.7 - -8.13 -6.93 -4.35 -4.47 -0.83 3.41 3.88 - - - - - - - - - -8.75 - - - - -
Solyc06g083610.3.1 (Solyc06g083610.3)
- -9.47 -7.47 -9.33 - -9.73 - -9.3 2.56 2.32 -9.07 - -9.4 -9.31 -2.7 -3.16 0.36 2.18 4.09 - -9.32 - -9.03 -10.33 -8.62 - -8.18 -10.45 -8.78 -9.57 -9.26 -8.65 - -7.31
Solyc07g008580.2.1 (Solyc07g008580.2)
- - - -3.25 -4.57 -2.86 -1.47 - 2.07 1.67 -3.6 -3.72 - -3.64 -1.09 -2.2 0.25 2.43 4.18 - -3.57 - - -6.13 -5.13 - -4.76 - -4.25 - - -4.3 - -3.16
Solyc07g039650.1.1 (Solyc07g039650.1)
- - - - - - - - 2.02 1.28 - - - - - - - 1.53 4.62 - - - - - - - - - - - - - - -
Solyc07g039660.1.1 (Solyc07g039660.1)
- - - - - - - - -0.26 0.73 - - - - - - - 4.05 3.9 - - - - - - - - - - - - - - -
Solyc07g052330.2.1 (Solyc07g052330.2)
- -1.71 -3.24 0.48 - -3.84 -3.73 -1.67 0.72 1.82 - - - -3.06 -1.35 - -1.93 3.51 3.84 -4.55 - - - - - - - - - - - - - -
Solyc08g008260.2.1 (Solyc08g008260.2)
-5.12 - - - -6.24 -8.94 - - 0.15 3.02 -6.11 -4.86 - - -3.7 -4.65 -2.3 3.34 3.83 -5.31 - - - - - - - - -4.87 - - - - -
Solyc09g014995.1.1 (Solyc09g014995.1)
-4.6 - - - -4.85 -5.31 - - 2.1 2.81 - - - - -4.57 -5.41 -1.64 2.49 4.04 - -6.59 - -7.63 -8.28 - - -5.45 -7.3 -8.51 - - -5.48 - -3.63
Solyc09g061960.3.1 (Solyc09g061960.3)
- - -10.07 - - -8.5 -5.25 -7.28 2.62 2.03 - -10.55 -7.88 -9.56 -4.21 -4.52 -0.77 2.12 4.22 -8.48 -7.93 - - -12.98 - - - -9.45 -9.67 - - - - -9.98
Solyc09g064670.2.1 (Solyc09g064670.2)
- - - - - -3.85 - - -1.15 2.06 - -1.67 - - - - -2.58 3.44 4.17 - - - - - - - - - - - - - - -
Solyc09g074800.2.1 (Solyc09g074800.2)
- - - - - - - - 0.29 0.86 - - - - -4.58 - 0.2 3.11 4.4 - - - - - - - - - - - - - - -
Solyc09g083180.3.1 (Solyc09g083180.3)
- - - - -8.21 -9.37 - - 0.45 1.34 -8.5 - - - -4.05 -3.46 -0.33 3.36 4.24 - - - - - - - - -9.55 - - - - - -
Solyc09g091040.3.1 (Solyc09g091040.3)
- - - - - -11.64 - - 2.12 2.43 -10.69 - -11.2 - -3.02 -4.56 -1.4 2.97 3.99 -9.33 -10.38 - - -11.86 - - -11.33 -11.54 -11.77 - -9.87 - - -
Solyc10g017650.2.1 (Solyc10g017650.2)
- - - -1.81 - - - - 2.31 3.15 - - - - -2.37 - -2.08 3.05 3.47 - - - - - - - - -4.26 -4.52 - - - - -
Solyc10g054130.2.1 (Solyc10g054130.2)
- - - - -4.7 -3.09 -6.33 -0.89 0.81 2.0 -7.5 - -6.57 - -3.46 -5.21 -1.37 3.58 3.91 - - - - - - - - -9.04 - - - - -6.32 -
Solyc10g055710.2.1 (Solyc10g055710.2)
-1.72 -3.62 -2.3 -3.65 -3.42 -2.14 -0.95 -2.47 -1.03 2.32 -2.41 -0.94 -2.2 -3.18 -0.69 -1.28 -0.48 3.25 3.28 -1.2 -0.24 -1.8 -3.59 -2.66 -1.9 -4.12 -2.15 -2.03 -2.37 -2.03 -1.97 -1.66 -6.07 0.2
Solyc10g061840.2.1 (Solyc10g061840.2)
- - - - - -9.02 - - 0.36 2.19 -7.34 - -6.85 - -0.7 -0.36 0.84 3.52 3.75 -6.01 - - - - - - -7.33 -7.15 - -6.51 - - - -
Solyc10g082010.1.1 (Solyc10g082010.1)
- - - - - -8.27 - - -0.41 1.26 - -6.15 - - - -5.26 -0.61 3.26 4.36 - - - - - - - - - - - - - - -
Solyc11g068355.1.1 (Solyc11g068355.1)
- - - - - -5.72 - - 0.9 2.24 - - - - - - -1.36 3.59 3.9 - - - - - - -3.54 - - - - - - - -
Solyc12g005460.1.1 (Solyc12g005460.1)
- - - - - - - - 1.67 2.08 - -8.59 - - -4.91 -5.39 -1.21 3.15 4.11 - - - - -10.47 -9.05 - - -10.31 - - -8.56 - - -
Solyc12g007150.2.1 (Solyc12g007150.2)
-0.46 -1.58 2.05 -1.39 -2.19 -0.83 -3.05 -1.64 -0.28 1.89 1.27 -1.62 -1.65 -3.62 -2.38 -3.75 -1.28 1.32 3.43 -9.61 -3.33 -0.82 -1.11 -1.66 -2.09 -8.18 -0.76 -1.29 -2.21 -0.56 -0.48 -0.66 -2.72 -1.03
Solyc12g036260.1.1 (Solyc12g036260.1)
- - - - - - - - 0.01 1.14 - - - - - -4.25 -0.23 3.23 4.36 - - - - - - - - - - - - - - -
Solyc12g040800.2.1 (Solyc12g040800.2)
-1.89 - - -10.6 -4.99 -2.34 -8.08 -5.36 1.25 2.15 -4.79 -3.67 -6.5 -6.57 -0.75 -0.38 0.55 1.8 3.93 -3.34 -0.65 -1.99 -4.42 -2.41 -1.62 -0.22 -3.36 -1.58 -0.21 -1.89 -2.15 -0.59 -3.85 -4.96
Solyc12g056060.2.1 (Solyc12g056060.2)
0.42 0.38 -6.04 -0.3 -5.26 - - - -0.03 2.94 -5.13 -5.47 -6.21 - -5.11 - -1.27 2.31 3.97 - - - - - - - - - - - - - - -0.64
Solyc12g056420.2.1 (Solyc12g056420.2)
-1.8 -2.01 1.78 1.64 -3.64 -2.51 -7.47 -2.83 0.85 2.12 -6.76 -6.4 - -8.34 -0.17 0.23 0.43 2.25 3.58 - -4.66 -6.41 -6.5 -6.05 -7.31 -6.42 -8.37 -6.4 -6.43 - -5.25 -7.4 -7.57 -4.35
Solyc12g097090.2.1 (Solyc12g097090.2)
- - - - - -10.45 - - 0.76 2.47 - - - -9.61 -3.31 -3.68 -0.51 2.71 4.27 - - - - - -10.39 - - -9.24 -9.47 - -8.59 - - -8.13
Solyc12g098400.2.1 (Solyc12g098400.2)
-0.62 -5.86 - -4.64 0.63 -2.41 - -3.19 -0.2 2.65 - - - - -3.29 -4.22 -0.89 2.89 4.0 -4.96 -5.81 - -5.69 -7.98 - - -6.53 - -7.13 - - - - -3.42
Solyc12g099230.2.1 (Solyc12g099230.2)
- - - - - -10.9 - - 0.77 1.9 -9.25 - - - -4.3 -8.41 -0.11 3.2 4.2 - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.