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Heatmap: Cluster_7 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00188420 (evm_27.TU.AmTr_v1.0_scaffold00002.166)
 0.0 0.0 0.0 0.0 0.65 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.31 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.48 0.0
AMTR_s00002p00241060 (evm_27.TU.AmTr_v1.0_scaffold00002.303)
 0.0 0.0 0.0 0.0 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.21 0.0
AMTR_s00005p00222780 (evm_27.TU.AmTr_v1.0_scaffold00005.96)
 0.0 0.0 0.0 0.0 0.76 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 8.05 0.0
AMTR_s00005p00262510 (evm_27.TU.AmTr_v1.0_scaffold00005.208)
 0.0 0.0 0.0 0.0 0.44 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.37 0.0
AMTR_s00005p00267410 (evm_27.TU.AmTr_v1.0_scaffold00005.237)
 0.0 0.0 0.0 0.05 0.44 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 1.88 0.0
AMTR_s00008p00050730 (evm_27.TU.AmTr_v1.0_scaffold00008.16)
 0.0 0.0 0.0 0.0 0.87 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 4.96 0.0
AMTR_s00012p00139640 (evm_27.TU.AmTr_v1.0_scaffold00012.74)
 0.0 0.0 0.0 0.0 0.59 0.0 0.0 0.0 0.02 0.02 0.0 0.0 0.06 0.07 0.14 0.0 0.2 0.37 0.19 0.0 2.34 0.03
AMTR_s00016p00205730 (evm_27.TU.AmTr_v1.0_scaffold00016.172)
 0.0 0.0 0.0 0.0 0.74 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.1 0.0 0.03 0.0 0.0 0.0 0.0 0.0 2.39 0.0
AMTR_s00020p00178140 (evm_27.TU.AmTr_v1.0_scaffold00020.69)
 0.0 0.0 0.0 0.0 0.25 0.0 0.04 0.0 0.03 0.0 0.0 0.0 0.04 0.11 0.0 0.0 0.0 0.0 0.0 0.0 2.22 0.0
AMTR_s00027p00247610 (evm_27.TU.AmTr_v1.0_scaffold00027.159)
 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.23 0.0
AMTR_s00029p00040430 (evm_27.TU.AmTr_v1.0_scaffold00029.27)
 0.0 0.0 0.0 0.0 3.41 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.25 0.0 0.0 0.0 0.0 0.0 0.0 0.0 15.61 0.0
AMTR_s00034p00231310 (evm_27.TU.AmTr_v1.0_scaffold00034.110)
 0.0 0.0 0.0 0.0 0.21 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.82 0.0
AMTR_s00037p00187770 (evm_27.TU.AmTr_v1.0_scaffold00037.94)
 0.0 0.0 0.0 0.0 0.53 0.0 0.09 0.0 0.03 0.0 0.0 0.0 0.03 0.09 0.02 0.0 0.0 0.0 0.0 0.0 3.83 0.0
AMTR_s00039p00097850 (evm_27.TU.AmTr_v1.0_scaffold00039.54)
 0.0 0.0 0.0 0.04 1.71 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.02 0.02 0.0 0.0 0.6 0.0 0.04 8.13 0.0
AMTR_s00044p00226890 (evm_27.TU.AmTr_v1.0_scaffold00044.248)
 0.0 0.0 0.0 0.0 0.89 0.0 0.03 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 4.41 0.0
AMTR_s00045p00033260 (evm_27.TU.AmTr_v1.0_scaffold00045.10)
 0.0 0.0 0.0 0.0 0.44 0.0 0.03 0.0 0.02 0.0 0.0 0.0 0.0 0.01 0.01 0.0 0.0 0.16 0.0 0.01 1.15 0.02
AMTR_s00047p00082760 (evm_27.TU.AmTr_v1.0_scaffold00047.29)
 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.26 0.0
AMTR_s00052p00138640 (evm_27.TU.AmTr_v1.0_scaffold00052.42)
 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.04 0.44 0.0
AMTR_s00055p00198240 (evm_27.TU.AmTr_v1.0_scaffold00055.136)
 0.0 0.0 0.0 0.0 0.33 0.0 0.0 0.0 0.05 0.03 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.1 3.51 0.0
AMTR_s00058p00151490 (evm_27.TU.AmTr_v1.0_scaffold00058.122)
 0.0 0.0 0.0 0.0 0.36 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.82 0.0
0.0 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.04 0.01 0.0 0.0 0.02 0.03 0.0 0.0 0.0 0.0 0.0 0.05 1.34 0.0
AMTR_s00060p00215620 (evm_27.TU.AmTr_v1.0_scaffold00060.166)
 0.0 0.0 0.0 0.04 0.34 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.39 0.0
AMTR_s00062p00116610 (evm_27.TU.AmTr_v1.0_scaffold00062.97)
 0.0 0.0 0.0 0.43 1.61 0.0 0.05 0.21 0.07 0.04 0.0 0.0 0.3 0.28 0.04 0.0 0.0 0.0 0.0 0.08 11.5 0.19
AMTR_s00068p00126190 (evm_27.TU.AmTr_v1.0_scaffold00068.83)
 0.0 0.0 0.0 0.0 0.88 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.22 0.07 0.09 0.0 0.0 0.0 0.0 0.0 2.26 0.31
AMTR_s00069p00142110 (evm_27.TU.AmTr_v1.0_scaffold00069.108)
 0.0 0.0 0.0 0.0 0.49 0.0 0.0 0.0 0.0 0.02 0.16 0.0 0.02 0.02 0.06 0.0 0.0 0.0 0.0 0.0 3.98 0.04
AMTR_s00072p00127880 (evm_27.TU.AmTr_v1.0_scaffold00072.68)
 0.0 0.0 0.0 0.2 2.41 0.0 0.06 0.0 0.19 0.09 0.23 1.53 0.38 1.28 0.87 0.0 0.93 1.34 1.32 0.87 13.87 0.1
AMTR_s00072p00158720 (evm_27.TU.AmTr_v1.0_scaffold00072.97)
 0.0 0.0 0.0 0.03 0.38 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.02 0.0 0.0 0.11 0.0 0.0 0.0 3.57 0.0
AMTR_s00075p00082070 (evm_27.TU.AmTr_v1.0_scaffold00075.19)
 0.0 0.0 0.0 0.0 0.49 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.03 0.0 0.0 0.0 0.0 0.0 2.58 0.0
AMTR_s00076p00173930 (evm_27.TU.AmTr_v1.0_scaffold00076.65)
 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.01 0.0 0.0 0.0 0.0 0.0 0.28 0.0
AMTR_s00078p00059300 (evm_27.TU.AmTr_v1.0_scaffold00078.32)
 0.0 0.0 0.0 0.0 0.75 0.0 0.0 0.0 0.08 0.15 0.0 0.0 0.08 0.21 0.0 0.0 0.0 0.0 0.0 0.0 9.73 0.12
0.0 0.0 0.0 0.0 0.88 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.02 0.0 0.0 0.0 0.0 0.0 6.11 0.0
AMTR_s00086p00161100 (evm_27.TU.AmTr_v1.0_scaffold00086.98)
 0.0 0.0 0.0 0.0 0.38 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.04 0.04 0.0 0.0 0.0 0.0 0.0 0.0 5.2 0.0
AMTR_s00088p00166360 (evm_27.TU.AmTr_v1.0_scaffold00088.139)
 0.0 0.0 0.0 0.0 0.28 0.0 0.0 0.0 0.0 0.0 0.11 0.0 0.04 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.93 0.0
AMTR_s00089p00176830 (evm_27.TU.AmTr_v1.0_scaffold00089.102)
 0.0 0.0 0.0 0.0 0.65 0.0 0.04 0.0 0.03 0.05 0.0 0.0 0.11 0.0 0.21 0.0 0.2 0.76 0.0 0.0 4.07 0.0
AMTR_s00095p00137240 (evm_27.TU.AmTr_v1.0_scaffold00095.98)
 0.0 0.0 0.0 0.0 3.57 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.19 0.31 0.7 0.0 0.0 0.0 0.0 0.0 17.11 0.31
AMTR_s00105p00035190 (evm_27.TU.AmTr_v1.0_scaffold00105.14)
 0.0 0.0 0.0 0.0 0.48 0.0 0.03 0.0 0.0 0.03 0.0 0.0 0.03 0.06 0.15 0.0 0.0 0.0 0.0 0.0 3.2 0.04
AMTR_s00112p00021200 (evm_27.TU.AmTr_v1.0_scaffold00112.4)
 0.0 0.0 0.0 0.0 1.31 0.0 0.01 0.02 0.02 0.02 0.36 0.38 0.17 0.17 0.07 0.09 0.0 0.56 0.31 0.27 7.75 0.09
AMTR_s00119p00034500 (evm_27.TU.AmTr_v1.0_scaffold00119.16)
 0.0 0.0 0.0 0.0 0.52 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.02 0.02 0.02 0.0 0.0 0.0 0.0 0.04 2.07 0.0
AMTR_s00133p00033390 (evm_27.TU.AmTr_v1.0_scaffold00133.7)
 0.0 0.0 0.0 0.11 0.74 0.0 0.01 0.0 0.0 0.01 0.0 0.0 0.05 0.03 0.05 0.0 0.0 0.0 0.0 0.03 3.63 0.0
AMTR_s00142p00023050 (evm_27.TU.AmTr_v1.0_scaffold00142.6)
 0.0 0.0 0.0 0.0 0.54 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.02 0.0 0.0 0.0 0.0 0.0 3.32 0.0
AMTR_s00148p00091020 (evm_27.TU.AmTr_v1.0_scaffold00148.61)
 0.0 0.0 0.0 0.0 0.55 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.03 0.06 0.11 0.0 0.0 0.0 0.0 0.0 5.75 0.16
AMTR_s00160p00015170 (evm_27.TU.AmTr_v1.0_scaffold00160.1)
 0.0 0.0 0.0 0.0 1.05 0.0 0.07 0.0 0.11 0.0 0.0 0.0 0.04 0.08 0.06 0.85 0.0 1.1 0.0 0.24 6.93 0.0
AMTR_s00389p00014340 (evm_27.TU.AmTr_v1.0_scaffold00389.4)
 0.0 0.0 0.0 0.0 0.74 0.0 0.0 0.0 0.22 0.03 0.0 0.0 0.21 0.07 0.28 0.51 0.0 0.0 0.33 0.06 2.37 0.26

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)