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Heatmap: Cluster_3 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00144750 (evm_27.TU.AmTr_v1.0_scaffold00001.126)
 0.0 0.0 0.11 0.0 2.74 0.0 0.26 1.57 1.65 0.93 0.0 0.0 0.0 0.26 0.26 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00004p00208750 (evm_27.TU.AmTr_v1.0_scaffold00004.209)
 0.0 0.0 0.0 0.0 2.11 0.0 0.0 15.71 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 18.55 0.0
AMTR_s00004p00270440 (evm_27.TU.AmTr_v1.0_scaffold00004.295)
 3.47 4.1 1.33 6.64 2.73 0.0 0.08 56.27 0.0 0.0 0.0 0.0 0.28 0.13 1.17 0.0 0.0 0.0 0.0 1.61 0.0 1.04
AMTR_s00006p00236460 (evm_27.TU.AmTr_v1.0_scaffold00006.107)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 2.15 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00006p00263270 (evm_27.TU.AmTr_v1.0_scaffold00006.246)
 0.0 0.0 0.0 0.0 2.62 0.0 0.0 3.06 0.09 0.07 0.0 0.0 0.26 0.0 0.93 0.0 0.0 0.0 0.0 0.33 0.0 0.16
1.14 0.45 4.12 1.28 3.17 6.08 0.0 8.79 0.0 0.12 0.0 0.0 0.49 0.62 0.81 1.42 0.0 0.0 0.27 0.06 0.0 0.92
AMTR_s00008p00267020 (evm_27.TU.AmTr_v1.0_scaffold00008.232)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
384.17 179.74 114.59 101.21 830.84 87.41 33.43 492.8 47.4 145.89 193.03 226.07 49.05 35.93 25.94 196.41 34.32 220.24 119.99 31.75 58.44 115.69
AMTR_s00016p00243330 (evm_27.TU.AmTr_v1.0_scaffold00016.263)
 0.0 0.22 0.46 0.14 0.0 0.0 0.05 1.6 0.0 0.03 0.0 0.0 0.06 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00018p00088890 (evm_27.TU.AmTr_v1.0_scaffold00018.39)
 0.0 0.0 0.0 1.78 0.6 0.0 0.0 9.36 0.11 0.03 0.62 0.0 0.3 0.23 0.76 0.0 0.0 0.0 0.0 0.04 10.48 0.0
AMTR_s00019p00098280 (evm_27.TU.AmTr_v1.0_scaffold00019.72)
 0.0 0.0 0.0 0.0 5.54 0.0 0.22 2.21 0.11 0.06 0.46 0.39 1.0 0.33 0.97 0.0 1.02 0.0 0.15 0.42 0.31 0.55
AMTR_s00022p00240150 (evm_27.TU.AmTr_v1.0_scaffold00022.340)
 0.0 0.0 0.0 0.3 0.43 0.0 0.1 2.64 0.3 0.54 0.0 0.0 0.61 0.23 0.5 0.0 0.0 0.0 0.0 0.23 0.0 0.2
AMTR_s00023p00127640 (evm_27.TU.AmTr_v1.0_scaffold00023.65)
 0.0 0.0 0.0 0.0 10.88 0.0 1.11 8.58 0.65 0.54 0.0 0.0 0.14 0.27 1.18 0.0 1.41 0.6 0.0 0.0 0.0 0.19
219.73 93.02 121.75 23.26 738.62 2.09 16.25 381.35 35.0 142.41 110.55 204.52 14.73 15.78 12.55 27.1 9.86 65.93 40.33 7.34 25.59 14.45
AMTR_s00025p00081620 (evm_27.TU.AmTr_v1.0_scaffold00025.63)
 0.0 0.0 0.0 0.0 0.23 0.0 0.0 0.23 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00028p00246660 (evm_27.TU.AmTr_v1.0_scaffold00028.141)
 0.0 0.0 0.0 0.11 0.04 0.0 0.04 7.01 0.37 0.09 0.0 0.0 0.03 0.0 0.08 0.0 0.0 0.0 0.0 0.05 7.77 0.0
AMTR_s00031p00169000 (evm_27.TU.AmTr_v1.0_scaffold00031.75)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00032p00158290 (evm_27.TU.AmTr_v1.0_scaffold00032.127)
 0.0 0.0 0.0 0.0 0.91 0.0 0.0 1.32 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00034p00228180 (evm_27.TU.AmTr_v1.0_scaffold00034.102)
 0.0 0.0 0.0 3.77 0.47 0.0 0.0 4.41 0.0 0.04 0.34 1.15 0.09 0.0 0.14 0.0 0.0 0.0 0.0 0.06 0.0 0.0
AMTR_s00034p00228210 (evm_27.TU.AmTr_v1.0_scaffold00034.104)
 0.0 0.0 0.0 0.1 0.07 0.0 0.06 3.02 0.0 0.03 0.24 0.0 0.08 0.0 0.04 0.0 0.0 0.0 0.0 0.05 1.28 0.0
AMTR_s00035p00078760 (evm_27.TU.AmTr_v1.0_scaffold00035.8)
 0.0 0.0 0.0 0.23 7.52 0.0 0.0 3.02 0.0 0.0 1.53 5.12 0.36 0.09 1.31 0.0 0.0 0.0 0.0 0.0 0.0 0.43
AMTR_s00042p00231080 (evm_27.TU.AmTr_v1.0_scaffold00042.79)
 0.0 0.0 0.0 0.0 0.86 0.0 0.0 5.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.93 0.1
AMTR_s00047p00088970 (evm_27.TU.AmTr_v1.0_scaffold00047.35)
 0.0 0.0 0.0 0.0 0.69 0.0 0.0 3.02 0.02 0.54 0.0 0.0 0.02 0.04 0.0 0.95 0.0 0.0 0.0 0.0 0.0 0.1
AMTR_s00050p00192490 (evm_27.TU.AmTr_v1.0_scaffold00050.57)
 0.0 0.0 0.0 3.15 4.61 0.0 0.0 26.96 0.0 0.0 0.6 0.0 0.04 0.05 0.48 0.0 0.0 0.0 0.4 0.18 2.39 0.12
0.0 0.0 0.0 0.0 3.03 0.0 0.27 9.3 0.43 0.55 0.09 0.34 0.18 0.09 1.53 14.68 0.69 0.15 0.0 0.06 0.26 0.36
AMTR_s00060p00019070 (evm_27.TU.AmTr_v1.0_scaffold00060.3)
 0.88 0.0 0.0 0.19 0.66 1.0 0.01 9.8 0.01 0.01 0.79 0.16 0.12 0.08 0.22 0.21 0.27 1.25 0.2 0.33 4.74 0.07
AMTR_s00062p00128410 (evm_27.TU.AmTr_v1.0_scaffold00062.104)
 2.4 0.26 3.69 2.34 28.23 14.88 0.44 24.3 1.19 9.69 0.91 0.0 0.23 1.08 0.87 0.0 0.0 5.49 1.23 0.13 0.0 0.79
AMTR_s00062p00132610 (evm_27.TU.AmTr_v1.0_scaffold00062.109)
 0.0 0.0 0.0 27.94 2.39 0.0 0.17 19.58 0.17 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.12 29.85 0.0
AMTR_s00067p00132980 (evm_27.TU.AmTr_v1.0_scaffold00067.116)
 0.0 0.0 0.0 0.0 0.79 0.0 0.27 5.72 0.33 0.26 0.0 0.54 0.0 0.03 1.04 0.0 0.25 0.0 0.0 0.0 0.0 0.0
AMTR_s00067p00154430 (evm_27.TU.AmTr_v1.0_scaffold00067.149)
 0.0 0.0 0.0 0.0 1.18 0.0 0.43 7.33 0.17 1.54 1.63 0.0 0.63 0.05 0.04 0.0 0.63 0.0 0.0 0.0 0.0 0.0
AMTR_s00068p00115190 (evm_27.TU.AmTr_v1.0_scaffold00068.69)
 0.0 0.0 0.0 0.07 0.02 0.0 0.0 1.28 0.0 0.02 0.52 0.0 0.13 0.0 0.12 0.0 0.0 0.51 0.0 0.14 0.92 0.04
AMTR_s00071p00099180 (evm_27.TU.AmTr_v1.0_scaffold00071.76)
 2.22 14.56 35.19 42.33 8.17 49.12 0.11 433.39 0.41 0.31 0.0 0.0 4.96 3.42 2.12 0.0 0.0 0.0 0.0 0.44 0.0 5.03
AMTR_s00072p00080450 (evm_27.TU.AmTr_v1.0_scaffold00072.33)
 0.0 0.0 0.0 0.0 0.33 0.0 0.0 2.58 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00073p00051040 (evm_27.TU.AmTr_v1.0_scaffold00073.11)
 0.0 0.0 0.0 1.85 0.81 0.0 0.03 7.16 0.24 0.25 0.0 0.0 0.05 0.02 0.05 0.0 0.0 0.0 0.0 0.05 0.49 0.05
AMTR_s00073p00178720 (evm_27.TU.AmTr_v1.0_scaffold00073.55)
 0.0 0.0 0.0 0.0 0.11 0.0 0.0 18.27 0.39 0.53 0.0 0.0 0.49 1.08 0.06 0.0 1.84 0.0 3.2 0.0 0.0 1.64
AMTR_s00074p00133470 (evm_27.TU.AmTr_v1.0_scaffold00074.44)
 0.0 0.0 0.0 0.0 0.26 0.0 0.06 5.32 0.1 0.47 0.73 0.83 0.65 0.11 0.05 0.0 0.78 0.0 0.0 0.0 0.0 0.21
AMTR_s00074p00144580 (evm_27.TU.AmTr_v1.0_scaffold00074.57)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.6 0.0 0.0 0.15 0.52 0.07 0.0 0.05 0.0 0.13 0.0 0.0 0.07 0.41 0.0
AMTR_s00082p00113410 (evm_27.TU.AmTr_v1.0_scaffold00082.21)
 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00084p00112620 (evm_27.TU.AmTr_v1.0_scaffold00084.32)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.37 0.09 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
1.25 0.0 0.0 0.0 4.33 0.0 1.66 5.45 2.85 2.58 0.0 0.0 0.07 0.31 1.19 0.0 0.09 0.0 0.0 0.0 0.0 0.15
AMTR_s00087p00180720 (evm_27.TU.AmTr_v1.0_scaffold00087.58)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.34 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00105p00072560 (evm_27.TU.AmTr_v1.0_scaffold00105.36)
 0.0 0.0 0.0 0.07 0.18 0.0 0.0 1.41 0.03 0.0 0.19 0.0 0.14 0.01 0.09 0.0 0.15 0.0 0.0 0.0 0.75 0.04
AMTR_s00109p00111120 (evm_27.TU.AmTr_v1.0_scaffold00109.105)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.02 0.0 0.05 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.07 0.0 0.03 2.85 0.01 0.03 0.1 0.0 0.06 0.0 0.02 0.0 0.17 0.0 0.0 0.0 0.0 0.07
AMTR_s00121p00083230 (evm_27.TU.AmTr_v1.0_scaffold00121.16)
 0.0 0.0 0.0 0.03 1.17 0.0 0.03 1.24 0.05 0.02 0.1 0.0 0.02 0.01 0.06 0.0 0.0 0.16 0.0 0.06 0.87 0.04
AMTR_s00125p00123960 (evm_27.TU.AmTr_v1.0_scaffold00125.34)
 0.0 0.08 0.09 0.0 0.0 0.72 0.03 2.19 0.02 0.1 0.92 0.81 0.07 0.03 0.04 0.0 0.41 0.0 0.0 0.0 0.0 0.72
AMTR_s00130p00119550 (evm_27.TU.AmTr_v1.0_scaffold00130.68)
 0.0 0.0 0.0 11.48 0.69 0.0 0.06 16.42 0.12 0.0 0.0 0.0 0.08 0.0 0.05 0.0 0.0 0.0 0.0 0.0 9.06 0.0
AMTR_s00139p00041420 (evm_27.TU.AmTr_v1.0_scaffold00139.4)
 10.18 0.0 0.0 4.28 3.59 0.0 0.0 21.68 0.0 0.0 0.38 0.0 0.16 0.03 0.37 0.0 0.24 0.0 0.0 0.43 18.98 0.0
AMTR_s00142p00034860 (evm_27.TU.AmTr_v1.0_scaffold00142.15)
 0.0 0.0 0.0 0.0 0.07 0.0 0.09 14.78 0.38 0.0 0.0 1.99 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00142p00080680 (evm_27.TU.AmTr_v1.0_scaffold00142.49)
 0.0 0.06 0.0 3.36 55.67 0.0 0.07 42.27 0.15 0.21 6.12 10.72 3.79 0.97 0.88 0.35 1.47 0.89 1.53 1.55 36.5 1.65
AMTR_s00143p00017360 (evm_27.TU.AmTr_v1.0_scaffold00143.2)
 0.0 0.0 0.63 0.0 3.71 0.0 0.05 2.64 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.48 0.0 0.0 0.0
AMTR_s00143p00023130 (evm_27.TU.AmTr_v1.0_scaffold00143.3)
 0.0 0.0 0.0 0.0 1.11 0.0 0.0 4.07 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.35 0.42 2.3 6.94 3.08 0.08 12.5 0.06 0.29 0.24 0.4 0.06 0.01 0.08 0.0 0.0 0.0 0.18 0.0 0.0 0.32
8.99 0.0 0.0 0.0 2.39 0.0 1.12 9.52 1.16 1.08 0.85 1.53 0.74 0.62 1.18 0.52 1.28 0.0 1.32 1.12 0.0 0.15
0.0 11.5 0.0 0.21 52.61 24.96 8.0 89.75 2.51 18.6 4.51 1.28 2.06 33.86 23.51 77.79 0.0 3.36 1.68 9.44 0.33 24.06
AMTR_s00172p00073980 (evm_27.TU.AmTr_v1.0_scaffold00172.10)
 0.0 0.0 5.35 5.4 2.36 0.0 0.0 19.21 0.0 0.0 0.0 0.0 0.08 0.0 0.58 0.0 0.97 0.0 0.0 0.29 21.15 0.0
AMTR_s00189p00031920 (evm_27.TU.AmTr_v1.0_scaffold00189.4)
 0.12 0.03 0.07 0.05 0.04 0.0 0.0 0.93 0.02 0.01 0.0 0.0 0.04 0.02 0.02 0.32 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00192p00024420 (evm_27.TU.AmTr_v1.0_scaffold00192.2)
 3.82 6.06 1.55 3.06 26.94 0.0 0.33 36.25 0.1 0.11 1.5 0.74 1.68 5.56 21.11 1.5 5.14 1.3 0.62 9.53 2.91 1.05
AMTR_s00348p00015270 (evm_27.TU.AmTr_v1.0_scaffold00348.1)
 0.0 0.0 0.0 0.0 4.66 18.18 6.25 104.61 16.03 13.6 3.02 0.0 0.0 0.96 1.29 0.0 0.0 0.0 0.0 0.24 8.04 0.0
AMTR_s00510p00009950 (evm_27.TU.AmTr_v1.0_scaffold00510.1)
 0.0 0.0 0.0 0.19 0.27 0.0 0.0 0.26 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00670p00010720 (evm_27.TU.AmTr_v1.0_scaffold00670.1)
 0.0 0.0 0.0 0.53 0.13 0.0 0.0 2.2 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s03368p00002350 (evm_27.TU.AmTr_v1.0_scaffold03368.2)
 0.0 0.0 0.0 0.0 0.0 0.0 0.59 2.91 0.34 0.24 0.0 0.0 0.06 0.35 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s04412p00001100 (evm_27.TU.AmTr_v1.0_scaffold04412.1)
 0.0 0.0 0.0 6.24 3.03 0.0 0.0 42.03 0.0 0.0 0.0 0.0 0.04 0.43 0.11 0.0 0.0 0.0 0.0 0.2 15.42 0.14
AMTR_s04785p00002600 (evm_27.TU.AmTr_v1.0_scaffold04785.1)
 0.0 0.0 0.0 23.26 2.51 0.0 0.0 31.84 0.09 0.09 0.0 0.0 0.11 1.13 3.73 0.0 0.0 0.0 0.0 0.0 28.52 0.0
AMTR_s04834p00002510 (evm_27.TU.AmTr_v1.0_scaffold04834.1)
 0.0 0.0 0.0 0.49 0.72 0.0 0.0 4.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s05552p00002570 (evm_27.TU.AmTr_v1.0_scaffold05552.1)
 0.0 0.28 10.0 32.68 20.95 0.0 0.0 17.52 0.04 0.04 0.0 0.0 0.0 0.0 0.16 0.0 0.25 0.0 0.0 0.0 14.48 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)