Heatmap: Cluster_104 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene	Egg apparatus cell (small)	Egg apparatus cell (medium)	Egg apparatus cell (large)	Ovary	Uninuclear microspore	Generative cell	Pollen	Sperm	Pollen tube (bicellular)	Pollen tube (tricellular)	Flower (bud, female)	Flower (bud, male)	Flower (female)	Flower (male)	Flower (tepals)	Fruit (female)	Apical meristem	Shoot (female)	Shoot (male)	Leaf (male)	Leaves	Root (male)
AMTR_s00003p00240400 (evm_27.TU.AmTr_v1.0_scaffold00003.253)	0.81	1.0	0.6	0.11	0.04	0.02	0.02	0.1	0.06	0.06	0.12	0.11	0.24	0.07	0.08	0.0	0.07	0.05	0.02	0.03	0.01	0.22
AMTR_s00006p00258700 (SLD5)	1.0	0.54	0.73	0.0	0.05	0.0	0.01	0.01	0.02	0.01	0.11	0.09	0.04	0.01	0.01	0.02	0.21	0.01	0.0	0.01	0.0	0.07
AMTR_s00009p00221230 (evm_27.TU.AmTr_v1.0_scaffold00009.159)	1.0	0.76	0.64	0.22	0.15	0.01	0.0	0.07	0.1	0.11	0.12	0.11	0.13	0.18	0.13	0.04	0.11	0.13	0.13	0.38	0.05	0.22
AMTR_s00009p00250010	1.0	0.87	0.62	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00010p00029920 (evm_27.TU.AmTr_v1.0_scaffold00010.13)	0.79	1.0	0.58	0.07	0.02	0.01	0.01	0.06	0.01	0.01	0.11	0.08	0.03	0.1	0.01	0.0	0.04	0.26	0.22	0.26	0.08	0.04
AMTR_s00010p00207190 (ERDJ3B)	1.0	0.87	0.32	0.0	0.07	0.01	0.0	0.0	0.0	0.0	0.0	0.0	0.01	0.02	0.05	0.0	0.0	0.01	0.0	0.0	0.0	0.09
AMTR_s00010p00232210 (AGT2)	0.76	0.76	1.0	0.02	0.18	0.22	0.14	0.04	0.12	0.11	0.23	0.23	0.17	0.07	0.07	0.11	0.22	0.11	0.11	0.03	0.07	0.19
AMTR_s00012p00092910 (evm_27.TU.AmTr_v1.0_scaffold00012.46)	0.55	1.0	0.68	0.0	0.07	0.15	0.05	0.0	0.01	0.03	0.11	0.22	0.15	0.1	0.05	0.01	0.13	0.08	0.06	0.02	0.01	0.28
AMTR_s00016p00214830 (evm_27.TU.AmTr_v1.0_scaffold00016.188)	0.45	1.0	0.84	0.0	0.01	0.01	0.0	0.0	0.0	0.0	0.06	0.04	0.02	0.0	0.0	0.0	0.02	0.02	0.01	0.0	0.01	0.47
AMTR_s00018p00253870 (evm_27.TU.AmTr_v1.0_scaffold00018.163)	0.89	1.0	0.9	0.08	0.01	0.0	0.0	0.0	0.0	0.0	0.17	0.15	0.05	0.02	0.02	0.0	0.14	0.12	0.1	0.19	0.0	0.03
AMTR_s00019p00190490 (LSB1)	0.68	0.99	1.0	0.16	0.22	0.03	0.0	0.0	0.0	0.01	0.17	0.36	0.06	0.01	0.02	0.0	0.27	0.05	0.04	0.05	0.01	0.55
AMTR_s00022p00089900 (evm_27.TU.AmTr_v1.0_scaffold00022.71)	1.0	0.64	0.9	0.03	0.05	0.02	0.0	0.0	0.0	0.01	0.02	0.02	0.06	0.15	0.1	0.0	0.01	0.0	0.01	0.01	0.0	0.03
AMTR_s00023p00249610 (evm_27.TU.AmTr_v1.0_scaffold00023.235)	0.64	0.85	1.0	0.03	0.29	0.06	0.0	0.0	0.0	0.0	0.03	0.03	0.05	0.04	0.01	0.02	0.03	0.0	0.01	0.04	0.08	0.04
AMTR_s00025p00128210 (evm_27.TU.AmTr_v1.0_scaffold00025.122)	0.64	1.0	0.32	0.0	0.02	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.01	0.0	0.01	0.0	0.0	0.0	0.0	0.01	0.01	0.06
AMTR_s00025p00233640 (evm_27.TU.AmTr_v1.0_scaffold00025.344)	0.85	0.57	1.0	0.0	0.01	0.02	0.0	0.0	0.0	0.0	0.0	0.01	0.01	0.0	0.0	0.0	0.07	0.01	0.01	0.01	0.0	0.2
AMTR_s00027p00127290 (CYP78A9)	0.57	1.0	0.44	0.1	0.04	0.01	0.0	0.0	0.0	0.0	0.06	0.24	0.05	0.02	0.04	0.0	0.04	0.04	0.04	0.43	0.23	0.07
AMTR_s00032p00108340 (evm_27.TU.AmTr_v1.0_scaffold00032.69)	0.67	1.0	0.92	0.0	0.19	0.0	0.01	0.0	0.02	0.01	0.02	0.0	0.03	0.03	0.19	0.0	0.0	0.06	0.0	0.09	0.06	0.02
AMTR_s00038p00155900 (RABH1e)	1.0	0.61	0.61	0.02	0.29	0.02	0.12	0.11	0.13	0.16	0.22	0.17	0.11	0.08	0.13	0.07	0.15	0.08	0.06	0.12	0.05	0.09
AMTR_s00040p00107140 (evm_27.TU.AmTr_v1.0_scaffold00040.75)	0.7	1.0	0.58	0.0	0.05	0.0	0.03	0.0	0.01	0.0	0.07	0.24	0.17	0.04	0.13	0.11	0.09	0.21	0.26	0.12	0.06	0.24
AMTR_s00041p00237070 (evm_27.TU.AmTr_v1.0_scaffold00041.298)	1.0	0.43	0.58	0.0	0.0	0.01	0.02	0.0	0.02	0.02	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00043p00128910 (evm_27.TU.AmTr_v1.0_scaffold00043.22)	1.0	0.45	0.49	0.0	0.0	0.01	0.0	0.0	0.0	0.0	0.01	0.04	0.0	0.01	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00044p00116500 (ARF1)	0.74	0.96	1.0	0.12	0.0	0.02	0.0	0.0	0.0	0.0	0.1	0.08	0.03	0.0	0.01	0.11	0.16	0.01	0.01	0.05	0.09	0.01
AMTR_s00048p00193240 (evm_27.TU.AmTr_v1.0_scaffold00048.154)	0.74	1.0	0.65	0.09	0.01	0.0	0.06	0.0	0.02	0.02	0.06	0.07	0.01	0.0	0.04	0.02	0.01	0.0	0.0	0.0	0.01	0.0
AMTR_s00049p00214620 (DRN)	0.72	1.0	0.39	0.0	0.02	0.0	0.0	0.0	0.01	0.01	0.0	0.0	0.0	0.0	0.01	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00055p00090070 (SYTB)	0.82	0.89	1.0	0.04	0.16	0.18	0.24	0.08	0.17	0.2	0.29	0.23	0.21	0.18	0.16	0.21	0.28	0.28	0.24	0.19	0.19	0.18
AMTR_s00055p00205140 (evm_27.TU.AmTr_v1.0_scaffold00055.143)	1.0	0.53	0.46	0.15	0.08	0.02	0.0	0.01	0.0	0.0	0.01	0.01	0.01	0.06	0.03	0.0	0.01	0.0	0.0	0.04	0.0	0.04
AMTR_s00061p00027740 (UBC37)	0.43	0.94	1.0	0.06	0.16	0.02	0.03	0.03	0.03	0.03	0.13	0.15	0.13	0.07	0.07	0.08	0.24	0.06	0.08	0.13	0.04	0.12
AMTR_s00061p00131740 (evm_27.TU.AmTr_v1.0_scaffold00061.109)	0.97	1.0	0.61	0.09	0.1	0.04	0.0	0.02	0.02	0.01	0.01	0.02	0.04	0.14	0.12	0.08	0.01	0.01	0.01	0.03	0.01	0.04
AMTR_s00063p00196210 (AR192)	0.59	1.0	0.86	0.0	0.16	0.01	0.0	0.0	0.0	0.0	0.12	0.14	0.08	0.08	0.06	0.16	0.19	0.17	0.1	0.08	0.08	0.07
AMTR_s00069p00136080 (evm_27.TU.AmTr_v1.0_scaffold00069.100)	1.0	0.87	0.64	0.01	0.02	0.01	0.02	0.02	0.01	0.01	0.03	0.02	0.05	0.02	0.02	0.01	0.02	0.08	0.02	0.07	0.03	0.09
AMTR_s00077p00099870 (GLY1)	1.0	0.57	0.44	0.22	0.06	0.02	0.02	0.04	0.08	0.05	0.08	0.11	0.04	0.1	0.05	0.05	0.06	0.08	0.09	0.04	0.08	0.03
AMTR_s00077p00103580 (WRKY53)	0.84	1.0	0.62	0.14	0.04	0.02	0.0	0.0	0.0	0.0	0.11	0.13	0.04	0.04	0.04	0.0	0.07	0.05	0.07	0.4	0.12	0.14
AMTR_s00088p00061690 (evm_27.TU.AmTr_v1.0_scaffold00088.37)	0.99	1.0	0.52	0.06	0.01	0.02	0.0	0.0	0.0	0.0	0.01	0.03	0.07	0.01	0.01	0.01	0.0	0.04	0.01	0.0	0.0	0.12
AMTR_s00106p00068380 (SPX3)	0.8	0.69	1.0	0.02	0.08	0.01	0.0	0.0	0.01	0.01	0.1	0.06	0.03	0.2	0.03	0.0	0.19	0.13	0.0	0.03	0.01	0.12
AMTR_s00106p00136770 (GATA4)	1.0	0.65	0.57	0.06	0.01	0.01	0.0	0.0	0.0	0.0	0.03	0.04	0.09	0.03	0.01	0.0	0.01	0.01	0.01	0.01	0.0	0.01
AMTR_s00107p00113580 (evm_27.TU.AmTr_v1.0_scaffold00107.34)	0.84	1.0	0.73	0.14	0.24	0.11	0.13	0.24	0.34	0.24	0.25	0.26	0.2	0.3	0.24	0.22	0.41	0.32	0.21	0.36	0.28	0.33
AMTR_s00108p00119790 (evm_27.TU.AmTr_v1.0_scaffold00108.33)	0.71	1.0	0.55	0.0	0.03	0.01	0.0	0.0	0.02	0.05	0.06	0.04	0.03	0.04	0.02	0.01	0.04	0.03	0.04	0.09	0.05	0.05
AMTR_s00131p00039190 (evm_27.TU.AmTr_v1.0_scaffold00131.22)	0.84	0.79	1.0	0.0	0.0	0.02	0.0	0.07	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.05	0.0
AMTR_s00147p00069920 (evm_27.TU.AmTr_v1.0_scaffold00147.31)	0.9	0.58	1.0	0.0	0.03	0.0	0.09	0.0	0.08	0.05	0.02	0.1	0.12	0.05	0.04	0.03	0.0	0.03	0.05	0.04	0.11	0.03
AMTR_s00169p00054520 (evm_27.TU.AmTr_v1.0_scaffold00169.33)	0.56	0.88	1.0	0.0	0.17	0.15	0.05	0.04	0.04	0.04	0.2	0.11	0.14	0.05	0.07	0.11	0.36	0.1	0.09	0.09	0.07	0.14
AMTR_s00170p00032930 (ASP1)	0.64	1.0	0.99	0.06	0.35	0.27	0.2	0.12	0.14	0.14	0.22	0.27	0.22	0.21	0.2	0.22	0.29	0.17	0.13	0.17	0.11	0.16
AMTR_s00197p00038210 (evm_27.TU.AmTr_v1.0_scaffold00197.17)	0.75	1.0	0.5	0.01	0.03	0.0	0.0	0.0	0.01	0.01	0.11	0.13	0.02	0.02	0.06	0.08	0.17	0.01	0.03	0.1	0.04	0.07
AMTR_s00498p00012510 (AIR3)	1.0	0.9	0.78	0.06	0.04	0.02	0.01	0.0	0.01	0.01	0.02	0.11	0.07	0.0	0.01	0.01	0.0	0.01	0.02	0.01	0.0	0.0
AMTR_s00910p00007910 (SBT5.4)	1.0	0.64	0.33	0.01	0.03	0.0	0.0	0.0	0.01	0.0	0.01	0.03	0.03	0.0	0.0	0.01	0.0	0.0	0.01	0.0	0.01	0.0
AMTR_s01624p00005070 (evm_27.TU.AmTr_v1.0_scaffold01624.1)	1.0	0.57	0.84	0.0	0.03	0.03	0.0	0.0	0.0	0.0	0.01	0.28	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s02394p00007650 (evm_27.TU.AmTr_v1.0_scaffold02394.1)	1.0	0.64	0.24	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.04	0.0	0.0	0.0	0.13	0.0	0.0	0.0	0.0	0.01
AMTR_s03992p00000870 (D3)	1.0	0.5	0.38	0.0	0.01	0.05	0.01	0.0	0.01	0.01	0.01	0.0	0.07	0.0	0.0	0.0	0.01	0.0	0.0	0.01	0.0	0.01

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)