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Heatmap: Cluster_43 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00024970 (evm_27.TU.AmTr_v1.0_scaffold00001.9)
 0.0 0.0 0.0 1.36 5.33 0.0 7.55 17.93 18.74 8.54 0.06 0.42 0.88 1.47 2.98 0.86 0.18 0.0 0.05 0.25 0.17 0.06
AMTR_s00001p00131590 (evm_27.TU.AmTr_v1.0_scaffold00001.106)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.06 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00002p00193680 (evm_27.TU.AmTr_v1.0_scaffold00002.174)
 0.0 0.0 0.0 0.0 0.38 0.0 0.32 1.91 4.14 5.78 1.94 0.0 2.17 0.53 0.77 0.44 0.52 0.38 0.0 0.98 0.0 0.94
AMTR_s00002p00238790 (evm_27.TU.AmTr_v1.0_scaffold00002.290)
 0.0 0.0 0.0 0.0 5.2 0.0 1.51 8.49 7.54 17.1 0.0 10.4 0.0 0.38 1.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 1.03 0.0 1.58 1.95 1.55 1.89 0.43 1.95 0.32 0.32 0.51 0.09 0.23 0.1 0.1 0.04 0.09 0.07
AMTR_s00007p00115770 (evm_27.TU.AmTr_v1.0_scaffold00007.71)
 0.0 0.0 0.0 0.0 0.4 0.0 0.52 0.71 1.58 1.31 0.52 1.01 0.0 0.28 0.1 0.74 0.28 0.14 0.0 0.04 0.12 0.04
AMTR_s00007p00264470 (evm_27.TU.AmTr_v1.0_scaffold00007.349)
 0.0 0.0 0.0 0.0 0.07 0.0 0.01 0.99 7.39 50.94 0.09 0.0 1.2 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 5.93
AMTR_s00007p00264500 (evm_27.TU.AmTr_v1.0_scaffold00007.350)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 7.43 45.57 0.0 1.12 0.9 0.14 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.32
AMTR_s00017p00235360 (evm_27.TU.AmTr_v1.0_scaffold00017.193)
 0.0 0.0 0.0 0.0 0.21 0.0 2.45 244.03 105.73 384.3 0.0 0.0 0.39 0.62 0.1 0.0 0.0 0.0 0.0 0.05 0.0 0.14
AMTR_s00017p00235530 (evm_27.TU.AmTr_v1.0_scaffold00017.194)
 0.0 0.0 0.0 0.0 0.03 0.0 0.03 0.93 0.56 2.84 0.0 0.0 0.1 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00017p00237550 (evm_27.TU.AmTr_v1.0_scaffold00017.201)
 0.0 1.48 0.0 0.0 0.28 7.42 3.14 22.33 8.88 39.21 3.45 7.4 0.55 0.65 0.59 0.5 0.54 4.44 6.43 0.48 1.16 2.59
AMTR_s00017p00237900 (evm_27.TU.AmTr_v1.0_scaffold00017.203)
 0.0 1.2 12.6 0.0 1.99 18.13 9.23 66.64 32.81 166.17 0.44 0.0 1.07 2.28 0.73 1.0 0.0 0.74 0.0 1.14 0.0 0.0
AMTR_s00019p00055210 (evm_27.TU.AmTr_v1.0_scaffold00019.32)
 8.24 0.0 0.0 0.0 0.1 0.0 0.0 3.36 1.87 37.01 0.0 0.0 0.01 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00019p00057300 (evm_27.TU.AmTr_v1.0_scaffold00019.34)
 0.1 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.14 1.18 0.0 0.0 0.02 0.0 0.01 0.0 0.04 0.0 0.0 0.0 0.0 0.01
AMTR_s00019p00130680 (evm_27.TU.AmTr_v1.0_scaffold00019.110)
 0.0 0.0 0.0 0.02 1.35 0.0 0.12 22.72 26.46 105.25 0.0 0.13 0.24 0.06 0.05 0.0 0.03 0.0 0.0 0.0 0.0 0.08
AMTR_s00021p00134770 (evm_27.TU.AmTr_v1.0_scaffold00021.88)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
4.04 0.04 0.02 0.0 0.05 0.0 1.3 0.0 3.73 6.35 0.28 0.14 0.49 0.32 0.97 0.48 0.03 0.0 0.0 0.0 0.0 0.66
0.0 0.0 0.0 0.04 0.06 0.0 0.43 1.13 0.92 1.44 0.12 0.0 0.03 0.11 0.02 0.0 0.09 0.0 0.0 0.3 1.53 0.08
AMTR_s00023p00156560 (evm_27.TU.AmTr_v1.0_scaffold00023.94)
 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00023p00241850 (evm_27.TU.AmTr_v1.0_scaffold00023.208)
 0.0 0.0 0.0 0.0 0.2 0.0 0.0 0.0 0.18 0.67 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.12 0.22 0.03 0.1 0.01 0.0 0.01 0.0 0.02 0.0 0.0 0.0 0.0 0.0
AMTR_s00025p00139660 (evm_27.TU.AmTr_v1.0_scaffold00025.146)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00027p00248590 (evm_27.TU.AmTr_v1.0_scaffold00027.164)
 0.0 0.0 0.0 0.0 0.22 0.0 0.1 0.0 0.0 0.66 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00028p00057220 (evm_27.TU.AmTr_v1.0_scaffold00028.10)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00028p00106170 (evm_27.TU.AmTr_v1.0_scaffold00028.32)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.16 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00028p00208270 (evm_27.TU.AmTr_v1.0_scaffold00028.98)
 6.34 4.09 0.09 5.22 2.49 0.0 19.58 10.5 35.92 50.24 21.27 18.9 25.69 11.84 4.88 0.0 7.76 4.07 3.02 1.92 0.0 11.13
2.66 2.05 0.0 4.44 1.21 0.0 0.04 0.59 3.68 7.09 0.14 0.48 3.0 0.08 0.81 0.19 0.07 0.08 0.85 0.42 0.75 0.46
16.42 11.7 9.93 0.06 1.03 0.0 0.62 10.21 12.85 30.24 1.3 0.93 14.6 0.72 0.3 0.32 0.59 2.45 4.06 1.24 1.83 2.52
159.62 115.58 111.04 72.83 1.0 18.57 81.42 106.56 266.09 439.12 18.07 24.97 14.14 107.61 7.19 0.97 1.36 2.76 5.11 87.58 0.5 6.21
AMTR_s00040p00029850 (evm_27.TU.AmTr_v1.0_scaffold00040.11)
 63.92 32.33 28.33 24.04 21.17 0.71 2.56 16.67 16.43 43.17 0.14 2.61 0.4 1.15 3.07 0.0 0.0 0.0 0.0 0.02 0.0 0.01
AMTR_s00041p00210230 (evm_27.TU.AmTr_v1.0_scaffold00041.210)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00046p00215180 (evm_27.TU.AmTr_v1.0_scaffold00046.142)
 0.0 0.05 0.0 0.0 0.92 0.0 0.8 6.4 2.03 1.63 0.0 0.82 0.04 1.34 0.58 0.0 0.0 0.0 0.0 0.04 0.0 0.0
AMTR_s00050p00224240 (evm_27.TU.AmTr_v1.0_scaffold00050.90)
 0.7 2.18 0.9 0.0 0.46 0.0 0.12 104.88 47.35 43.01 0.0 0.0 0.39 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00053p00171400 (evm_27.TU.AmTr_v1.0_scaffold00053.118)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00054p00083290 (evm_27.TU.AmTr_v1.0_scaffold00054.27)
 1.49 5.21 6.38 0.64 3.31 0.0 15.46 24.0 29.52 32.1 11.28 8.96 10.25 9.69 6.22 3.41 5.74 12.33 11.41 14.26 9.68 8.84
AMTR_s00059p00125600 (evm_27.TU.AmTr_v1.0_scaffold00059.100)
 0.0 0.0 0.0 0.0 10.37 0.0 5.72 9.76 11.34 7.53 0.0 0.99 0.0 0.74 3.93 0.0 0.0 0.0 0.0 0.0 0.0 0.12
AMTR_s00060p00189310 (evm_27.TU.AmTr_v1.0_scaffold00060.127)
 0.0 0.0 0.0 0.0 1.1 0.0 5.42 0.54 12.21 13.25 3.6 0.0 2.62 1.89 1.17 0.0 0.94 3.61 0.0 2.18 0.0 2.34
AMTR_s00065p00147620 (evm_27.TU.AmTr_v1.0_scaffold00065.104)
 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.82 0.9 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00069p00078290 (evm_27.TU.AmTr_v1.0_scaffold00069.48)
 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00088p00127510 (evm_27.TU.AmTr_v1.0_scaffold00088.91)
 0.0 0.0 0.0 0.16 3.79 0.0 10.55 17.75 4.68 5.84 0.0 0.0 0.62 4.16 1.11 0.0 0.65 0.77 0.35 1.77 0.69 1.59
AMTR_s00089p00059440 (evm_27.TU.AmTr_v1.0_scaffold00089.19)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.04 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00104p00072030 (evm_27.TU.AmTr_v1.0_scaffold00104.23)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00104p00137510 (evm_27.TU.AmTr_v1.0_scaffold00104.67)
 0.0 0.0 0.0 0.0 1.1 0.0 0.21 0.0 1.5 2.61 0.0 0.0 0.0 0.35 0.31 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00110p00027340 (evm_27.TU.AmTr_v1.0_scaffold00110.7)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00128p00058650 (evm_27.TU.AmTr_v1.0_scaffold00128.12)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00134p00119180 (evm_27.TU.AmTr_v1.0_scaffold00134.38)
 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.05 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00134p00124080 (evm_27.TU.AmTr_v1.0_scaffold00134.40)
 9.65 0.0 0.0 0.0 0.82 0.0 0.09 18.1 12.16 17.58 0.09 0.0 0.17 0.77 0.67 0.0 0.0 0.0 0.11 0.0 0.0 0.0
AMTR_s00149p00071830 (evm_27.TU.AmTr_v1.0_scaffold00149.51)
 0.0 0.0 0.0 0.12 0.69 0.0 0.64 0.97 0.89 0.98 0.0 0.0 0.0 0.03 0.08 0.0 0.0 0.0 0.0 0.0 0.0 0.07
AMTR_s00171p00044290 (evm_27.TU.AmTr_v1.0_scaffold00171.23)
 0.0 0.0 0.0 0.0 1.38 0.0 3.11 10.54 15.14 42.27 0.11 0.9 0.43 0.64 0.31 0.0 0.89 0.11 0.27 0.24 0.4 2.71
AMTR_s00346p00012120 (evm_27.TU.AmTr_v1.0_scaffold00346.1)
 0.0 0.0 0.0 0.0 0.0 0.0 0.24 0.0 0.04 0.24 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00408p00014240 (evm_27.TU.AmTr_v1.0_scaffold00408.1)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)