Heatmap: Cluster_15 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00244060 (evm_27.TU.AmTr_v1.0_scaffold00001.286)
- - - - 0.1 - - - -3.36 - 0.79 - 4.07 0.26 -0.67 - - - - -1.15 - -
-0.17 -0.54 -0.65 -1.28 -1.14 -6.08 -5.64 -10.33 -5.57 -5.34 1.9 1.78 1.17 1.62 2.31 -0.55 -2.74 -1.91 -2.62 -4.81 -5.37 -3.49
AMTR_s00002p00176350 (evm_27.TU.AmTr_v1.0_scaffold00002.149)
- - - - 2.22 - - - - - - - 0.55 - 3.48 - - - - 1.36 - 1.1
-1.72 - - 0.43 -1.18 - -1.98 - -2.41 -2.37 1.73 0.29 0.57 0.21 0.87 -2.28 0.01 -1.32 0.86 2.21 -0.74 0.69
AMTR_s00003p00159820 (evm_27.TU.AmTr_v1.0_scaffold00003.133)
- - - - - - - - - - - - - - - - - - - - - -
AMTR_s00003p00248500 (evm_27.TU.AmTr_v1.0_scaffold00003.289)
- - - - 3.26 - - - - - - - - - - - - - - - - 3.63
AMTR_s00003p00251320 (evm_27.TU.AmTr_v1.0_scaffold00003.297)
- - - - - - - - -0.8 - - - -0.91 - 1.75 3.42 2.01 - - 0.81 - 0.04
- -0.36 - -2.53 -0.16 - -3.29 -4.5 -2.35 -2.72 0.48 -1.41 1.6 1.83 1.29 - 2.95 - -2.25 -1.99 -0.58 -
AMTR_s00003p00265570 (evm_27.TU.AmTr_v1.0_scaffold00003.371)
- - - - 2.67 - 0.01 - 0.1 - - - 2.19 1.9 - - - - - 0.65 - 1.89
AMTR_s00006p00247700 (evm_27.TU.AmTr_v1.0_scaffold00006.135)
-1.14 0.51 0.86 -0.34 -0.61 -3.4 -2.24 -3.66 -1.03 -1.5 1.35 0.72 0.1 0.4 1.77 0.34 -0.87 0.27 -0.4 -1.38 -0.77 -0.18
- - -3.91 - -2.29 - -5.85 - -5.35 -7.5 1.25 0.39 1.22 2.45 3.1 - 0.3 -6.93 -6.91 -1.57 - -
AMTR_s00007p00228370 (evm_27.TU.AmTr_v1.0_scaffold00007.229)
- - - -6.74 -2.04 - -5.03 - -5.94 -6.82 1.43 0.18 1.76 2.63 2.85 -6.0 -0.29 - -6.7 -1.92 - -
AMTR_s00007p00245730 (evm_27.TU.AmTr_v1.0_scaffold00007.265)
- - 2.97 - - - 1.74 - 3.43 - - - - - - - - - - - - -
AMTR_s00008p00147830 (evm_27.TU.AmTr_v1.0_scaffold00008.72)
- - - - - - - - - - - - - - - - - - - 4.46 - -
AMTR_s00011p00070060 (evm_27.TU.AmTr_v1.0_scaffold00011.11)
- - - - - - - - - - - - - - - - - - - - - -
- -1.84 1.84 - -4.38 - - - -5.05 -4.3 0.24 0.02 3.44 1.83 - - - - -0.15 - - -1.09
AMTR_s00013p00159980 (evm_27.TU.AmTr_v1.0_scaffold00013.84)
- - - - - - 1.4 - 1.74 3.38 - - - - 2.49 - - - - - - -
AMTR_s00013p00212530 (evm_27.TU.AmTr_v1.0_scaffold00013.148)
- - - - 0.34 - - - - -2.11 - - 2.7 -1.4 -2.1 - 1.06 - 2.03 - 2.85 -
AMTR_s00018p00126810 (evm_27.TU.AmTr_v1.0_scaffold00018.59)
- - - - 0.9 - - - - - - - - - - - - - - 4.33 - -
AMTR_s00019p00151500 (evm_27.TU.AmTr_v1.0_scaffold00019.139)
- -0.7 -1.9 - -0.73 -0.05 -6.88 -2.88 -6.82 -7.69 1.07 -2.95 3.13 2.63 -0.93 -0.19 -2.55 - -3.53 -1.68 -4.3 -2.43
AMTR_s00026p00122450 (evm_27.TU.AmTr_v1.0_scaffold00026.55)
- - - - -0.6 - - - - - - 3.57 - - -0.55 3.0 - - - - - -0.3
AMTR_s00028p00088140 (evm_27.TU.AmTr_v1.0_scaffold00028.23)
- - - - - - - - - - - - - - - - - - - - - -
AMTR_s00028p00240600 (evm_27.TU.AmTr_v1.0_scaffold00028.130)
- - - - -1.9 - - - - - 1.21 - 2.57 -1.95 - 3.43 0.86 - - -0.63 - -
AMTR_s00028p00240610 (evm_27.TU.AmTr_v1.0_scaffold00028.131)
- - - 0.64 0.94 - - - - - 0.38 - 0.33 - -2.28 1.91 1.98 - -0.2 0.9 2.39 -3.62
0.72 0.48 -2.54 -6.04 -7.07 1.73 -1.9 -4.3 -2.06 -1.95 -0.33 -0.93 2.51 -1.12 -0.62 1.16 0.05 -3.56 -3.73 1.15 -0.82 -1.88
- - - - 1.36 - - - - - - - 2.18 0.19 -1.53 - -0.86 - 2.09 2.99 - -0.68
AMTR_s00033p00243920 (evm_27.TU.AmTr_v1.0_scaffold00033.268)
- 0.62 0.42 - -0.81 - - - - - -0.13 1.51 2.23 -4.55 2.26 0.46 1.28 - - -4.17 - 0.52
- 1.14 -0.04 - -0.05 - -9.47 - -8.98 -8.64 1.57 -0.57 2.3 -3.6 2.33 -6.54 1.35 -6.57 -5.05 -3.72 -4.14 0.52
AMTR_s00036p00143280 (evm_27.TU.AmTr_v1.0_scaffold00036.65)
- - - - 4.46 - - - - - - - - - - - - - - - - -
- -2.74 - - -0.43 - -3.77 - -3.31 -2.9 1.57 -0.7 1.5 -0.43 -0.74 2.46 1.22 -1.78 -1.03 -1.47 1.86 -1.2
AMTR_s00037p00206160 (evm_27.TU.AmTr_v1.0_scaffold00037.105)
- - - - 4.1 - - - - - - - - - 2.26 - - - - - - -
AMTR_s00037p00217830 (evm_27.TU.AmTr_v1.0_scaffold00037.120)
- - - - - - - - - - - - - - - - - - - - - -
AMTR_s00038p00205010 (evm_27.TU.AmTr_v1.0_scaffold00038.156)
- - - - 3.07 - - - - - - - - - 3.46 - - - - 1.38 - -
AMTR_s00041p00104000 (evm_27.TU.AmTr_v1.0_scaffold00041.70)
- - - - - - - - - - - - - - - - - - - - - -
AMTR_s00042p00208670 (evm_27.TU.AmTr_v1.0_scaffold00042.57)
- - - - 0.23 - 0.98 - 1.29 1.88 - - 1.0 0.63 1.72 - - - - 1.8 - 1.26
AMTR_s00042p00218920 (evm_27.TU.AmTr_v1.0_scaffold00042.68)
- - - - 4.46 - - - - - - - - - - - - - - - - -
- - - - 4.23 - - - - 1.72 - - - - - - - - - - - -
AMTR_s00049p00212540 (evm_27.TU.AmTr_v1.0_scaffold00049.243)
- - - - - - - - 3.34 - - - 3.57 - - - - - - - - -
AMTR_s00056p00221700 (evm_27.TU.AmTr_v1.0_scaffold00056.221)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00058p00163240 (evm_27.TU.AmTr_v1.0_scaffold00058.145)
- - - -0.96 3.01 - - - - -1.51 - - 1.21 -0.2 2.14 2.32 - - - -1.05 - -
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00066p00120870 (evm_27.TU.AmTr_v1.0_scaffold00066.114)
- - - - - - - - - 2.76 - - - - - - - - - - - 3.93
- - -0.67 - -3.71 - - - - - -1.55 2.16 2.96 0.14 1.6 1.17 -4.91 -4.12 -0.98 -5.78 -2.27 0.57
AMTR_s00067p00026370 (evm_27.TU.AmTr_v1.0_scaffold00067.10)
- - - - 4.46 - - - - - - - - - - - - - - - - -
0.94 0.2 0.45 -4.38 -0.35 - -6.43 -8.87 -4.92 -5.46 0.99 1.34 -0.64 1.54 2.38 -2.72 -1.94 -0.5 0.28 -2.02 -1.42 -1.19
-2.8 -1.4 -0.87 - 0.36 - - - - - 1.74 1.14 -2.26 1.98 3.02 - -3.16 -2.3 -0.67 -2.49 -3.45 -0.66
AMTR_s00073p00155730 (evm_27.TU.AmTr_v1.0_scaffold00073.42)
- - - - - - - - 4.46 - - - - - - - - - - - - -
AMTR_s00078p00184130 (evm_27.TU.AmTr_v1.0_scaffold00078.184)
- - - - - - - - - - -4.71 4.0 0.59 - -10.89 -3.96 - - - - - 2.14
AMTR_s00079p00122170 (evm_27.TU.AmTr_v1.0_scaffold00079.47)
- - - - 2.65 - - - - - - - 3.53 2.06 - - - - - - - -
- - - - 3.79 - - - -3.06 - 1.87 - 1.04 -1.51 -0.93 - - - - -1.97 - 0.26
AMTR_s00090p00093060 (evm_27.TU.AmTr_v1.0_scaffold00090.37)
- - - - 0.26 - - - -2.59 - - - 4.36 -2.96 - - - - - - - -
AMTR_s00092p00123070 (evm_27.TU.AmTr_v1.0_scaffold00092.87)
- - - - -5.07 - - - - -6.12 -0.17 3.03 0.11 -0.12 0.3 - -0.58 -1.91 1.97 -4.46 - 2.25
-0.3 -0.97 -3.03 -2.57 -1.03 - -7.42 - -10.31 -10.49 0.95 1.09 0.02 1.35 1.75 0.87 1.3 0.89 -1.33 -0.38 0.49 -2.48
AMTR_s00096p00136360 (evm_27.TU.AmTr_v1.0_scaffold00096.87)
- - - - 4.15 - - - - - - - 2.1 - - - - - - - - -
AMTR_s00097p00112990 (evm_27.TU.AmTr_v1.0_scaffold00097.24)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00100p00158140 (evm_27.TU.AmTr_v1.0_scaffold00100.64)
- - - - 3.49 - - - - - - - 3.12 1.02 - - - - - - - -
AMTR_s00105p00071450 (evm_27.TU.AmTr_v1.0_scaffold00105.32)
- - - - - - 3.03 - 3.79 - - - - - - - - - - - - -
-1.4 -0.94 -1.27 0.42 -2.59 -4.8 -6.19 -8.04 -7.17 -6.61 1.91 1.03 1.58 0.41 2.67 -0.63 -0.78 -2.5 -1.63 -1.78 -4.57 -0.87
AMTR_s00114p00107480 (evm_27.TU.AmTr_v1.0_scaffold00114.43)
- - - - 4.46 - - - - - - - - - - - - - - - - -
AMTR_s00129p00101770 (evm_27.TU.AmTr_v1.0_scaffold00129.78)
- - - - - - - - - - - - - - 4.46 - - - - - - -
- - 3.8 - 2.32 - - - - - - - - - 1.61 - - - - - - -
AMTR_s00130p00089050 (evm_27.TU.AmTr_v1.0_scaffold00130.40)
- - - - -0.92 - 0.97 - 1.41 -0.53 - - 2.67 -0.58 1.31 - - - - 0.16 - 2.47
AMTR_s00134p00075640 (evm_27.TU.AmTr_v1.0_scaffold00134.21)
- - - - 3.24 - - - - - - - - - 2.97 - - - - 2.24 - -
AMTR_s00144p00041160 (evm_27.TU.AmTr_v1.0_scaffold00144.15)
- - - - - - - - - - - - - - - - - - - - - -
- -0.07 -1.51 - -0.88 - -8.39 - -6.27 -6.76 1.49 2.41 1.53 -3.9 1.87 1.73 0.42 -3.91 - -4.49 - -0.66
- 0.6 0.26 -3.54 -0.98 - -7.57 - -7.23 -7.8 1.93 1.14 1.48 -3.98 2.03 0.4 1.8 - - -4.0 - -0.18
AMTR_s00190p00036840 (evm_27.TU.AmTr_v1.0_scaffold00190.14)
- - - - 2.88 - -0.23 - 0.24 0.28 - - -0.34 0.01 2.87 - - - - 0.64 - -0.48
AMTR_s00197p00032170 (evm_27.TU.AmTr_v1.0_scaffold00197.12)
-1.35 - -0.37 -0.5 -1.52 0.71 -0.62 -1.77 -0.92 -0.58 -0.03 0.73 1.76 1.5 -0.36 0.76 -1.04 -0.64 -0.25 -0.81 -1.26 0.79
AMTR_s00203p00033040 (evm_27.TU.AmTr_v1.0_scaffold00203.12)
- - - - 4.11 - - - - 1.39 - - - - - - - - - - - 1.07
AMTR_s00203p00033270 (evm_27.TU.AmTr_v1.0_scaffold00203.13)
- - - - - - - - 0.02 2.28 - - 1.25 - - - - - - - - 3.78
AMTR_s00239p00012930 (evm_27.TU.AmTr_v1.0_scaffold00239.2)
- - - - -0.33 - - - - - - - 2.4 - - 2.62 1.2 - 2.02 - - 1.77
- - - - -0.61 - -0.55 - - - 2.29 3.98 - - - - - - - - - -
AMTR_s00441p00013020 (evm_27.TU.AmTr_v1.0_scaffold00441.1)
- - - - - - - - 3.51 3.41 - - - - - - - - - - - -
AMTR_s01213p00010640 (evm_27.TU.AmTr_v1.0_scaffold01213.1)
- - - -1.12 - - 0.36 - 0.94 -0.58 0.07 - 3.29 1.95 -2.3 - - - - -2.14 - 1.33
- - - - 0.26 - - - - - 2.29 - 2.5 -1.47 - - - - - 2.17 - 2.44
- -1.11 -0.01 -0.98 -0.6 - -9.21 - - -7.99 0.54 -0.25 1.93 -4.17 3.0 - 1.47 -5.84 -6.82 -4.34 -2.68 1.12
AMTR_s02407p00009140 (evm_27.TU.AmTr_v1.0_scaffold02407.1)
- - - - - - - - - - - - 2.86 3.88 - - - - - - - -
AMTR_s04023p00007260 (evm_27.TU.AmTr_v1.0_scaffold04023.1)
- - - - - - - - - - 4.11 - 1.75 - 0.44 - - - - - - -
- 0.94 - - -0.39 - - - -5.7 -7.64 1.44 2.99 -1.48 -3.81 1.85 2.1 - -3.28 -4.26 - - -2.66

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.