Heatmap: Cluster_13 (HCCA)

View as: (view raw or zlog-transformed)

View using InCHLib : here ( Experimental feature, still under development)

(Values are normalized against highest expression of the row)

Gene	Egg apparatus cell (small)	Egg apparatus cell (medium)	Egg apparatus cell (large)	Ovary	Uninuclear microspore	Generative cell	Pollen	Sperm	Pollen tube (bicellular)	Pollen tube (tricellular)	Flower (bud, female)	Flower (bud, male)	Flower (female)	Flower (male)	Flower (tepals)	Fruit (female)	Apical meristem	Shoot (female)	Shoot (male)	Leaf (male)	Leaves	Root (male)
AMTR_s00002p00267570 (UNE12)	0.17	0.1	0.15	0.32	0.39	0.0	0.0	0.0	0.0	0.01	0.58	1.0	0.33	0.07	0.18	0.24	0.26	0.06	0.1	0.03	0.01	0.7
AMTR_s00003p00011850 (evm_27.TU.AmTr_v1.0_scaffold00003.3)	0.0	0.0	0.0	0.0	0.28	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.44	0.0	0.79	0.0
AMTR_s00003p00249980 (CRR22)	0.0	0.0	0.0	0.0	0.26	0.0	0.0	0.0	0.0	0.0	0.34	0.8	0.04	0.0	0.18	0.0	0.26	0.0	1.0	0.11	0.84	0.25
AMTR_s00003p00265820 (evm_27.TU.AmTr_v1.0_scaffold00003.373)	0.0	0.22	0.0	0.0	0.26	0.0	0.0	0.0	0.0	0.02	0.3	1.0	0.03	0.0	0.03	0.0	0.15	0.0	0.0	0.0	0.0	0.72
AMTR_s00006p00261160 (evm_27.TU.AmTr_v1.0_scaffold00006.228)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.09	0.04	0.0	1.0	0.06	0.03	0.06	0.34	0.0	0.0	0.0	0.04	0.0	0.48
AMTR_s00006p00267350 (evm_27.TU.AmTr_v1.0_scaffold00006.300)	0.0	0.0	0.0	0.0	0.05	0.0	0.08	0.0	0.19	0.27	0.03	1.0	0.1	0.0	0.01	0.0	0.13	0.0	0.0	0.02	0.0	0.35
AMTR_s00007p00049440 (LGT1)	0.0	0.0	0.0	0.0	0.32	0.01	0.2	0.21	0.12	0.17	0.34	1.0	0.24	0.19	0.2	0.09	0.27	0.1	0.1	0.11	0.11	0.13
AMTR_s00007p00049660 (GAUT3)	0.0	0.0	0.0	0.02	0.26	0.0	0.15	0.06	0.13	0.16	0.4	1.0	0.15	0.16	0.17	0.15	0.35	0.08	0.06	0.11	0.16	0.12
AMTR_s00007p00260250 (evm_27.TU.AmTr_v1.0_scaffold00007.324)	0.0	0.0	0.0	0.0	0.05	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.02	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.27
AMTR_s00007p00262640 (evm_27.TU.AmTr_v1.0_scaffold00007.336)	0.0	0.0	0.0	0.01	0.07	0.0	0.0	0.0	0.0	0.0	0.09	1.0	0.2	0.06	0.02	0.11	0.08	0.05	0.05	0.05	0.09	0.51
AMTR_s00008p00261810 (GRF12)	0.0	0.0	0.0	0.0	0.1	0.0	0.01	0.0	0.0	0.01	0.03	1.0	0.02	0.01	0.02	0.08	0.2	0.19	0.19	0.19	0.09	0.07
AMTR_s00016p00223460 (evm_27.TU.AmTr_v1.0_scaffold00016.204)	0.0	0.0	0.0	0.0	0.02	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.6
AMTR_s00025p00044700 (evm_27.TU.AmTr_v1.0_scaffold00025.23)	0.0	0.0	0.0	0.05	0.01	0.0	0.0	0.0	0.0	0.0	0.74	1.0	0.11	0.0	0.0	0.0	0.8	0.03	0.0	0.0	0.0	0.04
AMTR_s00025p00190370 (evm_27.TU.AmTr_v1.0_scaffold00025.234)	0.0	0.0	0.15	0.0	0.59	0.0	0.0	0.0	0.0	0.0	0.31	1.0	0.07	0.03	0.06	0.01	0.07	0.04	0.02	0.06	0.01	0.29
AMTR_s00027p00216140 (evm_27.TU.AmTr_v1.0_scaffold00027.78)	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.12	0.0	0.0	0.0	0.11	0.0	0.41	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00031p00017860 (TGA9)	0.0	0.0	0.0	0.03	0.13	0.0	0.0	0.0	0.0	0.0	0.21	1.0	0.05	0.04	0.04	0.05	0.0	0.0	0.0	0.0	0.0	0.5
AMTR_s00031p00109840 (evm_27.TU.AmTr_v1.0_scaffold00031.47)	0.0	0.0	0.0	0.0	0.13	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.44	0.0	0.0	0.0
AMTR_s00037p00038160 (evm_27.TU.AmTr_v1.0_scaffold00037.12)	0.0	0.0	0.0	0.0	0.11	0.0	0.03	0.0	0.04	0.07	0.15	1.0	0.0	0.03	0.0	0.0	0.0	0.0	0.1	0.09	0.0	0.12
AMTR_s00038p00074690 (PIN1)	0.0	0.0	0.0	0.0	0.04	0.0	0.04	0.0	0.0	0.04	0.0	1.0	0.0	0.11	0.02	0.0	0.0	0.0	0.13	0.03	0.0	0.38
AMTR_s00038p00095950 (BRS1)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.43	1.0	0.03	0.0	0.0	0.0	0.0	0.0	0.0	0.04	0.22	0.96
AMTR_s00044p00127630 (evm_27.TU.AmTr_v1.0_scaffold00044.111)	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.03	0.0	0.35	0.07	0.34	0.44	0.0	0.13	0.0	0.0	0.0	0.14	0.03
AMTR_s00044p00136030 (evm_27.TU.AmTr_v1.0_scaffold00044.126)	0.0	0.0	0.0	0.0	0.01	0.0	0.0	0.0	0.0	0.0	0.18	1.0	0.03	0.0	0.04	0.0	0.02	0.01	0.0	0.0	0.0	0.4
AMTR_s00044p00180330 (ETO3)	0.0	0.0	0.0	0.0	0.67	0.0	0.0	0.0	0.11	0.04	0.58	1.0	0.15	0.15	0.12	0.0	0.48	0.0	0.0	0.0	0.0	0.21
AMTR_s00049p00152020 (CYP716A1)	0.0	0.0	0.0	0.03	0.15	0.0	0.0	0.0	0.0	0.0	0.3	0.68	0.04	0.02	0.32	0.14	0.07	0.03	0.03	0.02	0.1	1.0
AMTR_s00049p00173370 (evm_27.TU.AmTr_v1.0_scaffold00049.161)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.04	1.0	0.24	0.08	0.0	0.13	0.02	0.21	0.12	0.02	0.02	0.47
AMTR_s00050p00034460 (FUC1)	0.0	0.0	0.0	0.0	0.03	0.0	0.05	0.0	0.0	0.03	0.1	1.0	0.07	0.01	0.03	0.0	0.04	0.07	0.03	0.05	0.0	0.73
AMTR_s00056p00124260 (evm_27.TU.AmTr_v1.0_scaffold00056.92)	0.0	0.0	0.0	0.0	0.05	0.0	0.0	0.0	0.01	0.02	0.0	1.0	0.03	0.29	0.01	0.0	0.0	0.0	0.0	0.0	0.0	0.38
AMTR_s00057p00093030 (evm_27.TU.AmTr_v1.0_scaffold00057.70)	0.0	0.0	0.0	0.08	0.38	0.0	0.01	0.0	0.01	0.01	0.21	1.0	0.05	0.14	0.24	0.02	0.24	0.16	0.04	0.06	0.09	0.31
AMTR_s00059p00177640 (evm_27.TU.AmTr_v1.0_scaffold00059.188)	0.0	0.0	0.0	0.0	0.02	0.0	0.0	0.0	0.0	0.0	0.46	1.0	0.11	0.0	0.04	0.0	0.13	0.0	0.11	0.02	0.0	0.43
AMTR_s00062p00092250 (HSP18.2)	0.0	0.0	0.0	0.0	0.12	0.0	0.0	0.0	0.0	0.0	0.07	1.0	0.05	0.0	0.02	0.0	0.12	0.22	0.1	0.0	0.0	0.31
AMTR_s00064p00177350 (evm_27.TU.AmTr_v1.0_scaffold00064.79)	0.0	0.0	0.0	0.0	1.0	0.0	0.03	0.0	0.01	0.02	0.03	0.34	0.03	0.02	0.41	0.0	0.0	0.0	0.0	0.0	0.0	0.17
AMTR_s00080p00031010 (evm_27.TU.AmTr_v1.0_scaffold00080.6)	0.42	0.19	0.0	0.06	0.01	0.0	0.0	0.0	0.0	0.0	0.15	1.0	0.17	0.0	0.01	0.01	0.16	0.02	0.0	0.0	0.01	0.56
AMTR_s00085p00167450 (evm_27.TU.AmTr_v1.0_scaffold00085.102)	0.0	0.0	0.0	0.0	0.04	0.0	0.0	0.0	0.0	0.0	0.11	1.0	0.03	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.92
AMTR_s00085p00167560 (evm_27.TU.AmTr_v1.0_scaffold00085.104)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0
AMTR_s00086p00086980 (AO1)	0.0	0.0	0.0	0.0	0.05	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.01	0.02	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.73
AMTR_s00086p00087080 (AAO3)	0.0	0.0	0.0	0.0	0.07	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.01	0.0	0.0	0.0	0.06	0.0	0.0	0.0	0.0	0.99
AMTR_s00086p00087150 (AO1)	0.0	0.0	0.0	0.0	0.06	0.0	0.01	0.0	0.0	0.0	0.0	1.0	0.02	0.01	0.01	0.0	0.03	0.0	0.0	0.0	0.0	0.38
AMTR_s00097p00146060 (PHT2)	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.4
AMTR_s00121p00069000 (evm_27.TU.AmTr_v1.0_scaffold00121.12)	0.0	0.0	0.0	0.0	0.4	0.0	0.0	0.0	0.04	0.11	0.15	1.0	0.12	0.17	0.41	0.0	0.18	0.0	0.11	0.18	0.2	0.26
AMTR_s00129p00030530 (evm_27.TU.AmTr_v1.0_scaffold00129.10)	0.0	0.0	0.0	0.0	1.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.66	0.0	0.0	0.0	0.0	0.0	0.0	0.92	0.0	0.34
AMTR_s00165p00045370 (evm_27.TU.AmTr_v1.0_scaffold00165.25)	0.0	0.0	0.0	0.0	0.05	0.0	0.04	0.0	0.08	0.04	0.0	1.0	0.12	0.03	0.08	0.0	0.25	0.0	0.0	0.06	0.0	0.07
AMTR_s00199p00021880 (evm_27.TU.AmTr_v1.0_scaffold00199.6)	0.0	0.0	0.0	0.0	0.05	0.0	0.0	0.0	0.0	0.0	0.16	1.0	0.04	0.0	0.02	0.03	0.24	0.19	0.19	0.03	0.05	0.41
AMTR_s00215p00029540 (RLP27)	0.0	0.0	0.0	0.09	0.53	0.0	0.0	0.0	0.0	0.0	0.07	1.0	0.08	0.0	0.0	0.0	0.06	0.0	0.0	0.02	0.0	0.02
AMTR_s00349p00015060 (evm_27.TU.AmTr_v1.0_scaffold00349.3)	0.0	0.0	0.0	0.0	0.02	0.0	0.0	0.0	0.0	0.0	0.08	1.0	0.0	0.0	0.01	0.0	0.0	0.0	0.0	0.0	0.0	0.34
AMTR_s05303p00003300 (evm_27.TU.AmTr_v1.0_scaffold05303.1)	0.0	0.02	0.0	0.0	0.05	0.0	0.0	0.0	0.0	0.0	0.0	0.88	0.03	0.0	0.0	0.0	0.0	0.0	0.0	0.0	0.0	1.0

Details

Expression values normalized per gene (using the maximum value, Green cells indicate low expression and red high. (Dark gray cells indicate missing values)