Heatmap: Cluster_398 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g111460.3.1 (Solyc01g111460.3)
0.48 0.64 -0.13 -0.35 -0.34 -0.11 1.81 -0.04 0.39 0.33 0.39 -0.35 0.64 -0.01 0.52 0.29 0.05 -6.46 -4.66 -0.58 -0.21 -0.26 -0.54 -0.32 -0.54 0.57 -0.49 -0.29 -0.4 -0.13 -0.11 -0.17 -3.42 0.1
Solyc09g056135.1.1 (Solyc09g056135.1)
-0.46 2.41 0.0 1.05 -3.8 -0.67 2.69 0.31 0.26 1.46 0.69 -0.73 -1.04 -1.14 -1.46 -1.66 -2.03 - -7.62 -1.74 -0.45 -0.76 -0.62 -0.86 -1.25 -0.58 -1.5 -1.49 -1.67 -1.08 -0.53 -0.54 0.11 -0.8

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.