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Heatmap: Cluster_48 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00073530 (evm_27.TU.AmTr_v1.0_scaffold00001.51)
 0.0 1.18 0.0 61.72 4.66 0.0 0.0 0.11 0.0 0.0 1.52 0.0 0.94 0.69 37.48 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00001p00255730 (evm_27.TU.AmTr_v1.0_scaffold00001.338)
 0.0 0.36 0.0 42.35 1.29 0.0 0.45 4.15 1.17 0.46 3.35 4.64 1.04 1.17 0.75 0.0 2.11 0.0 1.94 1.6 10.94 0.98
AMTR_s00001p00257680 (evm_27.TU.AmTr_v1.0_scaffold00001.351)
 43.17 28.56 25.76 243.97 31.8 1.35 3.46 0.18 7.33 6.7 39.56 53.33 43.39 60.39 108.6 32.54 24.75 39.85 44.49 75.34 37.81 49.44
AMTR_s00003p00068040 (evm_27.TU.AmTr_v1.0_scaffold00003.36)
 0.0 0.0 0.0 18.75 0.26 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.09 0.0 0.0 0.0 0.0 0.89 0.0 0.04
AMTR_s00006p00254970 (evm_27.TU.AmTr_v1.0_scaffold00006.181)
 0.0 0.0 0.0 0.91 0.31 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.03 0.0 0.58 0.0 0.0 0.0 0.0 0.0 0.0 0.61
AMTR_s00007p00105810 (evm_27.TU.AmTr_v1.0_scaffold00007.63)
 1.93 6.25 3.69 26.42 8.87 0.0 0.29 3.73 1.21 0.91 10.11 2.86 3.62 2.75 2.47 2.41 2.63 4.38 2.51 2.66 10.66 2.11
AMTR_s00007p00238990 (evm_27.TU.AmTr_v1.0_scaffold00007.250)
 0.3 0.0 0.0 21.17 0.43 0.0 0.0 0.0 0.0 0.0 0.87 0.0 1.15 0.07 0.39 0.0 0.0 0.0 0.0 0.3 0.0 0.72
AMTR_s00009p00264360 (evm_27.TU.AmTr_v1.0_scaffold00009.367)
 0.0 0.0 4.77 15.83 3.6 0.17 0.02 0.04 0.11 0.06 0.27 0.46 0.24 0.25 0.84 0.1 0.08 0.14 0.06 0.18 1.58 0.15
AMTR_s00009p00264540 (evm_27.TU.AmTr_v1.0_scaffold00009.374)
 7.92 1.44 0.0 36.81 11.0 0.0 1.05 3.72 1.56 1.3 13.07 7.06 7.67 6.61 10.02 5.66 14.68 8.82 7.54 6.84 5.1 6.87
AMTR_s00010p00252460 (evm_27.TU.AmTr_v1.0_scaffold00010.366)
 0.0 0.0 0.0 2.18 0.05 0.0 0.0 0.0 0.02 0.11 0.0 0.0 0.12 0.32 0.0 0.0 0.0 0.0 0.3 0.05 0.0 0.21
AMTR_s00012p00098650 (evm_27.TU.AmTr_v1.0_scaffold00012.51)
 0.0 0.0 0.93 5.74 1.61 0.0 0.0 0.0 0.0 0.0 0.49 0.0 0.06 0.01 0.03 0.0 0.08 0.0 0.0 0.0 1.29 0.0
8.05 12.31 0.48 41.12 5.72 0.0 2.93 0.04 2.09 1.99 5.72 3.98 4.36 5.78 9.75 1.34 4.14 12.62 15.34 12.42 7.81 0.99
AMTR_s00013p00087860 (evm_27.TU.AmTr_v1.0_scaffold00013.40)
 2.46 0.0 0.0 57.7 1.17 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.23 0.0 0.0 0.0 0.0 0.0 10.53 0.0
AMTR_s00015p00231380 (evm_27.TU.AmTr_v1.0_scaffold00015.85)
 0.0 0.0 0.0 62.73 0.0 0.0 0.04 0.18 0.07 0.0 0.37 0.0 0.24 0.39 0.32 0.0 0.0 0.0 0.0 0.0 3.84 0.0
AMTR_s00016p00121780 (evm_27.TU.AmTr_v1.0_scaffold00016.82)
 0.0 0.0 0.0 15.97 1.04 0.0 0.27 0.06 1.15 0.67 0.61 0.36 0.97 0.55 0.92 0.48 0.6 1.87 0.32 1.06 3.64 0.58
0.12 0.0 16.98 21.83 3.73 1.33 6.11 2.34 4.89 7.29 4.57 6.12 8.42 4.91 4.02 5.51 4.6 4.16 4.06 9.58 2.13 8.71
AMTR_s00017p00254610 (evm_27.TU.AmTr_v1.0_scaffold00017.274)
 0.0 0.0 0.0 5.13 0.08 0.0 0.0 0.0 0.0 0.0 0.27 0.0 0.61 0.76 1.03 0.0 0.0 0.68 0.33 2.5 0.0 0.82
AMTR_s00018p00046710 (evm_27.TU.AmTr_v1.0_scaffold00018.12)
 0.0 17.71 52.32 1105.42 381.54 36.28 3.58 0.36 19.08 16.08 31.74 9.37 71.28 52.68 220.38 0.0 11.85 41.0 68.77 36.83 0.0 74.44
AMTR_s00018p00048120 (evm_27.TU.AmTr_v1.0_scaffold00018.13)
 0.0 0.0 0.0 48.75 9.7 0.0 0.11 0.0 0.0 0.11 0.0 0.0 0.13 1.45 3.92 0.0 0.0 0.0 0.0 2.07 2.31 0.9
AMTR_s00021p00190830 (evm_27.TU.AmTr_v1.0_scaffold00021.152)
 0.0 0.0 5.21 33.95 2.65 0.0 0.37 0.05 3.33 1.42 2.68 1.78 1.17 1.62 0.95 2.01 0.98 2.6 1.24 2.31 12.13 0.87
0.0 0.0 0.0 0.55 0.22 0.0 0.0 0.0 0.0 0.01 0.1 0.0 0.03 0.04 0.01 0.0 0.07 0.0 0.0 0.06 0.0 0.0
AMTR_s00023p00228360 (evm_27.TU.AmTr_v1.0_scaffold00023.177)
 0.0 0.0 0.0 11.74 3.62 0.0 0.0 0.0 0.0 0.06 0.55 0.0 0.07 0.01 0.08 0.26 0.65 0.0 0.17 0.0 0.9 0.09
AMTR_s00023p00232620 (evm_27.TU.AmTr_v1.0_scaffold00023.189)
 0.0 0.0 0.0 15.81 2.87 0.0 0.02 0.0 0.0 0.0 3.85 0.0 1.99 1.04 1.49 3.78 4.57 1.96 0.93 3.26 5.71 1.44
AMTR_s00025p00191690 (evm_27.TU.AmTr_v1.0_scaffold00025.235)
 0.0 0.0 5.12 9.61 0.21 0.0 0.0 0.0 0.0 0.0 1.1 1.26 1.28 0.0 0.12 0.0 0.0 5.52 2.47 0.0 0.0 5.67
AMTR_s00025p00218200 (evm_27.TU.AmTr_v1.0_scaffold00025.300)
 14.82 0.0 14.55 40.4 6.36 0.37 0.03 0.1 0.03 0.03 11.01 2.17 4.68 3.49 31.98 0.98 0.42 1.59 2.04 2.05 0.85 0.37
AMTR_s00030p00229680 (evm_27.TU.AmTr_v1.0_scaffold00030.183)
 0.0 0.0 0.0 10.33 0.78 0.0 0.0 0.12 0.08 0.04 0.0 1.01 0.49 0.15 0.1 0.0 0.46 0.0 0.45 0.33 0.8 0.0
AMTR_s00032p00238720 (evm_27.TU.AmTr_v1.0_scaffold00032.271)
 0.0 0.0 0.0 45.64 0.77 0.0 0.0 0.0 0.07 0.11 0.26 0.0 0.35 0.05 0.07 0.0 0.0 0.0 0.0 0.57 1.39 0.06
AMTR_s00033p00099950 (evm_27.TU.AmTr_v1.0_scaffold00033.43)
 12.36 33.34 71.73 155.08 1.72 0.68 0.05 0.1 0.4 0.33 42.31 34.28 24.03 7.35 8.41 2.16 40.86 37.69 25.96 29.07 6.89 77.25
AMTR_s00033p00172620 (evm_27.TU.AmTr_v1.0_scaffold00033.122)
 12.58 51.61 55.6 331.4 18.48 0.0 0.1 0.15 0.05 0.0 30.19 16.4 35.79 29.41 276.02 5.92 0.0 10.53 138.83 49.71 10.31 12.6
AMTR_s00039p00115710 (evm_27.TU.AmTr_v1.0_scaffold00039.72)
 47.05 39.27 29.98 137.54 43.98 0.0 11.81 0.09 5.02 7.07 36.77 27.4 35.77 20.39 13.82 28.73 19.79 17.62 23.47 25.02 12.3 27.04
AMTR_s00039p00150750 (evm_27.TU.AmTr_v1.0_scaffold00039.103)
 0.0 0.0 0.0 3.58 0.17 0.0 0.0 0.0 0.02 0.03 0.09 0.0 0.15 0.07 0.01 0.0 0.0 0.29 0.0 0.13 3.4 0.02
AMTR_s00040p00199260 (evm_27.TU.AmTr_v1.0_scaffold00040.201)
 15.79 16.85 2.3 110.9 24.28 0.0 0.12 0.0 0.2 0.26 54.71 72.13 39.31 10.1 29.59 11.74 8.85 30.99 30.01 12.87 14.69 36.78
AMTR_s00041p00138920 (evm_27.TU.AmTr_v1.0_scaffold00041.97)
 0.0 0.0 0.0 0.92 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.09 0.0 0.0 0.0 0.0 0.31 0.71 0.06
AMTR_s00044p00124390 (evm_27.TU.AmTr_v1.0_scaffold00044.108)
 0.0 0.0 0.0 3.57 0.13 0.0 0.0 0.0 0.0 0.0 0.18 0.0 0.2 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.3
AMTR_s00047p00220710 (evm_27.TU.AmTr_v1.0_scaffold00047.172)
 0.0 0.0 0.0 6.42 0.31 0.0 0.01 0.0 0.06 0.02 0.55 0.29 0.55 0.16 0.22 0.26 1.0 0.5 0.27 0.17 1.74 0.79
AMTR_s00059p00100400 (evm_27.TU.AmTr_v1.0_scaffold00059.73)
 0.0 0.0 0.0 12.5 2.02 0.0 0.22 0.0 0.56 0.87 1.63 1.84 6.77 1.76 1.89 0.0 1.82 1.61 1.85 2.86 5.8 2.4
152.74 434.18 110.83 1870.82 779.34 1.86 0.62 2.52 1.73 2.21 103.16 54.8 139.93 32.46 218.76 21.8 49.44 125.58 178.97 117.12 36.3 91.01
AMTR_s00062p00133370 (evm_27.TU.AmTr_v1.0_scaffold00062.114)
 0.0 0.0 7.5 103.28 5.31 0.0 0.0 20.17 0.0 0.0 0.0 0.0 0.0 0.08 0.38 0.0 0.0 0.0 0.0 0.0 14.72 0.17
0.84 19.44 0.0 48.39 4.29 0.0 3.14 0.0 4.68 4.12 10.52 10.53 7.19 6.98 5.42 6.93 9.24 6.73 4.95 4.27 6.04 7.01
AMTR_s00062p00187810 (evm_27.TU.AmTr_v1.0_scaffold00062.188)
 0.0 0.0 0.0 12.74 0.3 0.0 0.12 0.0 0.29 0.04 0.57 0.0 0.41 1.11 0.42 1.41 3.49 0.0 0.0 0.27 4.93 0.28
AMTR_s00062p00206330 (evm_27.TU.AmTr_v1.0_scaffold00062.222)
 1736.65 1685.89 1949.07 9336.15 2811.47 1709.59 571.04 123.15 110.01 171.81 2124.47 1450.36 4225.37 2877.67 1727.95 2780.19 363.57 879.9 3715.85 6191.67 475.3 4675.96
AMTR_s00065p00048910 (evm_27.TU.AmTr_v1.0_scaffold00065.24)
 3.1 0.0 0.0 10.57 1.91 0.0 0.32 0.5 0.6 0.44 2.14 0.71 2.48 1.09 2.1 0.6 0.54 1.08 0.87 1.77 5.54 0.87
AMTR_s00067p00162430 (evm_27.TU.AmTr_v1.0_scaffold00067.164)
 0.0 0.0 0.0 10.0 4.31 0.0 0.04 0.0 0.21 0.04 2.2 0.0 1.66 0.97 1.4 0.0 0.55 0.96 1.4 3.19 0.86 0.98
AMTR_s00069p00203070 (evm_27.TU.AmTr_v1.0_scaffold00069.221)
 4028.25 805.19 994.39 13563.9 628.56 307.62 30.37 37.4 10.53 11.59 2686.15 6126.04 4229.78 4408.15 2200.56 3435.92 541.36 1246.89 1069.39 389.26 950.45 8176.36
AMTR_s00070p00148660 (evm_27.TU.AmTr_v1.0_scaffold00070.89)
 0.03 0.02 0.0 1.5 0.15 0.0 0.0 0.0 0.01 0.02 0.11 0.0 0.21 0.14 0.12 0.09 0.15 0.0 0.0 0.18 1.3 0.11
AMTR_s00071p00160560 (evm_27.TU.AmTr_v1.0_scaffold00071.155)
 0.0 0.0 0.0 3.56 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.05 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.02
AMTR_s00072p00151120 (evm_27.TU.AmTr_v1.0_scaffold00072.86)
 0.0 0.0 0.0 22.7 2.33 0.0 0.09 0.0 0.27 0.12 1.64 2.49 1.0 1.13 1.11 0.56 3.13 0.0 0.32 2.89 4.56 1.13
AMTR_s00077p00176570 (evm_27.TU.AmTr_v1.0_scaffold00077.195)
 54.47 11.94 26.44 291.52 28.66 18.65 67.06 24.57 45.85 64.99 15.98 23.0 61.79 69.21 209.23 34.9 14.35 20.4 21.7 73.28 12.74 62.35
AMTR_s00079p00188510 (evm_27.TU.AmTr_v1.0_scaffold00079.111)
 0.0 2.08 0.0 45.81 18.68 0.0 0.8 11.03 4.99 5.59 11.6 6.26 17.58 6.78 33.03 11.86 2.77 4.75 8.83 8.29 0.33 17.1
AMTR_s00079p00190430 (evm_27.TU.AmTr_v1.0_scaffold00079.116)
 0.0 7.99 0.19 27.51 8.57 0.0 0.2 0.0 0.21 0.1 7.25 5.66 16.87 5.71 6.2 9.57 3.62 4.95 5.05 14.92 7.41 5.69
AMTR_s00080p00025640 (evm_27.TU.AmTr_v1.0_scaffold00080.3)
 4.31 0.0 0.0 36.17 2.63 0.0 0.27 0.0 0.69 0.67 3.57 2.31 0.84 0.99 0.81 0.0 0.82 0.0 1.03 0.68 11.79 1.22
3352.83 989.26 818.16 5451.17 1442.88 39.32 0.32 5.13 0.03 0.0 643.71 405.38 136.84 15.86 875.99 0.64 150.38 909.49 779.25 0.74 1.49 0.3
AMTR_s00098p00121640 (evm_27.TU.AmTr_v1.0_scaffold00098.33)
 0.0 0.0 0.0 4.53 0.04 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.2 0.48 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00111p00049270 (evm_27.TU.AmTr_v1.0_scaffold00111.24)
 0.0 0.0 0.0 0.52 0.13 0.0 0.0 0.0 0.04 0.04 0.0 0.0 0.05 0.0 0.07 0.0 0.0 0.0 0.0 0.04 0.0 0.0
0.05 0.01 9.3 10.55 0.24 0.11 0.01 0.0 0.0 0.02 2.7 2.94 1.19 0.13 0.15 0.0 2.67 0.83 0.76 0.11 0.11 10.72
AMTR_s00118p00053530 (evm_27.TU.AmTr_v1.0_scaffold00118.5)
 39.13 11.88 0.0 77.61 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 3.1 0.0 0.0 0.0 0.28 0.0 0.49 0.0 0.0 0.0
AMTR_s00120p00114500 (evm_27.TU.AmTr_v1.0_scaffold00120.56)
 0.0 0.0 0.0 13.07 0.08 0.0 0.0 0.0 0.05 0.12 2.84 0.82 0.37 0.58 0.33 0.28 1.01 1.07 1.09 2.26 7.39 0.18
AMTR_s00133p00065590 (evm_27.TU.AmTr_v1.0_scaffold00133.23)
 0.0 0.0 0.0 1.73 0.36 0.0 0.02 0.0 0.01 0.0 0.0 0.0 0.07 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0
AMTR_s00140p00047880 (evm_27.TU.AmTr_v1.0_scaffold00140.19)
 0.0 0.0 0.0 11.17 0.34 0.0 0.05 0.0 0.0 0.05 1.63 0.0 0.34 0.23 0.23 0.0 1.36 0.0 0.26 0.3 3.66 0.13
AMTR_s00158p00089720 (evm_27.TU.AmTr_v1.0_scaffold00158.21)
 5.69 2.72 6.99 44.54 1.08 1.02 0.13 0.0 0.2 0.1 3.13 0.0 5.03 11.85 3.22 0.0 1.08 1.67 0.0 0.1 0.0 2.32
AMTR_s00179p00011930 (evm_27.TU.AmTr_v1.0_scaffold00179.2)
 0.0 0.0 0.0 14.78 6.77 0.0 0.02 0.08 0.09 0.05 1.26 3.65 2.23 0.7 7.74 0.41 0.6 1.6 0.81 2.71 2.39 3.17
2.2 5.82 5.19 59.15 3.58 0.0 0.0 0.0 0.03 0.0 11.6 6.98 16.52 3.93 16.37 5.21 13.05 13.28 11.65 23.52 8.68 12.89
AMTR_s00193p00044180 (evm_27.TU.AmTr_v1.0_scaffold00193.12)
 0.0 26.53 0.11 166.76 3.48 0.0 0.19 0.19 0.2 0.26 19.18 1.27 11.92 0.27 5.0 0.0 23.85 0.0 2.17 0.68 0.0 37.26
AMTR_s00201p00035840 (evm_27.TU.AmTr_v1.0_scaffold00201.6)
 10.03 18.26 15.85 54.29 9.93 0.0 0.0 0.1 0.0 0.0 14.32 18.7 21.19 1.59 64.72 0.0 0.18 0.0 1.44 0.14 0.0 27.03
AMTR_s00207p00029560 (evm_27.TU.AmTr_v1.0_scaffold00207.5)
 0.0 0.0 0.0 6.26 0.26 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.15 1.16 0.0 0.07 0.0 0.0 0.0 0.0 0.0
AMTR_s00389p00010880 (evm_27.TU.AmTr_v1.0_scaffold00389.1)
 0.0 0.0 0.0 33.61 3.6 0.0 0.18 0.0 0.19 0.22 0.97 0.0 1.89 0.96 0.93 0.0 1.08 0.0 0.46 2.3 6.53 1.52
AMTR_s00487p00011620 (evm_27.TU.AmTr_v1.0_scaffold00487.1)
 0.0 0.0 0.0 3.4 0.0 0.0 0.19 0.0 0.13 0.14 0.31 0.0 1.37 0.33 0.51 0.72 0.78 0.0 0.0 1.16 0.0 0.66
AMTR_s00999p00010630 (evm_27.TU.AmTr_v1.0_scaffold00999.1)
 0.0 3.72 5.41 54.02 3.76 0.0 0.0 0.0 0.0 0.0 1.72 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.0 4.64 0.0
AMTR_s01507p00006460 (evm_27.TU.AmTr_v1.0_scaffold01507.1)
 0.0 0.0 0.0 25.36 1.88 0.0 0.12 0.0 0.42 0.36 0.33 0.61 0.73 0.51 0.43 0.83 0.14 0.54 0.0 0.3 4.81 0.58
AMTR_s01839p00009880 (evm_27.TU.AmTr_v1.0_scaffold01839.1)
 20.09 1.35 3.45 110.61 14.02 0.0 0.58 0.0 0.0 0.0 0.0 0.0 0.15 57.51 131.81 0.0 0.0 0.0 0.0 27.33 0.0 17.96
AMTR_s03606p00006450 (evm_27.TU.AmTr_v1.0_scaffold03606.1)
 0.0 0.0 0.0 15.25 3.54 0.0 0.35 0.0 0.32 0.39 0.0 0.0 1.78 1.09 1.98 0.92 0.0 0.0 0.0 0.87 0.0 0.45
AMTR_s04226p00007190 (evm_27.TU.AmTr_v1.0_scaffold04226.2)
 0.0 0.0 0.0 60.5 4.85 0.0 0.0 7.5 0.05 0.0 0.0 0.0 0.06 0.0 0.0 0.0 0.0 0.0 0.0 0.0 4.28 0.0
0.0 0.0 0.0 1.04 0.33 0.0 0.01 0.0 0.09 0.01 0.08 0.0 0.03 0.02 0.01 0.0 0.0 0.42 0.37 0.0 0.64 0.0
AMTR_s05407p00001050 (evm_27.TU.AmTr_v1.0_scaffold05407.1)
 0.0 0.9 0.0 10.49 0.88 0.0 0.85 3.32 1.65 3.1 0.0 0.0 0.04 0.11 0.03 0.0 0.0 0.0 0.17 0.0 9.36 0.08

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)