Heatmap: Cluster_96 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- - - - - - - - - - - - - - -0.4 - 3.6 3.01 - - - 4.72 - - - - - - - -0.35 - - - - - - - - - - - - - - - - - -
- - - 3.89 - - 2.43 - - - - - - - -0.82 - 3.19 1.6 - - - - - 2.3 2.47 2.19 - - - - - - - - - - - - - - - - - - - - - -
- - - - -0.88 1.92 - -0.04 -0.02 -1.4 -0.5 0.26 - - -3.87 1.14 1.9 - - 0.07 - 1.12 3.57 - 1.46 1.13 0.19 -1.27 2.09 -2.0 -1.07 - -2.38 -1.72 -1.71 -1.29 -1.23 - - - - - - -0.26 - - 0.29 1.65
- - 1.19 - - - - - - - - - - - - - - 1.93 - - 2.12 - - - 1.99 - - - 3.2 -0.7 - 1.75 - - - - - - 2.73 - - - 2.2 - - - 1.98 2.39
- - - - - - - - - - - - - - 1.37 - - - - - - 5.5 - - - - - - - - - - - - - - - - - - - - - - - - - -
0.32 1.69 -0.26 -2.03 -3.04 0.8 1.04 -0.31 0.13 1.07 0.15 0.13 1.03 -0.69 1.89 1.24 -0.42 -1.36 - -5.08 -6.06 -2.45 -2.37 -2.31 -3.76 0.97 -0.25 -0.84 -2.04 0.27 0.08 -3.09 -1.23 -0.15 1.49 -2.01 -0.47 0.1 -2.62 0.84 -0.85 0.67 0.56 -0.94 -0.76 0.2 -0.42 0.04
0.79 0.79 -0.29 1.23 0.29 0.94 1.41 1.54 0.8 -0.3 -1.71 -1.27 -1.42 -1.61 1.43 0.36 -0.68 0.27 0.25 -0.0 0.07 -0.1 1.22 -1.1 -0.79 -1.01 -1.72 -0.29 -1.84 0.63 -0.5 -0.73 -0.93 -1.05 -3.66 -1.45 -1.35 0.25 -1.18 -0.61 -0.98 -1.14 -0.77 -0.46 -1.22 0.06 -0.16 0.86
- - - - - - - - - - - - - - 0.09 - 4.1 - - - - - - - - 4.9 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - 2.78 - - - - 1.28 - - -2.56 3.07 3.91 - - - - - - - - 2.45 - - 1.02 - - - - - - - - - - - - - - - - - - 2.91
- - - - 2.28 - - - - - - - - - - - 4.37 - - - - - - 3.85 - - - - - - - - - - - - - - - - - - - - - - - 3.0
- - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - - - - - - - - - - - - 5.05 - - - - - - - - - - - - - - - - - - - - - 3.88
-5.85 -0.05 1.05 -6.18 1.15 1.52 1.24 1.1 -2.97 1.19 -4.0 -5.35 -1.92 -3.81 1.2 0.88 1.67 -2.64 -1.0 0.81 -0.35 -0.77 0.65 -4.66 -2.02 -1.64 -2.94 0.57 -2.47 0.15 -1.71 -0.16 -0.64 -1.19 -3.25 -0.92 -1.14 0.57 -1.35 -0.36 -2.93 -2.61 -0.54 0.95 -0.52 0.86 1.8 0.5
- -17.98 -15.69 -12.35 -1.55 -19.81 -17.45 -16.24 -15.07 -11.52 3.08 1.06 -11.6 -11.91 0.38 -16.72 -0.32 -1.1 -15.09 -17.2 -20.04 -18.28 -18.13 -14.48 0.62 0.59 -11.99 1.49 -10.43 1.93 1.03 1.19 1.64 0.99 -11.4 3.53 1.26 -14.0 -12.02 -13.64 -14.28 -13.95 -15.05 -10.4 -9.56 -14.46 -13.38 0.59
- - - - - - - - - - - - - - 4.27 - - - - - - - - - - - - - - 4.84 - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 1.46 4.07 3.9 - - - - - - - - 3.76 - - - - - - - - - - - - - - - - - - - - - -
- - - - 1.26 - - - - - - - - - 0.54 - 3.51 - - - - - - - - 5.01 - - - -0.82 - - - - - - - - - - - - - - - - - -
- - - - - - - - - 0.98 - - - - 1.39 - 1.79 2.07 - 2.8 - - - - 1.95 1.69 - - 1.24 1.3 - - -0.21 2.52 - - - 1.66 - 1.56 - - - - - 1.64 - 0.09
1.5 - -2.88 -6.29 - -3.6 -0.0 - 0.48 0.57 -5.47 -3.73 0.13 -1.3 1.21 -2.25 -0.59 -2.57 - - - -3.33 - -3.67 -4.26 -2.6 -3.71 2.28 2.0 1.26 1.31 -1.72 0.12 1.83 -0.06 0.43 0.97 -0.57 1.06 -0.75 -0.76 -1.91 -0.05 0.7 0.27 -0.05 0.78 1.0
- -0.32 - 1.38 -1.81 2.7 2.45 2.25 1.12 - - - - - 0.13 -0.12 - - 0.76 1.66 - 3.85 - - -0.1 0.89 - - -0.75 -0.7 -2.81 - - - - - - - - - - - - - - - - -
- - 4.95 - - - - - - - - - - - 3.84 - - - - - - - - - - - - - - - -19.42 - - - - 1.43 - - - - - - - - - - - -
- - 2.16 2.53 - - - - - - - - - - -0.3 - - 3.69 - - - - - - - 4.59 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - 1.84 - - - - - 1.01 - - 1.44 - - - 2.82 2.01 3.07 - 2.42 -2.17 - - - - 2.57 - - - - - - - - - - 0.98 - 2.74
- - - - - - - - - - - - - - 1.76 5.48 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- 0.21 1.63 - -4.49 -3.71 -1.13 - 0.0 -0.48 0.73 1.04 0.64 0.67 1.67 0.49 0.41 -0.66 - -2.24 -4.14 - - -1.94 -1.56 0.5 -0.51 3.64 -3.7 -2.61 1.26 -1.1 0.17 -4.7 -4.69 1.91 0.68 -0.72 - - - - -4.47 -3.23 -1.89 -0.12 -0.75 -1.36
-0.89 -1.03 -1.62 -1.17 - -0.55 1.22 -0.13 0.64 1.86 -2.46 -1.32 1.01 0.0 2.09 -0.87 -0.44 2.0 -1.49 -4.95 - -2.96 - 0.73 -0.92 -0.72 -5.92 -0.66 1.34 -0.79 -2.13 2.3 0.19 0.42 -2.0 0.54 -0.15 -0.67 -0.01 -1.7 - - -2.8 0.42 0.34 -1.4 -0.31 -0.38
- - - 0.52 -0.78 -0.57 - 0.69 - -0.7 1.9 0.96 -0.64 - 0.07 - 1.42 -0.32 - - - 0.53 - -0.75 0.46 -0.24 -0.6 - 3.57 -1.16 -1.81 - -0.07 -0.16 1.44 1.12 - - - -0.8 - - -0.9 0.29 0.14 -1.35 - 2.07
-0.74 -1.58 -1.77 -7.33 -9.17 -3.57 -3.79 -1.99 -0.02 0.85 -0.53 -0.63 -1.08 -0.33 2.64 -3.26 -1.26 -1.19 2.39 1.15 1.52 0.07 0.43 - -0.29 0.73 0.59 -2.76 -0.63 -0.23 -1.96 -2.26 -0.1 1.83 -0.66 -2.43 1.15 -2.43 -1.7 -4.9 -4.84 -4.88 - -2.32 0.23 - - 2.44
- - - - - - - - - - - - - - 1.49 - 5.5 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 1.16 -0.6 2.64 2.23 - - - - - - 1.95 -0.07 - 1.37 1.08 - - - 1.76 - - 0.57 -2.95 - - - 0.22 - 0.77 - - 0.8 - - 1.66 - - 1.87 - - 1.95 0.46 - - 1.59
- - - - 3.22 - - - - 3.38 - - - - - - - - - - - 4.35 - - - - - - - -0.53 - - - - - - - - - - - - - - - - 2.84 -
- - - - 3.54 - - - - - - - - - 0.51 - 3.98 4.26 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-2.45 - 0.53 -0.43 - -0.47 0.32 -1.99 -0.87 -1.72 -2.45 - -2.08 -1.72 -7.73 - -0.37 -1.92 0.82 -0.78 0.99 -0.29 - -1.4 -1.66 -0.17 - -1.91 -1.76 1.53 -1.04 - -0.77 -0.04 -0.63 -2.05 -0.1 -0.25 -1.19 1.7 0.62 1.11 0.82 3.38 0.72 0.3 1.55 -0.99
0.79 -2.52 -4.04 -3.0 -3.04 0.91 2.22 1.98 2.16 1.57 -0.66 -0.93 0.75 -1.37 1.27 -0.43 -0.46 -2.08 -6.17 -2.29 -3.54 -1.39 - -4.18 -3.06 0.47 -4.15 -4.7 -4.0 -0.05 1.74 1.03 -0.4 -0.4 -3.88 -1.18 0.43 0.47 -1.81 0.32 -0.03 -0.59 -0.23 -1.28 -1.61 0.38 -0.7 -1.53
- - - 1.71 - - - - - 1.69 2.14 3.82 1.74 0.0 1.69 - - - - - - - - - - -0.27 - - 2.01 0.59 - - - 0.58 0.54 - - 0.81 - -0.38 - - - - - 0.97 - 0.7
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - -
1.26 1.7 1.36 -2.9 0.02 2.27 2.41 2.37 2.07 0.25 -5.06 -5.13 0.69 -0.39 1.26 -1.95 0.48 0.13 -4.1 -2.75 -2.35 -1.4 -2.12 -1.69 -2.3 1.32 -3.42 -0.01 -1.99 -1.47 -1.52 -2.54 -2.11 -2.32 -0.48 -1.14 -1.04 -0.85 -2.93 -2.43 -6.17 -5.51 -2.89 -2.82 -3.16 -1.23 -4.33 -1.84
- - - - - - - - - - - - - - 2.14 - - - - - - - - - - 5.45 - - - - - - - - - - - - - - - - - - - - - -
- - - - - - - - - - - - - - 0.81 5.53 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
2.46 2.65 -0.44 0.27 -3.21 1.15 1.04 1.19 2.81 -2.12 -4.96 -6.73 -0.79 -0.94 2.22 1.03 0.42 0.71 -6.1 -4.47 -5.2 -3.93 -4.26 -0.45 -2.08 1.51 -3.27 -4.18 -6.4 -0.15 -6.06 -6.62 -2.88 -1.42 -5.71 -4.71 -5.35 -7.69 -0.86 -4.06 -4.56 -4.02 -4.04 -8.02 -2.23 -7.99 -4.93 1.49
- - - - 0.0 - - - - 1.44 - - - - -0.67 - 1.46 0.4 - - - - - - 1.19 - - 3.03 - -1.45 - - 0.06 3.56 - - - - - 1.89 - - - 2.44 0.74 - 1.18 1.51
- - -1.84 0.61 -3.24 2.24 0.39 2.85 - -1.54 - -2.41 -2.57 - -0.76 - 2.31 -1.83 - -1.69 - 0.26 - -2.13 2.24 -0.63 2.69 - 3.18 -1.65 -2.67 - -3.15 - -1.96 - - - -1.31 -2.35 - -2.08 - -1.63 -2.15 - - 0.49
- - 3.1 - - - - 2.35 - - - - - 2.12 0.18 - - - - - - - - 2.1 2.19 1.99 - - 1.93 - - 1.81 - - - - - - - - - - - - - - - 3.12
- - -0.72 0.34 - -1.52 0.07 - - -3.66 -1.43 1.0 -1.37 -1.06 -0.76 -0.78 2.24 -2.49 - -0.94 - -1.36 - - -1.03 -0.69 -1.24 2.2 -1.72 0.17 -1.37 1.69 0.35 2.46 0.08 - -0.79 -2.31 -0.14 -1.03 1.18 -0.21 - 2.17 0.62 -0.74 0.14 1.26
- - -1.42 - - - 1.51 2.13 - -1.26 -0.2 1.87 -1.15 -1.55 -1.6 0.89 0.56 - - - - 0.03 - -1.58 -1.21 0.42 0.24 2.61 -0.54 0.58 0.49 0.14 -1.55 1.47 0.73 - -1.79 - 0.84 -0.96 0.26 0.47 0.2 0.62 0.83 - -0.63 -0.18
- - - - - - - - - - - - 3.67 - 0.8 - 3.66 - - - - - - - - 3.21 - - - - - - - - - 3.18 - - - - - - - - - - - 1.35
- - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
0.11 0.33 0.57 -0.47 0.57 1.04 1.39 1.54 0.18 0.01 -0.36 -0.45 0.48 -1.19 0.48 0.28 1.38 1.04 0.14 0.81 0.72 -1.11 -0.32 -0.01 -0.36 0.41 -0.52 0.41 -2.03 -0.38 -0.05 -1.51 -1.76 -4.26 -2.16 -18.38 0.12 0.35 -1.92 -0.29 -1.15 -2.3 0.13 -1.49 -1.93 0.2 -1.44 -1.07
- - - - - - - - - - - - - - 5.58 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - - 2.84 - - - - - - - - - - - - 5.25 - - - - - - - - - - - 1.41 - - - - - - - - - - - - - - - - - -
- - - 5.4 - - - - - - - - - - 2.55 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - - 5.4 - - - - - - - - - - 2.55 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.