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Heatmap: Cluster_9 (HCCA)

View as: (view zlog-transformed or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Showing raw values)

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Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00261550 (evm_27.TU.AmTr_v1.0_scaffold00001.380)
 0.0 0.0 0.0 0.0 0.23 0.0 0.03 0.0 0.14 0.06 0.0 0.0 0.18 0.01 0.17 0.28 0.38 0.0 0.0 0.02 0.32 0.12
AMTR_s00001p00272320 (evm_27.TU.AmTr_v1.0_scaffold00001.516)
 0.0 0.0 0.0 0.0 0.33 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.02 0.09 0.0 0.3 0.0 0.0 0.06 0.0 0.0
AMTR_s00002p00239340 (evm_27.TU.AmTr_v1.0_scaffold00002.293)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0
AMTR_s00004p00044490 (evm_27.TU.AmTr_v1.0_scaffold00004.26)
 0.0 0.0 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.24 0.0 1.55 0.0 0.0 0.0 0.0 0.0
AMTR_s00004p00239990 (evm_27.TU.AmTr_v1.0_scaffold00004.232)
 0.0 0.0 0.0 0.0 0.17 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.94 0.0 0.0 0.0 0.0 0.49
AMTR_s00005p00081400 (evm_27.TU.AmTr_v1.0_scaffold00005.16)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.0 0.0
AMTR_s00006p00252380 (evm_27.TU.AmTr_v1.0_scaffold00006.161)
 0.0 0.0 0.0 0.0 3.83 0.0 0.17 0.0 0.0 0.44 0.0 0.0 0.0 0.0 0.3 0.0 4.02 0.0 0.0 0.0 0.0 0.14
AMTR_s00007p00264040 (evm_27.TU.AmTr_v1.0_scaffold00007.344)
 0.0 0.0 0.0 0.0 0.64 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.12 0.06 0.0 0.33 0.0 0.0 0.27 0.0 0.0
AMTR_s00009p00235690 (evm_27.TU.AmTr_v1.0_scaffold00009.194)
 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.06 0.0 0.11 0.0 0.0 0.0 0.0 0.0
AMTR_s00009p00263060 (evm_27.TU.AmTr_v1.0_scaffold00009.353)
 0.0 0.0 0.0 0.08 0.61 0.0 0.0 0.0 0.01 0.0 0.0 0.19 0.05 0.01 0.04 0.0 0.45 0.0 0.0 0.0 0.0 0.0
AMTR_s00014p00075490 (evm_27.TU.AmTr_v1.0_scaffold00014.22)
 9.68 13.85 16.48 0.0 31.44 0.0 19.32 1.29 10.11 9.26 13.5 13.92 21.63 14.8 11.77 21.96 53.22 16.25 13.94 18.86 7.29 17.12
AMTR_s00016p00260260 (evm_27.TU.AmTr_v1.0_scaffold00016.378)
 0.0 0.0 0.0 0.0 1.15 0.0 0.26 0.0 0.09 0.09 0.0 0.0 0.1 0.27 0.12 0.0 1.44 0.0 0.0 0.0 0.0 0.45
AMTR_s00030p00169600 (evm_27.TU.AmTr_v1.0_scaffold00030.104)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.43 0.0 0.0 0.0 0.0 0.0
AMTR_s00046p00198450 (evm_27.TU.AmTr_v1.0_scaffold00046.125)
 0.0 0.0 0.0 0.0 0.76 0.0 0.13 0.0 0.04 0.04 0.0 0.0 0.09 0.0 0.09 0.0 0.83 0.0 0.0 0.0 0.0 0.22
AMTR_s00050p00213390 (evm_27.TU.AmTr_v1.0_scaffold00050.74)
 0.0 0.0 0.0 0.0 0.27 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.08 0.0 0.0 0.0 0.0 0.0
AMTR_s00051p00205220 (evm_27.TU.AmTr_v1.0_scaffold00051.85)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.02 0.0 0.16 0.0 0.0 0.0 0.0 0.0
0.0 0.02 0.04 0.0 0.03 0.0 0.0 0.0 0.02 0.03 0.15 0.0 0.0 0.0 0.0 0.0 0.72 0.0 0.0 0.0 0.0 0.0
AMTR_s00053p00145300 (evm_27.TU.AmTr_v1.0_scaffold00053.92)
 0.0 0.0 0.0 0.0 0.09 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.03 0.0 0.03 0.0 0.5 0.0 0.0 0.0 0.0 0.0
AMTR_s00057p00078460 (evm_27.TU.AmTr_v1.0_scaffold00057.49)
 0.0 0.0 0.0 0.0 0.22 0.0 0.03 0.0 0.2 0.05 0.0 0.0 0.12 0.01 0.14 0.0 0.28 0.0 0.0 0.06 0.0 0.11
AMTR_s00064p00128570 (evm_27.TU.AmTr_v1.0_scaffold00064.48)
 0.0 0.0 0.0 0.0 0.22 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.22 0.0 0.08 0.0 8.51 0.0 0.0 0.0 0.0 0.95
AMTR_s00068p00158640 (evm_27.TU.AmTr_v1.0_scaffold00068.110)
 42.6 34.59 34.94 18.58 0.23 0.0 0.0 0.0 0.05 0.0 88.63 84.6 21.52 0.17 0.2 0.0 318.65 20.2 0.0 0.11 0.0 0.0
AMTR_s00070p00059720 (evm_27.TU.AmTr_v1.0_scaffold00070.26)
 0.0 0.0 0.0 0.0 0.55 0.0 0.05 0.0 0.09 0.11 0.0 0.47 0.02 0.0 0.02 0.0 0.77 0.0 0.0 0.0 0.0 0.13
AMTR_s00070p00074560 (evm_27.TU.AmTr_v1.0_scaffold00070.33)
 0.0 0.0 0.0 0.0 0.45 0.0 0.0 0.0 0.08 0.14 0.0 0.0 1.13 0.28 1.5 0.0 21.56 0.0 0.0 1.12 9.06 3.36
AMTR_s00072p00038970 (evm_27.TU.AmTr_v1.0_scaffold00072.9)
 0.0 0.0 0.0 0.0 1.17 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.28 0.17 0.57 0.0 4.01 0.0 0.0 0.0 0.0 0.44
AMTR_s00073p00065320 (evm_27.TU.AmTr_v1.0_scaffold00073.18)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 1.54 0.0 0.0 0.13 0.0 0.0
AMTR_s00077p00076630 (evm_27.TU.AmTr_v1.0_scaffold00077.55)
 0.0 0.0 0.0 0.17 8.38 0.0 0.28 0.0 0.15 0.28 1.76 1.98 0.99 1.17 1.83 0.0 7.62 0.0 0.0 0.0 0.78 5.28
AMTR_s00079p00066130 (evm_27.TU.AmTr_v1.0_scaffold00079.22)
 0.0 0.0 0.0 0.0 1.41 0.0 0.38 0.28 1.8 0.5 0.0 0.0 1.76 0.0 0.15 0.0 2.0 0.0 0.0 0.0 0.0 1.23
AMTR_s00080p00053660 (evm_27.TU.AmTr_v1.0_scaffold00080.15)
 0.0 0.0 0.0 0.0 0.03 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0
AMTR_s00080p00164230 (evm_27.TU.AmTr_v1.0_scaffold00080.83)
 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.48 0.0 0.0 0.0 0.0 0.0
AMTR_s00089p00170350 (evm_27.TU.AmTr_v1.0_scaffold00089.100)
 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.14 0.02 0.0 0.0 0.11 0.0 0.0 0.0 0.0 0.18
AMTR_s00095p00153570 (evm_27.TU.AmTr_v1.0_scaffold00095.129)
 0.0 0.0 0.0 0.0 0.04 0.0 0.0 0.0 0.01 0.03 0.0 0.0 0.0 0.0 0.05 0.0 0.13 0.0 0.0 0.0 0.0 0.0
AMTR_s00105p00100250 (evm_27.TU.AmTr_v1.0_scaffold00105.53)
 0.0 0.0 0.0 0.0 0.12 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.08 0.0 0.09 0.0 1.42 0.0 0.0 0.0 0.0 0.0
AMTR_s00108p00101480 (evm_27.TU.AmTr_v1.0_scaffold00108.18)
 0.0 0.0 0.0 0.0 5.88 0.0 1.02 0.14 0.99 0.74 0.0 0.0 0.94 0.64 2.21 0.0 4.78 0.0 0.0 0.17 0.0 4.49
AMTR_s00113p00002460 (evm_27.TU.AmTr_v1.0_scaffold00113.1)
 0.0 0.0 0.0 0.0 1.2 0.0 0.11 0.0 0.3 0.41 0.0 0.0 0.14 0.0 0.04 0.0 1.88 0.0 1.23 0.0 0.0 0.0
AMTR_s00122p00105310 (evm_27.TU.AmTr_v1.0_scaffold00122.46)
 0.0 0.0 0.0 0.0 0.34 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.59 0.0 0.0 0.0 0.0 0.0
AMTR_s00136p00044100 (evm_27.TU.AmTr_v1.0_scaffold00136.12)
 0.6 0.0 0.0 1.13 0.0 0.0 2.32 0.0 3.7 3.2 2.8 0.0 0.0 0.55 0.29 0.0 14.9 0.0 4.16 0.0 0.0 2.22
0.0 0.0 0.0 0.0 0.02 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.05 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.08 0.0 0.0 0.0 0.1 0.01 0.0 0.0 0.01 0.0 0.0 0.0 0.15 0.0 0.0 0.0 0.0 0.0
AMTR_s00141p00080740 (evm_27.TU.AmTr_v1.0_scaffold00141.24)
 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.95 0.0 0.0 0.05 0.47 0.0
AMTR_s00154p00094940 (evm_27.TU.AmTr_v1.0_scaffold00154.64)
 0.0 0.0 0.0 0.0 0.13 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.31 0.0 0.0 0.0 0.0 0.0
AMTR_s00167p00031510 (evm_27.TU.AmTr_v1.0_scaffold00167.13)
 0.0 0.0 0.24 0.24 0.07 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.22 0.13 0.26 0.0 1.65 0.0 0.0 0.52 0.0 0.43
AMTR_s00355p00015840 (evm_27.TU.AmTr_v1.0_scaffold00355.1)
 0.0 0.0 0.0 0.0 0.1 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 0.0 1.09 0.0 0.0 0.0 0.0 0.0
0.0 0.0 0.0 0.0 0.29 0.0 0.02 0.0 0.0 0.01 0.07 0.27 0.02 0.0 0.0 0.0 0.37 0.0 0.0 0.14 0.0 0.16
0.0 0.0 0.04 0.0 0.13 0.0 0.03 0.0 0.01 0.03 0.0 0.0 0.02 0.0 0.01 0.0 0.27 0.0 0.14 0.0 0.0 0.0

Details

Raw expression values (TPM normalized), Green cells indicate low expression and red high. (Dark gray cells indicate missing values)