Heatmap: Cluster_31 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00002p00127350 (evm_27.TU.AmTr_v1.0_scaffold00002.84)
- - - - 3.58 - - - 3.32 - - - - - - - - - - - - -
AMTR_s00002p00247930 (evm_27.TU.AmTr_v1.0_scaffold00002.337)
- - - - - - - - 2.41 4.06 - - - - - - - - - - - -
AMTR_s00003p00266690 (evm_27.TU.AmTr_v1.0_scaffold00003.379)
- - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00006p00259720 (evm_27.TU.AmTr_v1.0_scaffold00006.219)
- - - - 2.61 - 1.57 0.36 1.25 1.47 0.51 1.34 -2.73 -0.11 0.35 - - - - -2.64 - -
AMTR_s00008p00104070 (evm_27.TU.AmTr_v1.0_scaffold00008.38)
- - - - - - - - - 3.47 - - 2.75 2.07 - - - - - - - -
AMTR_s00011p00266070 (evm_27.TU.AmTr_v1.0_scaffold00011.227)
- - - - - - 2.89 - - 3.87 - - - - - - - - - - - -
AMTR_s00012p00055520 (evm_27.TU.AmTr_v1.0_scaffold00012.16)
- - - - 3.56 - - - 3.36 - - - - - - - - - - - - -
AMTR_s00015p00033830 (evm_27.TU.AmTr_v1.0_scaffold00015.10)
- - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00015p00228480 (evm_27.TU.AmTr_v1.0_scaffold00015.80)
- - - - 0.6 - - - 1.26 3.92 - - - 1.55 - - - - - - - -
AMTR_s00020p00248270 (evm_27.TU.AmTr_v1.0_scaffold00020.121)
- - - - 2.25 - - - - 4.11 - - - - - - - - - - - -
AMTR_s00021p00187050 (evm_27.TU.AmTr_v1.0_scaffold00021.147)
- - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00025p00043160 (evm_27.TU.AmTr_v1.0_scaffold00025.22)
- - - - 3.62 - - - 2.52 - - - - - 2.0 - - - - - - -
AMTR_s00025p00052050 (evm_27.TU.AmTr_v1.0_scaffold00025.27)
- - - - 2.09 - 1.8 - 0.61 1.93 - 2.25 - -0.61 -1.74 1.69 - - - - - -
- - - -0.01 2.68 - 1.8 - 1.07 1.78 - - -0.71 -0.03 1.16 - - - - - - 0.81
AMTR_s00027p00197630 (evm_27.TU.AmTr_v1.0_scaffold00027.64)
- - - - 4.09 - - - - 2.32 - - - - - - - - - - - -
AMTR_s00027p00235280 (evm_27.TU.AmTr_v1.0_scaffold00027.123)
- - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00028p00180650 (evm_27.TU.AmTr_v1.0_scaffold00028.73)
- - - - - - - - - 3.61 - - 2.44 - 2.13 - - - - - - -
AMTR_s00030p00104460 (evm_27.TU.AmTr_v1.0_scaffold00030.48)
- - - - 3.57 - - - - 3.34 - - - - - - - - - - - -
AMTR_s00034p00210170 (evm_27.TU.AmTr_v1.0_scaffold00034.79)
- - - - 0.22 - - - 0.32 4.29 - - - - - - - - - - - -
- - - - 2.31 - 0.97 - 1.51 1.68 - - -2.64 0.29 -0.58 - - - - 0.59 2.45 -
AMTR_s00037p00225180 (evm_27.TU.AmTr_v1.0_scaffold00037.133)
-1.95 -0.17 - - -2.38 - -5.61 - 1.19 3.08 -0.71 -0.21 0.07 -0.04 1.9 - 0.27 - 0.2 -2.43 - -3.04
AMTR_s00039p00051030 (evm_27.TU.AmTr_v1.0_scaffold00039.19)
- - - - 3.56 - - - 3.35 - - - - - - - - - - - - -
AMTR_s00040p00109870 (evm_27.TU.AmTr_v1.0_scaffold00040.79)
- - - - 2.97 - 2.74 - 1.7 1.93 - - - -1.28 - - - - - - - -
AMTR_s00041p00147750 (evm_27.TU.AmTr_v1.0_scaffold00041.103)
- - - - 3.12 - - - 1.18 1.82 - - 2.08 1.7 - - - - - - - -
AMTR_s00041p00216290 (evm_27.TU.AmTr_v1.0_scaffold00041.236)
- - - - - - - - 2.42 4.06 - - - - - - - - - - - -
AMTR_s00041p00233050 (evm_27.TU.AmTr_v1.0_scaffold00041.278)
- - - - 4.17 - - - - 1.98 - - - - - - - - - - - -
AMTR_s00047p00187650 (evm_27.TU.AmTr_v1.0_scaffold00047.116)
- - - - 3.82 - 1.26 - - 2.46 - - - - - - - - - - - -
AMTR_s00052p00070330 (evm_27.TU.AmTr_v1.0_scaffold00052.14)
- - - - 4.02 - - - - 1.44 - - 1.63 - - - - - - - - -
AMTR_s00054p00187350 (evm_27.TU.AmTr_v1.0_scaffold00054.69)
- - - - 4.19 - - - - 1.92 - - - - - - - - - - - -
AMTR_s00057p00164650 (evm_27.TU.AmTr_v1.0_scaffold00057.162)
- - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00060p00101380 (evm_27.TU.AmTr_v1.0_scaffold00060.45)
- - - - 3.57 - - - - 3.34 - - - - - - - - - - - -
AMTR_s00067p00063400 (evm_27.TU.AmTr_v1.0_scaffold00067.39)
- - - - 3.42 - - - - 3.5 - - - - - - - - - - - -
AMTR_s00076p00121100 (evm_27.TU.AmTr_v1.0_scaffold00076.40)
- - - - 1.85 - 2.87 - 1.26 2.41 - - -1.33 -0.41 0.33 - - - - -0.1 - -
AMTR_s00076p00152920 (evm_27.TU.AmTr_v1.0_scaffold00076.50)
- - - - 3.57 - - - 3.34 - - - - - - - - - - - - -
AMTR_s00076p00183220 (evm_27.TU.AmTr_v1.0_scaffold00076.72)
- - - - - - - - - 4.46 - - - - - - - - - - - -
AMTR_s00081p00135650 (evm_27.TU.AmTr_v1.0_scaffold00081.51)
- - - - 3.81 - - - 3.0 - - - - - - - - - - - - -
AMTR_s00091p00084260 (evm_27.TU.AmTr_v1.0_scaffold00091.31)
- - - - - - 3.34 - - 3.57 - - - - - - - - - - - -
AMTR_s00093p00064650 (evm_27.TU.AmTr_v1.0_scaffold00093.15)
- - - - 3.91 - - - 1.8 1.81 - - - - - - - - - - - -
AMTR_s00096p00098260 (evm_27.TU.AmTr_v1.0_scaffold00096.50)
- - - - 2.89 - 1.99 - 0.27 2.98 - - - 0.62 - - - - - - - -
AMTR_s00126p00125800 (evm_27.TU.AmTr_v1.0_scaffold00126.64)
- - - - 1.88 - 1.57 - 0.75 2.61 - - - - 2.53 - - - - - - 0.84
AMTR_s00132p00036820 (evm_27.TU.AmTr_v1.0_scaffold00132.6)
- - - - 3.56 - - - - 3.35 - - - - - - - - - - - -
AMTR_s00169p00047080 (evm_27.TU.AmTr_v1.0_scaffold00169.28)
- - - - 3.54 - - - 1.97 1.94 - - - - 1.4 - - - - - - -
AMTR_s00173p00010570 (evm_27.TU.AmTr_v1.0_scaffold00173.1)
- - - - 2.38 - 1.43 - 1.47 1.9 -0.01 1.77 - -1.33 0.28 - - - 0.42 - - -1.99
AMTR_s00190p00047090 (evm_27.TU.AmTr_v1.0_scaffold00190.19)
- - - - 3.5 - - - - 3.41 - - - - - - - - - - - -
AMTR_s00194p00040050 (evm_27.TU.AmTr_v1.0_scaffold00194.18)
- - - - 3.71 - - - - 3.15 - - - - - - - - - -11.55 - -
AMTR_s00206p00029970 (evm_27.TU.AmTr_v1.0_scaffold00206.5)
- - - - 3.54 - - - - 3.37 - - - - - - - - - - - -
AMTR_s00213p00012540 (evm_27.TU.AmTr_v1.0_scaffold00213.1)
- - - - 3.95 - - - 2.71 - - - - - - - - - - - - -
AMTR_s00224p00028340 (evm_27.TU.AmTr_v1.0_scaffold00224.11)
- - - - 3.72 - - - 1.78 2.42 - - - - - - - - - - - -
AMTR_s01623p00005280 (evm_27.TU.AmTr_v1.0_scaffold01623.1)
- - - - 2.65 - 0.1 - 0.93 3.07 - - -0.04 0.73 - - - - - - - 0.8
AMTR_s03795p00007310 (evm_27.TU.AmTr_v1.0_scaffold03795.2)
- - - - - - - - 3.11 3.74 - - - - - - - - - - - -
AMTR_s04275p00004080 (evm_27.TU.AmTr_v1.0_scaffold04275.2)
- - - - - - - - - 4.46 - - - - - - - - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.