Heatmap: Cluster_70 (HCCA)

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View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Egg apparatus cell (small)
Egg apparatus cell (medium)
Egg apparatus cell (large)
Ovary
Uninuclear microspore
Generative cell
Pollen
Sperm
Pollen tube (bicellular)
Pollen tube (tricellular)
Flower (bud, female)
Flower (bud, male)
Flower (female)
Flower (male)
Flower (tepals)
Fruit (female)
Apical meristem
Shoot (female)
Shoot (male)
Leaf (male)
Leaves
Root (male)
AMTR_s00001p00273030 (evm_27.TU.AmTr_v1.0_scaffold00001.587)
- - - - 3.11 - - - - - 3.52 - -0.27 - 0.08 - - - - - - -
AMTR_s00003p00270620 (evm_27.TU.AmTr_v1.0_scaffold00003.436)
-1.95 - - -1.81 -1.64 - -3.57 - -2.4 -1.91 3.03 -0.17 0.43 0.32 -0.41 -0.21 0.17 0.39 -0.28 1.14 -0.06 -0.12
AMTR_s00012p00056490 (evm_27.TU.AmTr_v1.0_scaffold00012.20)
- - - - 3.11 - - - - -0.79 2.67 - -0.14 -0.08 2.19 - - - - - - -
AMTR_s00013p00114420 (evm_27.TU.AmTr_v1.0_scaffold00013.57)
-2.59 -2.67 -2.44 - -5.29 - -8.99 - -10.45 -7.49 3.49 1.92 -1.48 -5.88 -2.36 -0.93 -2.61 1.65 -0.08 -1.95 -0.91 -1.85
AMTR_s00014p00258050 (evm_27.TU.AmTr_v1.0_scaffold00014.152)
- - - -0.43 2.16 - -0.67 - -1.61 -0.43 3.1 - -0.39 - - - - - 2.22 - - 0.18
- - - - 1.24 - - - - - 2.86 2.86 -1.86 -3.21 -3.68 - 1.78 - - -0.54 - -0.89
AMTR_s00020p00048780 (evm_27.TU.AmTr_v1.0_scaffold00020.19)
- - - 0.13 1.97 - - - - - 3.57 - -1.48 0.55 0.8 - - - - 0.2 - -1.33
AMTR_s00021p00248540 (evm_27.TU.AmTr_v1.0_scaffold00021.275)
- - - - 3.3 - - - -1.79 0.75 3.34 - - -3.17 - - - - - - - -
AMTR_s00024p00253680 (evm_27.TU.AmTr_v1.0_scaffold00024.358)
- - - -0.31 -0.66 - -4.73 -1.32 -3.89 -3.95 2.49 0.32 0.55 0.06 -0.95 -1.17 1.45 0.25 0.73 0.84 0.56 -0.28
AMTR_s00029p00159840 (evm_27.TU.AmTr_v1.0_scaffold00029.193)
-0.71 - - - -1.25 - -3.25 - -1.54 -2.19 2.87 -1.05 0.48 -0.12 0.5 -1.61 2.01 0.35 - 0.6 0.19 -1.03
AMTR_s00029p00160440 (evm_27.TU.AmTr_v1.0_scaffold00029.201)
-1.93 - - -4.18 0.44 -0.14 -2.98 - -1.42 -1.91 2.77 0.86 0.67 -0.2 -1.26 -2.29 1.27 0.08 -0.98 -0.68 1.1 -2.19
AMTR_s00030p00089450 (evm_27.TU.AmTr_v1.0_scaffold00030.36)
- - - - 2.72 - - - - -0.93 3.2 - -0.28 -0.21 1.99 - - - - - - -
AMTR_s00035p00226470 (evm_27.TU.AmTr_v1.0_scaffold00035.54)
0.92 - 0.83 - 0.39 - -4.31 - -3.13 -3.25 3.15 0.38 -1.44 -1.44 -2.85 -1.54 1.5 -0.87 0.21 -2.69 -0.76 -3.44
AMTR_s00040p00205640 (evm_27.TU.AmTr_v1.0_scaffold00040.212)
-3.95 - - -2.83 -2.14 - - - - - 3.6 1.09 -0.38 -4.13 -1.02 -2.29 1.28 -1.91 -1.98 -2.32 -2.07 1.27
AMTR_s00041p00091400 (evm_27.TU.AmTr_v1.0_scaffold00041.58)
- - - - 2.89 - - - -1.05 - 3.57 - -0.59 - -0.89 - - - - 0.08 - -
AMTR_s00044p00147390 (evm_27.TU.AmTr_v1.0_scaffold00044.150)
-0.98 -3.15 -4.84 -0.57 -0.04 - -0.15 -3.03 -0.25 -0.47 2.37 0.82 0.29 0.69 0.62 -0.1 0.03 -0.27 0.28 -1.08 -0.67 -0.48
AMTR_s00046p00195170 (evm_27.TU.AmTr_v1.0_scaffold00046.118)
- - - - -2.45 - - - - - 4.04 - 1.99 -2.45 -1.16 - - - - - - -0.37
AMTR_s00049p00012970 (evm_27.TU.AmTr_v1.0_scaffold00049.3)
- - - - 2.62 - -1.78 - -0.98 -0.74 2.79 - -0.62 -3.4 -1.25 0.76 - - - -1.2 1.98 -1.56
AMTR_s00050p00220790 (evm_27.TU.AmTr_v1.0_scaffold00050.86)
- - - - 3.49 - -0.59 - -0.45 - 2.57 - - -0.51 1.44 - - - - - - -
- - - - 2.73 - -1.69 - -1.27 -0.46 2.19 0.33 0.85 -2.55 -0.32 -0.23 -0.17 1.14 -0.84 -1.49 - -1.13
- - - - 3.39 - -2.2 - -3.13 -1.72 2.31 1.38 -0.05 -1.11 0.38 - - - - -1.29 - -2.33
AMTR_s00058p00097860 (evm_27.TU.AmTr_v1.0_scaffold00058.53)
- - - - - - - - - - 4.11 - 2.23 - - - - - - - - -
AMTR_s00060p00126750 (evm_27.TU.AmTr_v1.0_scaffold00060.65)
- - - - 2.2 - - - -0.61 - 2.43 - -0.27 0.35 2.12 - 1.32 - - 1.26 - -
- - - - 0.52 - - - -0.96 - 3.32 - -0.53 -2.01 1.13 - - 2.68 - - - -0.96
AMTR_s00067p00189730 (evm_27.TU.AmTr_v1.0_scaffold00067.204)
- - - - -2.64 - -6.29 - - - 3.52 - 0.3 2.97 -2.99 - -0.08 -1.96 - - - -
AMTR_s00069p00014970 (evm_27.TU.AmTr_v1.0_scaffold00069.1)
- - - - 0.93 - - - -3.42 -4.32 3.24 - 0.14 -1.27 -1.5 - 1.27 1.36 0.47 -0.68 0.06 -0.72
AMTR_s00070p00002210 (evm_27.TU.AmTr_v1.0_scaffold00070.1)
- - - - 0.82 - - - 0.18 -1.22 2.65 1.6 0.09 -1.32 1.09 - 1.5 - -0.75 -0.74 - 0.81
AMTR_s00074p00108300 (evm_27.TU.AmTr_v1.0_scaffold00074.30)
- - - - 1.88 - - 1.57 - - 3.94 - - - - - - - - - - -
AMTR_s00078p00129630 (evm_27.TU.AmTr_v1.0_scaffold00078.107)
-1.9 -1.47 0.15 - 0.91 -0.31 -1.97 -0.49 -2.35 -2.0 1.91 0.27 -0.04 -0.6 -0.36 -0.4 0.87 0.84 0.98 -0.28 -0.13 -0.51
- - - - 3.31 - - - - - 3.59 - - - - - - - - - - -
AMTR_s00086p00038650 (evm_27.TU.AmTr_v1.0_scaffold00086.17)
- - - - -1.57 - - - -2.25 -1.78 3.05 1.21 -0.91 -2.14 -1.01 - -0.77 1.02 0.04 -2.2 2.44 -
AMTR_s00086p00057580 (evm_27.TU.AmTr_v1.0_scaffold00086.23)
-4.16 -2.74 - - -3.37 - -1.73 - -1.15 -1.52 3.19 0.5 0.36 -0.03 -1.03 -1.48 1.41 0.35 0.28 -0.5 -0.6 -1.26
- - - - 3.63 - - - - - 3.0 - - - -1.21 - - - - - - 0.21
AMTR_s00090p00174240 (evm_27.TU.AmTr_v1.0_scaffold00090.106)
- - - - 3.5 - -0.67 - -3.37 - 3.12 - - - 0.38 - - - - - - -
AMTR_s00091p00055060 (evm_27.TU.AmTr_v1.0_scaffold00091.12)
- - - 0.16 1.49 - - - - - 3.93 - - - 1.47 - - - - - - -
- - - -3.01 1.41 - -1.83 - - -2.31 3.16 - -0.38 -1.5 -1.09 -0.03 0.76 0.35 -0.48 0.07 1.24 -3.24
- - - - - - - -1.65 - - 4.05 1.59 -0.35 - 0.15 - - - - - - -2.65
AMTR_s00096p00169300 (evm_27.TU.AmTr_v1.0_scaffold00096.114)
- - - - 2.93 - - - - 2.06 3.23 - - -0.17 - - - - - - - -
AMTR_s00108p00119250 (evm_27.TU.AmTr_v1.0_scaffold00108.32)
- - - - 1.96 - - - -1.66 -2.42 2.77 - -2.49 -1.55 - - 1.46 1.67 0.51 - 1.52 -
AMTR_s00112p00048590 (evm_27.TU.AmTr_v1.0_scaffold00112.12)
- - - - 3.22 - -3.35 - -2.54 -1.84 1.79 - 0.38 -2.56 -0.07 - -0.9 - - -1.94 2.32 -1.06
AMTR_s00117p00079990 (evm_27.TU.AmTr_v1.0_scaffold00117.22)
- - - - -0.22 - -2.15 - - - 4.06 - -0.88 0.73 1.02 - - - - - - -
AMTR_s00126p00127750 (evm_27.TU.AmTr_v1.0_scaffold00126.67)
- - - - 2.84 - 0.08 - - - 3.71 - - -0.49 - - - - - - - -
- - - - 0.48 - - - - - 3.35 - 2.38 1.92 0.12 - - - - - - -1.47
AMTR_s00129p00103960 (evm_27.TU.AmTr_v1.0_scaffold00129.82)
- - - -0.59 2.36 - - - - - 3.77 - - - - - - - - 1.36 - -
AMTR_s00142p00106070 (evm_27.TU.AmTr_v1.0_scaffold00142.70)
- - - - 2.8 - - - - - 2.15 - -0.0 - 1.15 2.46 0.89 - - - - -
AMTR_s00145p00026210 (evm_27.TU.AmTr_v1.0_scaffold00145.6)
-1.85 -1.21 - -5.01 1.94 - -3.12 0.22 -2.11 -2.87 2.33 -0.78 -1.55 -1.33 -2.41 - 1.42 0.03 -1.13 -0.38 1.99 -1.58
AMTR_s00145p00034190 (evm_27.TU.AmTr_v1.0_scaffold00145.9)
- - - -3.88 2.19 - -4.77 - -2.46 -2.23 2.72 0.25 -0.51 -0.93 -0.71 - 0.53 0.06 -1.92 -1.39 1.91 -1.1
AMTR_s00152p00086560 (evm_27.TU.AmTr_v1.0_scaffold00152.31)
- - - - -0.93 - - - - - 4.17 - 0.62 - - - - - - 0.04 - -0.15
AMTR_s00153p00050510 (evm_27.TU.AmTr_v1.0_scaffold00153.21)
- - 1.16 -4.65 -1.21 - -2.86 - -0.99 -1.78 2.5 0.99 0.2 -1.01 -0.54 0.43 -0.99 0.8 0.98 -0.77 0.64 -0.59
AMTR_s00556p00009750 (evm_27.TU.AmTr_v1.0_scaffold00556.2)
-2.35 - - 1.06 0.07 - - - -4.25 - 2.84 - -0.18 -0.86 -1.67 -0.58 -0.99 1.38 0.78 0.06 1.64 -3.84
AMTR_s01142p00007160 (evm_27.TU.AmTr_v1.0_scaffold01142.1)
- 0.17 - - -1.85 - -2.84 -1.91 -2.92 -2.97 2.94 0.23 -1.25 -1.0 -1.42 -1.92 1.01 -1.54 -0.57 -1.62 2.39 -0.06
AMTR_s01345p00008380 (evm_27.TU.AmTr_v1.0_scaffold01345.2)
- - - - 2.23 - - - - - 4.11 - - -21.4 - - - - - - - -
- - -1.12 - 2.28 - - - - - 2.92 - - - - - - 3.19 - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.