Heatmap: Cluster_446 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc02g090545.1.1 (Solyc02g090545.1)
2.9 -2.42 -0.65 -1.45 -1.84 -0.1 -2.28 -2.79 1.37 1.11 0.45 0.96 -5.24 -5.03 - - - - - -5.03 -0.98 -0.29 1.83 0.72 -0.24 -0.69 0.2 -0.02 -0.4 -1.98 -0.86 -0.81 - 1.75
Solyc03g093450.3.1 (Solyc03g093450.3)
1.22 -6.14 0.19 -2.12 -1.2 0.73 -1.04 -0.44 1.12 1.25 -0.63 0.57 1.3 1.36 0.19 0.39 0.38 -6.82 -5.37 -0.35 -0.53 -0.92 0.5 -0.33 -1.07 0.75 -0.03 -0.28 -0.68 -1.18 -0.48 -1.98 -1.64 -0.1

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.