Heatmap: Cluster_223 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc00g033860.2.1 (Solyc00g033860.2)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc00g033870.2.1 (Solyc00g033870.2)
- - - - - - - - - - - - - - - - - - - - - - 5.09 - - - - - - - - - - -
Solyc00g033880.1.1 (Solyc00g033880.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc00g033885.1.1 (Solyc00g033885.1)
- - - - - - - - - - - 5.09 - - - - - - - - - - - - - - - - - - - - - -
Solyc01g005340.3.1 (Solyc01g005340.3)
0.69 -1.42 0.04 0.28 0.31 -0.04 -0.76 -1.47 0.47 0.51 -0.06 -0.18 0.04 -0.65 0.07 -0.05 -0.05 - - 0.87 1.08 -0.19 -0.71 -0.33 -0.31 1.49 -0.81 -0.22 -0.16 -0.11 -0.16 0.21 -1.94 0.92
Solyc01g057680.3.1 (Solyc01g057680.3)
1.39 - - - - 1.72 - - 1.54 2.4 -1.66 -3.14 2.07 1.9 -1.13 -4.94 -2.39 - - 2.45 -2.94 -5.99 - - -5.6 2.34 - -7.27 -5.16 - - -6.25 -4.62 -3.54
Solyc01g057910.3.1 (Solyc01g057910.3)
2.11 -6.0 -3.02 -7.25 -2.1 0.76 -5.84 -2.25 -0.78 -0.74 1.55 2.22 -1.22 -1.76 -0.5 -0.67 -0.07 -7.22 -7.34 0.21 0.61 -1.58 -3.41 -2.27 -1.92 0.04 -3.35 -2.34 -2.29 -1.42 -1.38 0.95 -2.55 2.93
Solyc01g073720.2.1 (Solyc01g073720.2)
3.48 -4.94 2.65 -2.03 -6.56 0.96 - -6.01 -2.0 -0.6 -4.91 -3.06 -3.67 -0.99 -0.5 -2.92 -0.94 - - -7.08 -6.53 -5.25 -3.0 -3.29 -4.96 -3.09 -3.09 -3.51 -1.58 -4.45 -3.89 -5.04 -0.55 3.25
Solyc02g021190.2.1 (Solyc02g021190.2)
- - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
Solyc02g036220.1.1 (Solyc02g036220.1)
-1.48 - - - - 4.89 - - - -0.13 - -2.28 - - 1.02 - -1.92 - - - - - - -5.35 - - - - - - - - - -1.08
Solyc02g068660.2.1 (Solyc02g068660.2)
1.62 - 0.48 -3.9 0.86 0.88 0.47 -0.59 1.82 0.07 -0.72 2.55 -4.49 -0.01 -0.83 0.5 -0.02 -3.86 -4.72 -1.83 -1.66 -2.27 0.75 -1.12 -4.94 -0.9 -1.44 -2.96 -3.13 -4.18 -0.65 -6.91 1.03 0.81
Solyc02g072210.1.1 (Solyc02g072210.1)
2.11 -6.91 0.52 -6.66 0.54 0.23 -9.7 -4.02 -1.86 -0.45 0.53 1.0 0.26 1.09 0.99 1.65 2.25 - - -1.19 -2.1 -2.9 -2.59 -2.44 -4.94 -0.82 -3.82 -3.37 -2.81 -4.92 -2.5 -2.15 -4.22 2.41
Solyc02g077070.3.1 (Solyc02g077070.3)
3.63 - -0.91 - -1.15 1.41 - -0.87 -0.48 -0.26 -1.86 -3.87 - - 0.75 - -3.8 - - 1.3 - -4.52 - -6.03 -3.32 2.47 - -5.97 - - - -4.03 0.49 2.06
Solyc02g077350.1.1 (Solyc02g077350.1)
0.61 0.24 - -0.65 1.73 0.71 - - 0.01 -0.83 -0.37 0.57 -1.87 - 2.15 - -1.38 3.34 -0.91 -1.67 -1.83 - - -3.81 -4.93 0.39 -0.79 -1.7 -2.02 -3.43 -1.68 -1.49 -4.72 1.12
Solyc02g078650.3.1 (Solyc02g078650.3)
1.8 2.56 3.15 3.29 -3.42 -0.61 -12.27 -9.79 -2.25 -2.21 -10.27 -6.57 -12.74 - -2.4 -9.78 -7.35 - -13.56 -8.97 -9.14 -9.93 -9.07 -8.42 -7.93 -3.24 -10.3 -10.14 -9.41 -8.64 -9.81 -7.59 -9.91 2.16
Solyc02g085005.1.1 (Solyc02g085005.1)
2.46 0.21 -2.38 -0.71 -1.76 1.29 -4.5 -2.03 2.95 1.08 -2.74 0.56 -1.87 -1.14 -2.39 -3.69 -1.09 - - 0.38 1.72 -3.35 -5.0 -1.93 -1.58 -0.28 -3.97 -4.67 -3.3 -5.67 -5.83 -3.75 0.33 1.52
Solyc02g091430.3.1 (Solyc02g091430.3)
0.29 -0.89 -0.35 -0.26 -0.48 -0.11 -0.98 -1.22 0.2 0.54 -0.23 -0.48 -0.11 -0.39 -0.05 -0.17 -0.07 -3.44 0.71 0.6 1.08 0.06 -0.66 0.0 0.22 1.27 -0.81 -0.53 -0.4 -0.42 -0.36 0.12 -0.57 1.29
Solyc04g008100.2.1 (Solyc04g008100.2)
3.35 -7.23 2.15 -0.14 -3.8 -0.47 - - -8.1 -2.49 0.24 -0.01 -2.05 -0.79 -3.38 -4.37 -2.67 - - -0.95 -3.5 -2.29 -0.29 -1.08 -3.9 -2.67 -4.47 -4.77 -4.72 -9.4 -3.06 -4.25 -6.02 3.53
Solyc04g071605.1.1 (Solyc04g071605.1)
1.15 -3.27 1.25 - -0.5 0.78 - -2.26 -3.17 2.92 - -2.81 - - 2.38 1.89 2.79 - - -1.46 -3.38 - - -5.7 - -4.23 -4.1 -5.6 -2.66 - -4.12 - - 1.12
Solyc05g007940.3.1 (Solyc05g007940.3)
1.44 2.25 1.91 2.13 -0.9 1.26 - -0.17 0.55 0.98 -3.3 -4.63 -6.54 -6.47 1.22 -1.15 -0.94 -3.95 - -3.13 0.05 -1.63 -1.69 -1.96 -2.69 -0.15 -2.95 -2.15 -1.36 -1.33 -1.33 -1.42 -1.48 1.16
Solyc05g010720.3.1 (Solyc05g010720.3)
0.77 -2.89 -2.93 -0.3 -1.96 1.07 -0.67 -1.99 1.0 -0.22 -2.43 0.23 -1.2 -1.47 1.21 0.98 1.16 -5.49 -5.63 0.93 1.41 -1.05 -1.78 -1.05 -0.08 0.51 -1.96 -0.33 1.21 -0.67 -1.03 0.06 -0.62 1.03
Solyc05g055370.1.1 (Solyc05g055370.1)
0.94 - 1.26 0.79 - 1.57 - - -0.42 - -0.08 1.08 0.38 -1.9 - -2.47 0.09 - - -1.58 - - - -3.01 -2.42 1.41 -3.06 -2.13 - - -0.78 -2.54 - 3.8
Solyc06g008100.3.1 (Solyc06g008100.3)
-0.95 -1.05 -0.05 -2.08 -2.31 1.27 -2.79 -0.1 -0.27 2.05 -0.28 1.62 0.16 0.44 2.24 1.06 1.71 - - -5.89 - -1.86 -1.87 -1.71 -3.57 - -2.75 -1.79 -1.49 -1.19 -1.68 0.18 1.11 -0.18
Solyc06g059860.3.1 (Solyc06g059860.3)
1.15 -2.05 0.01 -2.0 1.29 1.53 -4.87 -1.11 0.03 1.42 -0.84 -0.37 -0.49 -1.34 0.28 0.41 1.14 - - 0.92 -0.03 -2.69 -2.56 -1.78 -1.73 0.22 -3.84 -3.28 -2.96 -3.59 -3.11 -1.94 -1.79 2.92
Solyc06g061210.3.1 (Solyc06g061210.3)
1.7 3.85 -2.76 3.47 -2.79 0.29 - - - - - -4.15 - - -4.57 - - - - - - - - - - - - - - - - - - 1.84
Solyc06g076490.3.1 (Solyc06g076490.3)
0.59 -0.45 1.83 -0.95 1.17 0.74 -1.67 0.37 0.68 -0.26 0.22 -0.53 -0.46 -0.8 0.19 -0.51 0.1 - -11.27 -0.64 0.47 -0.74 -0.74 -0.35 -0.72 0.4 -1.09 -0.55 -0.63 -0.69 -0.88 -0.65 -0.75 1.81
Solyc07g041650.2.1 (Solyc07g041650.2)
-1.34 -2.78 -4.18 -4.27 - 0.43 -2.1 - -1.62 - - - - -3.72 -3.5 - - 3.96 - -4.05 -4.38 -0.06 -3.07 -1.83 -0.71 - 0.43 1.55 1.69 1.58 1.43 -1.59 - -2.84
Solyc07g045000.3.1 (Solyc07g045000.3)
3.42 -3.52 -0.73 -3.43 -1.54 1.85 -7.15 -3.21 -1.15 1.07 -0.76 -4.13 -5.72 - 1.63 1.37 2.43 - - -6.91 -6.41 - - -7.12 - -4.59 - -8.67 -7.98 -6.06 - -6.7 -5.35 2.01
Solyc07g056280.3.1 (Solyc07g056280.3)
2.79 -3.78 -4.61 -7.02 -1.78 1.16 -5.52 -3.77 -0.3 0.51 -2.47 -2.09 -3.05 -1.66 2.55 1.75 2.46 - - -1.53 -0.49 -5.21 -4.27 -3.65 -3.8 -0.27 -2.88 -2.96 -2.62 -3.7 -3.65 -2.84 -1.72 1.76
Solyc07g066330.3.1 (Solyc07g066330.3)
3.38 -5.74 -0.4 -3.15 -3.01 0.64 - - -2.61 2.14 0.81 -0.74 0.65 -0.22 0.59 -0.68 2.69 - - -2.62 -5.02 -5.69 - -5.63 -7.49 -0.45 -8.17 -6.7 -5.82 -5.58 -5.31 -3.65 -1.8 0.72
Solyc08g076870.1.1 (Solyc08g076870.1)
2.01 -1.61 1.0 1.17 1.41 0.84 -1.77 -0.74 0.21 1.49 -1.25 -2.23 1.42 0.86 -0.4 -1.08 -0.36 -2.84 -2.64 -2.77 -1.48 -3.83 -4.33 -4.26 -5.01 -3.3 -3.51 -3.98 -4.11 -3.9 -3.32 -3.27 -2.66 2.84
Solyc09g014900.3.1 (Solyc09g014900.3)
1.74 -2.63 1.03 -1.31 0.25 0.6 -0.66 -0.97 0.99 -0.06 -0.12 0.52 -0.55 -0.53 0.32 -0.14 -0.02 - -9.41 -0.01 0.6 -1.42 -1.75 -1.49 -0.79 2.33 -0.68 -0.77 -0.83 -1.25 -1.14 -0.63 -1.87 0.74
Solyc09g014910.3.1 (Solyc09g014910.3)
2.65 - - -4.77 -4.15 2.92 - -4.76 -5.57 1.48 -3.04 -3.65 - -4.49 3.22 -1.28 -1.06 - - -1.49 - - - - - 0.91 - - - - - -5.51 - 2.17
Solyc09g092600.3.1 (Solyc09g092600.3)
0.83 - - - -2.83 3.55 - 0.05 2.03 0.73 -4.85 -5.11 - -3.86 2.16 0.39 0.15 - - -7.02 -2.52 -2.21 0.45 -0.6 -0.99 -5.59 - -6.35 -4.84 - -3.13 - 0.15 1.24
Solyc09g098160.3.1 (Solyc09g098160.3)
2.06 -6.39 1.79 -2.3 -0.86 0.17 -7.45 -0.3 -0.67 -0.78 -1.08 -2.14 1.11 1.02 0.29 0.39 0.82 -7.32 -10.5 -3.14 1.07 -1.12 -0.25 -0.97 -1.02 -0.94 0.28 0.01 -0.33 -1.05 -0.51 1.07 -3.68 0.88
Solyc10g018120.2.1 (Solyc10g018120.2)
-0.05 - -2.67 -6.11 -4.84 0.69 - -1.68 -1.08 3.25 1.89 0.88 -1.9 -2.68 0.54 1.01 0.96 - - 0.87 -0.4 -4.68 -7.24 -4.52 -3.83 2.28 -8.27 -6.12 -5.63 -4.28 -5.17 -2.48 -2.36 0.5
Solyc10g024490.2.1 (Solyc10g024490.2)
2.39 -0.58 2.95 2.62 -3.76 0.73 - -3.43 -3.26 -1.5 -5.49 -2.07 -2.55 -4.4 -4.11 -6.88 -4.6 - - -1.38 0.43 -1.03 -3.04 -1.94 -1.78 0.68 -2.04 -1.32 -0.67 -0.45 -0.73 -0.02 -3.94 1.66
Solyc10g062160.2.1 (Solyc10g062160.2)
1.21 -3.3 -2.37 -5.43 -1.52 0.73 -1.1 -3.35 0.69 0.91 -0.82 -1.65 -0.05 0.45 2.37 1.78 2.15 1.32 -8.97 -1.26 -0.73 -2.34 -2.48 -2.66 -3.16 0.76 -1.84 -2.18 -1.9 -2.4 -2.18 -1.83 -3.48 0.72
Solyc11g005480.2.1 (Solyc11g005480.2)
-1.38 - - - 4.33 3.12 - - -6.33 -2.34 -5.81 -3.87 -1.79 -3.66 -2.23 -3.47 -1.07 - -6.48 -0.48 0.27 - - -6.15 -4.08 -0.84 -6.35 -6.0 -4.28 -8.31 - -3.41 -7.54 -0.58
Solyc11g067170.2.1 (Solyc11g067170.2)
0.17 -7.1 -2.1 -6.96 -1.28 0.91 -5.48 -0.13 0.81 -0.08 -2.43 -2.04 -3.69 -4.59 1.36 0.18 2.25 -6.19 - -1.36 -4.07 -0.65 -0.99 -0.9 -1.85 0.38 2.03 1.0 0.44 0.53 0.29 -2.11 -1.66 1.73
Solyc12g006280.2.1 (Solyc12g006280.2)
-2.29 - -4.29 - 1.15 3.06 -5.73 -1.94 0.95 0.71 -2.62 -5.52 -0.65 -5.05 2.43 -0.13 3.17 - - - - - - -6.22 -7.01 - - -7.97 -6.77 - - - -3.59 1.62
Solyc12g009130.2.1 (Solyc12g009130.2)
0.81 - - - -1.4 0.86 - - -1.73 2.47 -1.99 0.33 - -2.87 0.36 1.16 0.82 - - 0.67 - -4.47 -3.95 -2.62 - 0.19 - - - -1.58 -1.85 -1.38 - 3.73
Solyc12g011440.2.1 (Solyc12g011440.2)
0.63 -3.67 1.19 -0.5 -0.73 -0.5 -0.74 -1.28 -0.93 -0.12 0.4 0.7 0.8 0.92 -0.16 -0.29 -0.31 -8.02 -8.54 0.73 1.19 -0.49 -1.15 -0.75 -0.62 1.15 -0.3 -0.01 0.03 -0.25 -0.5 -0.37 0.77 0.13
Solyc12g013830.2.1 (Solyc12g013830.2)
-2.12 - - - - 1.02 - -5.58 - 3.17 -0.13 -0.92 -2.48 -4.85 1.48 2.03 2.23 - - -2.17 - - - - -7.92 3.16 - -9.1 - - - - -1.61 -5.57
Solyc12g042210.2.1 (Solyc12g042210.2)
1.85 - -0.17 - 1.97 1.76 -2.18 -0.93 1.21 2.2 0.07 0.63 -2.22 - - 0.23 -2.38 - - -2.08 -0.41 -3.88 -1.81 -3.19 -2.69 - -4.53 -4.32 -3.4 - -3.99 0.1 1.91 1.9
Solyc12g042380.2.1 (Solyc12g042380.2)
1.67 -0.48 -4.38 -1.75 1.24 -0.18 -1.87 -1.51 -1.06 0.31 -0.9 -0.74 0.09 -0.48 -0.54 -0.56 -0.08 -4.17 -5.08 0.47 0.92 -0.47 -1.14 -0.51 0.04 1.93 -1.18 -0.71 0.41 -0.7 -0.82 0.27 -1.76 1.92
Solyc12g042965.1.1 (Solyc12g042965.1)
- - - - - - - - - - - - - - - - - - - - - - - - - - 3.93 3.71 2.5 - - - - -

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.