Heatmap: Cluster_170 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g009000.3.1 (Solyc01g009000.3)
0.48 -1.32 0.5 -1.24 0.27 -0.41 0.03 -1.21 -0.3 -0.47 -0.1 0.26 0.42 0.33 -0.76 -1.12 -0.95 -6.37 -6.58 -0.1 0.22 0.22 0.32 0.17 0.2 0.15 0.89 0.77 0.49 0.6 0.44 0.17 -0.68 0.69
Solyc01g058670.3.1 (Solyc01g058670.3)
-0.2 -2.21 0.24 0.7 0.05 -2.04 -0.69 -1.52 -0.45 -0.54 -1.19 -1.81 -0.92 -0.76 0.67 -0.53 0.03 -5.21 -5.41 -0.67 0.34 0.74 -0.9 0.19 0.32 -0.37 0.84 1.13 0.8 1.31 0.97 1.01 -1.61 0.57
Solyc01g080910.2.1 (Solyc01g080910.2)
-2.05 -4.87 -5.33 -6.44 -4.36 -3.2 -2.28 -3.79 -1.21 -1.64 -0.17 1.72 1.4 1.46 -4.3 -5.48 -4.91 - - -0.45 1.89 0.64 -0.25 0.06 0.32 -1.67 0.9 1.22 1.41 1.11 0.74 1.36 -4.1 -4.21
Solyc01g096040.3.1 (Solyc01g096040.3)
-1.48 -2.62 -1.76 -0.28 -1.7 -1.43 -1.1 -0.96 -0.95 0.02 1.07 0.02 1.14 -0.53 -1.03 -1.3 0.2 -12.98 -13.58 -0.58 0.4 0.8 -0.48 0.3 0.32 -1.16 1.08 1.07 0.87 1.26 1.33 1.08 -1.68 -1.39
Solyc01g098645.1.1 (Solyc01g098645.1)
-0.33 -4.71 0.62 -1.49 -0.09 -1.36 -3.33 -1.12 -0.96 -0.8 -1.7 -3.07 -2.73 -3.13 -1.38 -2.52 -1.9 -9.33 -8.38 -0.33 -0.36 1.28 -0.35 0.58 1.05 -0.06 0.53 0.97 1.36 1.68 1.29 1.96 -0.61 0.39
Solyc01g103120.3.1 (Solyc01g103120.3)
-3.22 -3.95 -5.02 -3.3 -2.89 -2.47 -3.05 -2.43 -0.62 0.78 -2.52 -2.8 -2.22 -3.1 -0.27 0.05 -0.52 0.48 -1.66 -0.05 0.73 0.81 0.79 0.92 1.02 0.43 1.65 1.49 1.03 1.28 0.97 0.88 -5.09 -2.65
Solyc01g105350.2.1 (Solyc01g105350.2)
-2.24 -4.55 1.34 1.22 -3.33 -1.86 -7.86 -4.67 -2.82 -5.7 -8.65 - -5.77 -6.65 - -6.28 -7.94 - -10.73 -3.46 -3.63 1.51 -1.97 -0.31 0.33 -5.71 1.56 1.92 1.48 2.12 1.48 2.6 -7.29 -2.88
Solyc01g107800.3.1 (Solyc01g107800.3)
-0.97 -2.92 -0.23 -2.12 -0.66 -2.41 0.32 -1.4 0.1 -1.82 -1.67 -1.12 -0.11 -0.76 -0.91 -1.8 -1.19 -11.05 -12.56 -2.17 1.07 1.33 0.77 1.08 1.04 -1.22 0.62 0.84 0.57 1.25 1.13 1.27 -2.54 0.87
Solyc01g109880.3.1 (Solyc01g109880.3)
-2.52 -2.84 -2.45 -1.14 -2.83 -2.49 -3.72 -3.06 -0.12 0.21 0.05 -0.45 -1.06 -1.79 -0.37 -0.49 -0.42 -12.26 -13.16 0.38 0.86 0.95 -0.64 0.01 0.62 0.74 1.14 1.19 1.6 1.38 0.95 1.75 -6.36 -1.43
Solyc02g064795.1.1 (Solyc02g064795.1)
-2.59 -2.81 -6.21 -7.66 -4.78 -3.63 -4.2 -4.73 -1.48 0.24 1.07 0.12 -0.28 -0.34 0.71 0.5 0.43 -2.71 -1.55 -1.84 -0.62 1.4 -0.19 0.46 0.59 -0.64 0.7 0.8 0.68 1.67 1.66 1.53 -5.17 -4.23
Solyc02g067380.3.1 (Solyc02g067380.3)
-5.41 -2.69 -6.08 -6.25 - -2.58 -4.05 -0.92 -0.74 -1.51 -5.36 -3.17 -2.45 -1.47 -5.73 - -5.67 -7.75 - - -3.79 1.26 1.34 1.45 1.63 - 1.98 2.13 2.21 1.52 1.45 0.36 -0.83 -2.58
Solyc02g078620.1.1 (Solyc02g078620.1)
-2.94 -6.48 -0.74 -0.27 1.43 -1.68 - -1.98 -1.93 -2.94 -3.7 -3.17 -5.23 -5.19 1.03 -0.35 -0.43 - -8.52 - -2.87 1.23 0.59 0.71 0.91 - 1.17 1.59 2.01 1.53 0.5 1.58 -0.93 -1.51
Solyc02g080165.1.1 (Solyc02g080165.1)
-0.93 0.33 -2.03 -2.42 0.43 -0.41 0.43 -0.31 -0.58 0.18 0.24 0.07 0.41 0.35 -0.4 -1.06 -1.26 - - -1.34 -1.33 0.89 0.92 0.48 0.26 -0.61 0.96 0.53 0.46 0.94 1.25 0.63 -1.05 -1.5
Solyc02g087840.3.1 (Solyc02g087840.3)
-2.43 -7.04 -1.81 2.0 1.63 -3.61 -9.77 -3.44 -1.23 -1.11 -7.36 -6.05 -4.75 -6.19 -1.58 -0.57 -1.22 -10.77 -11.63 -5.24 1.03 1.02 -2.28 0.09 1.21 -3.52 0.58 1.44 1.67 1.5 0.82 1.82 -4.7 -0.92
Solyc02g088380.3.1 (Solyc02g088380.3)
-6.47 -10.04 -7.48 -6.99 -8.9 -8.61 - - 0.05 -8.34 -3.62 -5.7 -4.51 -2.63 -6.78 -5.52 -5.63 -6.67 -7.49 -2.42 -0.97 1.55 -1.57 0.77 1.8 -1.57 1.27 1.92 1.83 2.19 1.46 2.59 -9.42 -8.05
Solyc02g092045.1.1 (Solyc02g092045.1)
-3.39 - - -1.1 -2.29 -4.09 - -2.89 -2.86 0.08 - - -1.15 -3.89 - - -2.25 - -3.01 - 0.08 1.14 -1.54 0.31 0.61 - 1.04 2.34 2.12 2.6 1.18 2.18 -4.28 -1.83
Solyc03g031800.3.1 (Solyc03g031800.3)
-2.81 -3.31 0.27 1.8 -0.94 -3.57 -4.13 -1.62 -2.34 -2.64 -2.89 -3.03 -4.78 -2.0 -1.35 -2.55 -4.02 -13.82 -14.24 -6.87 -1.46 1.35 -0.96 0.71 1.27 -8.79 1.07 1.89 1.89 1.63 1.09 1.95 -3.61 -1.37
Solyc03g065340.3.1 (Solyc03g065340.3)
-0.74 -1.07 -0.94 -0.1 -0.25 -0.93 -1.21 -0.84 -0.39 -0.77 -0.63 -0.61 -0.64 -0.93 -0.56 -1.34 -1.08 -6.44 -7.58 -1.04 1.26 0.95 0.26 0.89 1.11 -1.04 0.48 1.19 1.41 1.01 0.73 1.27 -3.48 -0.52
Solyc03g071533.1.1 (Solyc03g071533.1)
-2.63 -1.56 -2.48 -2.16 -3.95 -2.79 -0.69 -2.18 -1.21 -0.17 -0.62 -0.79 -0.2 -0.82 1.24 0.34 0.3 -4.34 -4.96 -4.35 -0.92 1.46 0.54 0.54 0.68 -3.43 0.93 1.06 0.96 1.79 1.77 1.18 -5.91 -3.26
Solyc03g120420.3.1 (Solyc03g120420.3)
-2.58 -8.71 -8.36 -8.12 -5.99 -5.73 -7.23 -10.26 -2.17 -3.65 -4.63 -7.29 -2.95 -4.75 -5.67 -6.22 -6.62 -8.08 -10.28 1.9 3.06 0.45 -2.71 -0.35 -0.38 1.37 0.83 2.12 1.88 1.38 0.6 0.54 -8.38 -3.27
Solyc04g006970.3.1 (Solyc04g006970.3)
-2.79 -5.66 -4.29 -5.65 -5.16 -3.17 -3.31 -5.43 -2.29 -2.33 -1.15 -2.19 -1.69 -2.3 -5.4 -6.44 -5.94 -3.63 -4.45 -1.82 0.96 1.59 0.0 1.1 1.4 -0.88 1.42 1.91 1.77 1.78 1.46 1.99 -9.99 -2.57
Solyc04g074165.1.1 (Solyc04g074165.1)
-0.68 -1.18 -0.35 0.99 0.08 -2.11 -1.61 -0.49 -0.61 -0.92 -2.3 -2.39 -1.62 -2.45 -0.12 -1.7 -1.4 -8.66 - -4.68 -2.55 0.98 -0.1 0.54 0.84 -3.45 1.62 1.6 1.37 1.73 1.19 1.17 -1.39 -0.36
Solyc04g081250.1.1 (Solyc04g081250.1)
-2.35 -2.91 0.93 1.36 -3.75 -4.43 -2.39 -2.39 -0.57 -1.21 1.83 0.88 -2.24 -1.47 0.36 -0.67 -1.07 -0.92 -2.36 -2.12 0.39 1.26 -0.92 0.32 0.75 -4.34 -0.28 0.09 -0.29 1.7 1.25 1.34 -6.71 -2.36
Solyc05g053860.3.1 (Solyc05g053860.3)
-3.44 - -1.8 -1.38 -9.67 -12.06 -8.09 - -9.86 -6.14 -0.12 -0.36 -6.09 -5.3 -6.93 -8.71 -10.51 - - 0.87 2.37 0.81 -0.31 0.61 1.34 -0.15 1.71 1.94 1.86 1.02 0.76 1.3 - -4.36
Solyc06g007215.1.1 (Solyc06g007215.1)
-2.61 -1.88 -4.77 -1.45 -2.96 -3.98 -1.4 -5.98 -3.36 -1.36 -1.25 0.12 0.32 0.19 -1.18 -0.43 -1.18 - - -2.58 -5.32 1.69 0.36 0.76 1.2 -3.18 0.59 1.11 1.23 1.61 1.67 2.36 -4.05 -1.66
Solyc06g035970.3.1 (Solyc06g035970.3)
-0.04 -1.59 0.26 0.19 0.35 -0.94 -1.12 -0.82 -0.51 -0.47 -0.7 -1.66 -1.27 -1.57 0.15 0.3 -0.22 -10.92 -12.57 -0.31 0.61 0.39 -0.23 0.49 0.73 0.14 0.79 0.96 0.95 0.59 0.36 0.49 0.69 0.18
Solyc06g063295.1.1 (Solyc06g063295.1)
0.23 -1.91 -1.96 -2.69 -0.58 -0.54 0.66 -1.3 0.04 -0.35 0.4 0.29 1.49 1.38 -1.57 -2.58 -2.42 - -10.63 -0.27 -0.14 0.52 0.34 0.23 0.06 0.41 0.73 0.72 0.58 0.49 0.46 0.05 -1.06 0.33
Solyc06g068870.3.1 (Solyc06g068870.3)
-1.57 -2.0 -3.48 -3.82 -0.94 -0.1 0.18 -0.74 -0.4 0.06 0.03 0.09 0.89 0.76 -1.09 -1.8 -1.34 -11.53 -8.75 -0.0 0.01 0.8 0.15 0.36 0.53 0.61 1.1 0.74 0.62 1.05 1.08 1.22 -2.09 -1.73
Solyc06g071180.3.1 (Solyc06g071180.3)
-0.01 -2.0 -2.58 -3.3 -1.49 -0.69 0.17 -1.16 0.02 -0.32 -0.04 0.6 -0.29 -1.02 -1.01 -1.55 -0.73 - - 0.82 0.44 0.68 -0.2 0.29 0.37 1.22 0.95 0.94 0.77 1.0 0.83 1.13 -1.87 -0.57
Solyc06g072840.3.1 (Solyc06g072840.3)
-3.14 -4.95 -8.37 -3.72 -4.41 -4.56 -10.93 -4.98 -1.8 -1.67 -6.15 -4.87 -6.98 -6.82 -3.47 -2.79 -3.13 - -12.94 0.67 0.03 0.53 1.11 1.04 1.98 0.52 1.52 2.28 2.66 0.91 -0.05 0.92 -5.11 -2.55
Solyc06g074710.1.1 (Solyc06g074710.1)
-0.92 -7.9 -0.25 -1.79 -6.97 -6.12 - -9.73 -1.97 -2.89 -12.24 -9.54 -7.89 -4.37 -5.25 -6.53 -3.29 -10.5 -13.97 -0.38 -2.32 1.8 0.46 1.0 2.17 -0.82 1.09 1.54 1.89 1.57 1.3 2.15 -10.17 -1.99
Solyc07g041245.1.1 (Solyc07g041245.1)
-1.48 0.4 -0.84 -0.13 -1.26 -1.03 -0.96 0.06 -0.72 0.12 -1.09 -1.9 -0.37 -1.41 -0.8 -1.29 -1.52 -3.38 -2.98 -1.87 -0.9 1.56 0.16 0.65 1.03 -2.24 0.21 0.75 1.02 1.33 1.47 1.42 0.47 -1.65
Solyc07g062530.3.1 (Solyc07g062530.3)
-5.72 -10.68 -6.71 -8.51 -5.44 -7.66 -7.26 -9.67 -4.69 -3.77 -6.27 -7.06 -3.23 -4.2 -5.54 -5.82 -5.47 -6.53 -7.13 0.2 1.47 1.28 -0.87 1.1 1.56 -1.22 1.34 2.29 2.23 1.71 1.19 1.8 -11.96 -5.6
Solyc07g065220.2.1 (Solyc07g065220.2)
0.24 -3.83 -0.2 -2.51 -0.03 -0.36 -0.13 -1.84 -1.54 -1.39 -0.42 -1.24 0.39 -0.07 -1.82 -2.45 -1.72 - -12.35 0.04 0.61 0.97 -0.45 0.34 0.31 0.23 1.13 1.07 0.64 1.45 1.15 1.34 -2.61 0.5
Solyc08g016720.1.1 (Solyc08g016720.1)
-1.8 -7.55 -2.43 -2.14 -3.36 -1.53 -3.59 -4.27 -1.31 -0.74 0.23 0.28 -0.97 0.65 -1.83 -0.54 -0.3 -10.46 -7.49 -2.72 1.02 1.4 -0.97 0.73 1.12 -0.98 0.68 0.83 0.9 1.52 1.24 2.3 -4.97 -1.47
Solyc08g016770.3.1 (Solyc08g016770.3)
-8.07 -7.63 - - -5.58 -4.19 -8.52 -5.17 1.45 -1.25 - -8.71 -8.66 - - -6.32 - - - -4.89 -0.79 0.9 -1.35 -0.18 0.45 -3.26 2.99 2.15 2.78 1.41 1.26 0.31 - -
Solyc08g029050.3.1 (Solyc08g029050.3)
0.2 -2.22 0.93 0.3 0.35 -3.04 0.08 -1.8 -2.15 -0.65 -3.96 -4.21 -6.74 -5.9 -0.33 -0.75 -0.9 - - -0.35 0.65 1.07 -1.53 -0.03 0.97 -0.16 -0.74 0.58 1.43 1.19 0.79 2.27 -6.58 0.62
Solyc08g076310.3.1 (Solyc08g076310.3)
-0.32 -3.31 -0.43 -0.58 -1.42 -0.79 -2.2 -0.75 -1.69 -1.48 -1.54 -1.55 -0.13 -0.84 -1.63 -2.12 -2.19 - - -2.62 -1.59 1.34 0.4 0.52 0.51 -2.01 1.61 1.59 1.04 1.68 1.47 1.63 -2.16 0.54
Solyc08g076480.3.1 (Solyc08g076480.3)
-2.11 -1.93 -1.98 -2.75 -1.86 -0.43 -0.93 -0.39 0.25 0.24 -0.63 -0.67 -0.17 -0.63 0.14 -0.2 -0.25 -5.65 -5.31 -0.17 -0.01 0.7 0.25 0.83 0.96 -0.96 1.14 1.61 1.45 0.97 0.72 0.47 -0.68 -2.21
Solyc08g082370.1.1 (Solyc08g082370.1)
-0.67 -3.04 -0.68 -0.38 -1.73 -0.12 -6.04 -1.48 -1.99 -0.67 -0.99 -0.57 -2.66 -0.77 -0.73 -0.97 -1.04 -9.9 -7.84 -4.25 -1.3 1.12 0.02 0.28 0.38 -4.38 1.66 1.72 1.44 1.54 1.53 1.52 -1.18 0.43
Solyc09g018280.1.1 (Solyc09g018280.1)
-0.6 -3.62 -2.1 -2.98 -1.11 -2.47 -1.48 -3.21 -0.48 -1.11 -2.93 -0.97 -1.03 -0.38 -1.16 -1.51 -0.84 - - -0.19 -0.12 1.36 0.55 0.94 0.8 0.24 1.35 1.17 0.65 1.58 1.48 1.46 -6.77 0.83
Solyc10g007570.3.1 (Solyc10g007570.3)
-1.32 - -4.82 - -1.37 -1.08 - -3.42 -3.24 -1.71 -3.65 -6.44 -6.06 -8.78 0.49 0.19 0.59 -7.76 -8.64 -0.72 0.55 1.34 -0.77 0.8 1.52 -1.11 0.94 1.78 2.07 1.48 1.03 1.58 -4.29 -1.69
Solyc10g011730.3.1 (Solyc10g011730.3)
-1.62 -9.46 -0.39 0.84 -3.56 -1.93 -8.9 -0.68 -0.56 -2.54 -1.94 -1.55 -4.21 -2.94 -1.41 -2.18 -2.01 - - -3.87 -1.73 1.25 -1.03 0.25 0.63 -6.16 1.9 1.94 1.83 2.09 1.56 1.59 -1.88 -4.29
Solyc10g054010.1.1 (Solyc10g054010.1)
-2.22 -5.02 -5.61 -5.89 0.19 -1.4 -2.15 -2.78 0.8 0.21 -0.66 -0.64 -1.87 -1.29 -0.73 -0.8 -0.3 - - -3.3 -0.72 1.05 0.36 0.27 0.25 -2.04 1.06 1.55 1.54 1.58 1.17 1.91 -5.1 0.42
Solyc10g074790.2.1 (Solyc10g074790.2)
-1.81 -2.55 -2.26 -1.91 -2.46 -2.12 -1.77 -2.76 -1.27 -1.38 -1.71 -1.62 -1.68 -1.8 -2.52 -3.24 -2.15 -4.39 -5.01 -0.18 1.23 1.65 0.31 1.25 1.9 -0.22 0.47 1.36 1.33 1.51 1.13 1.57 -3.45 -1.13
Solyc10g085400.2.1 (Solyc10g085400.2)
0.38 -0.37 -1.67 -0.59 -0.58 -1.6 0.87 -2.09 0.14 -1.21 -2.39 -2.27 -0.58 -0.07 -1.64 -2.73 -2.45 - -10.59 -0.98 0.09 1.55 -0.3 0.68 1.41 -0.64 -0.71 0.5 0.97 1.35 1.08 1.85 -4.02 0.16
Solyc10g087010.2.1 (Solyc10g087010.2)
-2.52 - -3.67 - -5.67 -1.8 -6.87 -5.55 -1.08 -2.06 -8.52 -7.55 -3.77 -3.37 -2.06 -1.77 -0.97 - - 0.17 2.25 0.24 -1.44 0.19 0.2 1.24 1.79 2.55 2.36 0.96 0.09 0.89 -4.81 -4.73
Solyc12g005350.2.1 (Solyc12g005350.2)
-0.1 0.63 0.78 0.58 -1.93 -7.29 -0.63 -4.33 -0.25 -1.2 -1.13 -2.23 -4.11 -0.55 -3.43 -5.22 -4.58 - - 0.16 0.82 1.02 -0.7 0.41 0.97 -0.03 0.44 0.9 1.18 1.26 0.99 1.93 - 0.02
Solyc12g019700.1.1 (Solyc12g019700.1)
-5.26 -6.41 -4.33 -3.9 -5.96 -4.81 -2.42 -4.08 0.04 0.43 -0.26 -0.64 -1.93 -2.2 0.37 0.33 -0.42 -6.04 -6.5 -0.55 -0.35 1.37 1.14 1.13 1.02 -2.73 0.93 0.99 0.76 1.58 1.46 1.95 -7.1 -4.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.