Heatmap: Cluster_396 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc05g005190.3.1 (Solyc05g005190.3)
-0.8 -0.52 -0.03 1.11 -0.58 -0.54 0.55 -0.09 -0.35 -0.25 -0.81 -0.63 -0.76 -0.63 0.24 -0.23 -0.03 -0.62 -1.43 -1.45 -1.37 0.6 0.46 0.7 0.75 -1.36 0.54 0.55 0.54 0.62 0.57 0.62 -0.8 -0.18
Solyc06g005150.3.1 (Solyc06g005150.3)
0.53 0.97 1.12 1.27 -1.4 -1.16 1.25 -0.8 -0.44 -0.75 -0.38 0.12 0.17 0.36 -0.63 -1.22 -1.41 -4.68 -4.62 -0.68 -0.27 0.23 0.2 0.18 0.24 -0.96 0.46 0.34 0.39 0.29 0.23 0.24 -1.86 -0.55
Solyc06g005160.3.1 (Solyc06g005160.3)
0.81 0.29 0.97 0.55 -1.78 -0.82 1.28 -0.49 -0.73 -0.87 -0.79 0.46 -0.16 0.47 -1.12 -1.29 -1.54 -8.74 -9.57 -1.05 -0.81 0.3 0.97 0.54 0.19 -1.11 1.03 0.56 0.19 0.29 0.45 -0.22 -0.56 -0.14

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.