Heatmap: Cluster_350 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc10g017490.2.1 (Solyc10g017490.2)
-0.92 2.04 1.57 1.13 -0.63 -0.87 0.81 0.54 1.14 -4.86 -0.25 -1.35 1.77 1.74 -1.04 -2.82 -3.25 -4.13 -5.96 -4.68 -2.75 -0.76 -0.86 -1.38 -0.89 -4.17 0.35 -0.0 0.88 -0.91 -0.7 -0.76 -3.46 -0.85
Solyc10g017495.1.1 (Solyc10g017495.1)
-0.54 1.98 1.83 1.47 -1.24 -1.38 1.35 0.3 1.18 -3.47 -0.84 -3.25 1.82 1.32 -2.0 -1.0 -1.98 - - -3.29 -2.12 -1.84 -1.15 -1.22 -1.08 - 0.4 0.19 0.83 -2.02 -0.5 -0.82 -4.73 -0.6

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.