Heatmap: Cluster_33 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g009810.3.1 (Solyc01g009810.3)
2.48 -3.71 - - -4.57 0.62 - -3.48 -7.0 -0.5 - -2.54 -6.02 - 2.27 3.12 2.54 - - -5.86 -3.48 -7.83 - -4.85 -1.44 0.99 - -4.2 -0.68 -5.32 -6.56 -2.08 -6.31 1.55
Solyc01g080800.3.1 (Solyc01g080800.3)
-3.69 - - - -1.34 4.15 - 1.63 0.44 -0.07 -2.06 1.06 - - -3.78 -3.29 - - - - - -2.93 - -3.99 -5.7 - - - -4.29 - -6.0 -4.1 2.83 -1.19
Solyc01g091465.1.1 (Solyc01g091465.1)
0.17 -2.81 0.14 -3.51 -1.27 1.25 1.19 -0.4 0.93 -0.23 0.47 1.71 -2.12 -2.38 -1.43 - -3.48 - - -5.04 -2.97 0.77 1.23 0.29 -0.02 - 0.67 0.19 -0.03 0.88 1.47 0.09 -1.2 0.19
Solyc01g091490.3.1 (Solyc01g091490.3)
1.68 1.99 -1.65 -3.67 0.56 2.98 1.24 0.75 0.76 1.41 -0.81 0.66 -5.22 -4.0 -3.34 - - - - -4.49 -2.3 -5.06 -3.57 -4.49 -5.65 - -3.34 -3.78 -4.93 -2.62 -2.13 -1.82 0.02 1.99
Solyc01g105190.3.1 (Solyc01g105190.3)
3.52 -4.33 3.04 -0.02 -2.08 -0.45 -4.19 - -0.61 -4.44 - -4.34 -3.07 - -4.59 -2.32 -2.83 -4.18 - -2.79 - -4.73 -4.1 -3.53 -3.66 -1.44 -2.15 -3.39 -3.41 -2.23 -1.04 -1.53 -5.81 3.11
Solyc01g105225.1.1 (Solyc01g105225.1)
2.58 -3.38 2.19 0.18 -1.48 -0.67 -0.7 -2.42 0.56 0.73 -0.34 -1.34 -0.25 -1.1 -1.7 -1.32 -1.69 -7.59 - -0.79 -0.07 -1.07 -1.58 -1.83 -2.29 1.37 -0.6 -1.0 -1.65 -0.75 -0.36 -0.57 -5.37 2.28
Solyc02g062300.3.1 (Solyc02g062300.3)
2.14 - 1.11 -2.48 0.1 3.01 -2.33 - -2.29 0.77 0.14 -0.86 0.48 -1.0 -2.64 -2.95 -3.19 -1.43 -4.16 0.74 1.22 -1.4 -1.88 -1.6 -1.79 -3.46 -1.36 -1.68 -1.39 -2.57 -1.57 -1.34 - 2.1
Solyc02g064570.2.1 (Solyc02g064570.2)
0.56 - - - 2.22 3.4 - 0.11 1.76 -2.39 -1.28 - - - - - - - - -3.23 0.82 -3.35 -2.23 -1.72 -0.38 - - 0.58 1.14 0.7 -0.3 0.49 -3.44 0.49
Solyc02g067660.3.1 (Solyc02g067660.3)
2.17 -0.82 0.61 -1.13 -0.45 0.41 -0.3 -1.03 0.53 -0.6 0.59 1.89 -3.22 0.06 -1.24 -2.91 -2.4 - - -1.98 -0.01 -0.66 0.97 0.77 -0.93 -4.1 -3.23 -3.15 -2.42 -3.25 -1.39 -3.07 -1.3 2.77
Solyc02g069960.3.1 (Solyc02g069960.3)
4.58 - -3.85 - -1.41 -0.01 - -4.17 -3.11 -0.21 -4.3 -3.32 -3.87 - - - - -1.45 - -2.69 - - - -5.1 -4.32 1.29 -5.18 -4.85 -5.08 - - -4.34 - 2.05
Solyc02g076980.4.1 (Solyc02g076980.4)
2.31 - 1.3 - -0.13 3.17 - -1.21 -1.13 0.52 -2.7 -4.59 - - -4.3 -3.81 - - - -1.98 -2.08 -2.01 - -1.31 1.04 -5.43 - -1.43 0.19 -4.04 -3.12 0.64 0.5 2.62
Solyc02g077040.4.1 (Solyc02g077040.4)
2.21 - - - -2.67 3.1 - -3.26 -1.45 0.74 -4.2 -2.24 -4.36 -3.48 -4.86 -8.21 -5.99 - - 2.16 -0.03 -2.72 -4.25 -2.93 -0.74 2.86 -7.9 -3.29 -1.52 -3.51 -3.38 0.3 -1.7 1.13
Solyc03g093890.3.1 (Solyc03g093890.3)
3.87 -2.23 -1.19 -2.71 -3.13 0.78 -3.59 -2.82 -3.05 -1.2 -2.72 -1.22 -1.92 -2.74 -1.71 -2.78 -3.01 -5.4 -7.38 -0.3 -0.98 -4.01 -4.38 -3.97 -2.19 -2.53 -5.05 -3.44 -1.6 -5.01 -3.83 -1.88 -5.14 3.54
Solyc03g116690.3.1 (Solyc03g116690.3)
0.48 - -3.46 - -1.87 2.76 -4.61 -1.04 0.67 -1.15 -1.59 -0.88 -0.99 -0.56 -3.3 - -4.93 - - 1.87 1.39 -6.33 -0.4 -0.62 -1.02 0.45 0.11 -0.12 0.09 - -6.46 -3.77 2.77 0.2
Solyc04g058160.2.1 (Solyc04g058160.2)
0.25 -4.73 4.56 -2.61 -3.37 1.69 - -0.52 -3.6 -0.28 -7.94 -6.56 - - -3.3 - -4.78 - - -5.17 - - - -8.52 - -3.59 - -9.4 -7.11 - - -5.48 1.42 0.12
Solyc04g064870.3.1 (Solyc04g064870.3)
1.81 -0.54 -4.03 -2.23 -2.34 2.1 -7.79 1.83 0.5 1.22 -0.37 0.35 -4.64 -5.94 -2.21 -3.56 -2.2 -7.64 -7.64 0.61 -0.73 -2.96 -1.83 -1.66 -0.74 0.56 -5.31 -3.29 -0.61 -5.09 -3.31 -0.78 -0.06 2.95
Solyc04g077180.2.1 (Solyc04g077180.2)
0.57 -0.35 2.06 1.65 0.32 -1.1 -0.52 -1.59 0.04 1.28 -1.58 -2.6 0.6 -1.02 1.56 1.95 1.66 -0.66 -2.79 -3.56 -1.38 -3.45 -5.41 -4.34 -5.03 -4.18 -2.45 -2.32 -1.97 -3.13 -3.13 -2.5 -3.03 1.62
Solyc05g054820.1.1 (Solyc05g054820.1)
3.93 0.45 2.03 2.26 -4.47 -0.67 - -2.88 -3.66 -0.15 -7.42 - - - -0.66 0.24 -1.12 -5.06 - -6.36 -4.62 -2.47 -7.34 -0.64 -0.7 - - -5.15 -4.63 -6.08 -3.32 -5.78 -3.02 1.42
Solyc06g006057.1.1 (Solyc06g006057.1)
0.79 - - - -0.71 3.13 -0.97 2.51 -0.99 2.76 - - - - - - -1.13 - - - -1.19 -0.08 - 0.05 0.52 -0.33 - -3.03 - -1.39 -0.78 - 0.3 0.98
Solyc06g036330.1.1 (Solyc06g036330.1)
1.09 -1.95 -1.17 -1.74 -0.13 0.78 -1.19 -0.47 -0.08 -0.06 -0.13 0.39 0.38 0.02 -0.07 -0.18 -0.12 -5.94 -5.39 0.5 1.08 0.25 -0.07 0.12 0.03 -0.69 -0.13 0.07 0.2 0.23 0.25 0.42 -0.6 0.99
Solyc06g048870.2.1 (Solyc06g048870.2)
2.75 - - - - 2.56 -2.34 - - - -1.59 0.98 - - - - - - - - - - - -2.88 - - - 2.21 2.72 - -1.33 -1.68 - 2.77
Solyc06g060470.1.1 (Solyc06g060470.1)
2.44 - - - -2.5 0.11 - 1.02 3.81 -1.43 -0.54 1.39 -3.74 - -1.55 - - - - -1.6 -0.03 - -1.41 -3.53 -5.49 - - -6.09 - - - - -0.97 2.27
Solyc06g062420.3.1 (Solyc06g062420.3)
3.9 - -4.11 - -3.52 2.55 -5.9 -3.16 -3.7 2.48 - -2.54 -4.79 -6.4 -0.77 - -4.65 - - -0.54 -3.13 - - -5.09 -3.35 -0.2 - -5.8 -1.46 -5.11 -4.39 -2.66 -2.36 1.93
Solyc06g063345.1.1 (Solyc06g063345.1)
1.14 1.32 1.27 1.34 0.24 -0.41 1.18 0.08 0.38 0.52 -1.12 -1.88 -0.16 -0.44 -0.18 -0.66 -0.98 0.28 0.89 -5.34 -3.42 -0.58 -0.08 -0.53 -1.49 -1.36 0.03 -0.49 -1.01 -0.68 -0.2 -2.1 -1.68 0.58
Solyc07g006090.2.1 (Solyc07g006090.2)
2.2 - - -0.47 -0.23 1.13 - 1.18 - 3.09 - - 0.45 - 1.76 - 0.89 - - -1.42 - - - - 0.04 - -1.98 -0.59 - - -1.86 0.47 - 2.09
Solyc07g006095.1.1 (Solyc07g006095.1)
1.58 - -0.8 - - 2.71 - 1.36 2.15 2.24 -0.03 -2.02 -1.05 -2.04 1.53 - -0.05 - - -1.85 - - - - -0.52 - - -1.42 - - - - -2.05 2.25
Solyc07g007220.3.1 (Solyc07g007220.3)
0.88 -2.37 0.87 -1.33 0.39 0.87 -0.57 0.0 0.77 0.34 0.86 1.49 0.54 1.35 0.4 0.21 0.85 -7.55 -7.38 -1.92 -0.29 -0.44 -0.59 -0.51 -1.26 -2.28 -0.99 -1.29 -1.53 -0.82 -0.05 -1.3 -1.88 0.81
Solyc07g045530.2.1 (Solyc07g045530.2)
1.15 -2.94 3.16 1.99 -0.93 1.92 -4.65 -2.33 -0.3 1.3 1.07 0.55 -1.15 -1.64 -2.49 -3.64 -3.21 - - -0.31 -0.52 -3.89 -4.3 -3.85 -2.29 -3.47 -3.1 -2.57 -1.44 -3.89 -3.66 -1.42 0.6 0.63
Solyc07g049660.3.1 (Solyc07g049660.3)
2.56 - -4.29 -8.79 2.03 0.94 -3.17 -0.45 0.01 0.8 -2.75 -2.33 -5.16 -7.86 -0.43 -0.9 -1.36 -8.68 -6.17 -2.51 -0.99 -0.24 -2.81 -1.48 -1.19 -1.98 -1.92 -1.66 -0.75 -0.43 -0.51 0.53 -0.1 3.12
Solyc07g049670.3.1 (Solyc07g049670.3)
2.52 - -4.71 - 3.02 0.71 -2.95 -0.98 -0.05 -0.07 -2.39 -2.21 -5.43 -6.1 -1.51 -1.99 -2.28 - -7.89 -1.49 0.38 -0.57 -3.1 -2.02 -1.4 -2.49 -2.37 -1.94 -1.12 -0.94 -1.04 0.07 -1.0 2.99
Solyc07g052070.2.1 (Solyc07g052070.2)
-3.21 - -3.98 - 3.71 2.15 - - 2.79 2.11 - - - - - - - - - - - -4.15 -1.27 -1.71 -1.55 - -0.37 -0.07 0.02 -1.87 -4.04 -3.38 - -0.33
Solyc07g055380.2.1 (Solyc07g055380.2)
2.95 -2.5 1.58 -0.28 -1.28 2.76 -2.68 -1.45 2.48 1.67 - 0.21 - - - - - - - -3.51 - - - -4.61 - - - -2.91 - - - - -2.73 2.09
Solyc08g066270.2.1 (Solyc08g066270.2)
1.17 3.68 -1.26 2.67 0.06 -0.14 -0.63 -4.6 -4.05 -3.11 -1.95 -1.3 1.29 2.22 - - - - - - - - - - - -3.61 - -4.58 - - - - -5.93 0.48
Solyc08g067360.3.1 (Solyc08g067360.3)
3.4 -6.32 -4.01 - -5.2 2.77 - -4.36 -2.61 1.1 -4.88 1.95 -3.24 0.39 -2.08 - -2.97 - - 0.52 -2.01 -5.82 -6.73 -3.64 -3.6 - - -6.42 -3.94 -5.44 - -1.9 -5.95 2.64
Solyc08g077440.3.1 (Solyc08g077440.3)
0.79 -1.71 0.41 -0.6 1.39 1.36 -0.84 0.36 -0.5 -0.17 -0.01 1.94 0.47 0.31 -0.11 -0.09 -0.05 -4.01 -5.66 0.39 0.36 -1.2 -1.12 -1.02 -1.18 0.49 -1.11 -0.94 -1.04 -1.18 -1.1 -0.96 -1.92 1.03
Solyc08g077740.1.1 (Solyc08g077740.1)
3.25 -2.27 -1.3 -1.31 -2.18 0.42 -0.17 -2.13 -0.87 -0.23 -0.45 -0.31 0.56 -0.06 -3.0 -2.11 -2.21 - - -1.94 -1.14 -0.51 -1.54 -0.98 -0.99 -1.24 -1.1 -0.7 0.03 -0.65 0.06 1.1 -3.56 2.5
Solyc08g078207.1.1 (Solyc08g078207.1)
2.68 -1.05 2.22 -1.61 -1.31 1.11 -1.49 -1.0 -1.11 0.53 -0.39 -1.63 -3.96 -5.94 -0.02 -1.86 -1.4 - - -2.09 0.52 -0.82 -1.36 -1.12 -0.81 -0.53 -0.74 -1.4 -0.91 -0.57 -0.81 0.29 -1.61 2.41
Solyc09g011260.2.1 (Solyc09g011260.2)
3.99 -4.0 - - - 0.52 -2.29 -2.82 -0.49 0.7 -0.15 0.75 -2.12 -1.35 0.84 - -2.36 -1.28 -1.23 1.12 -2.13 -0.83 -1.62 -1.3 -1.05 - -3.33 -3.47 -0.91 -4.31 -2.01 -1.23 -4.37 1.13
Solyc09g011330.2.1 (Solyc09g011330.2)
1.33 -2.22 1.15 0.39 1.03 1.35 0.11 1.35 -0.23 0.05 0.48 0.36 -0.02 0.44 -0.45 -1.06 0.01 - - -6.62 -6.56 -2.0 -0.46 -1.58 -2.49 -5.46 -0.22 -0.06 -0.12 -1.38 -1.03 -1.85 0.29 1.91
Solyc09g066155.1.1 (Solyc09g066155.1)
4.58 - - - - 1.53 - - - - - -0.53 - - - - - - - - - - - -2.81 -2.12 -0.02 - -1.48 0.21 - - -0.6 - 1.6
Solyc09g074490.3.1 (Solyc09g074490.3)
-1.46 - - -0.61 - 0.23 - - 3.91 2.32 - -0.62 - 1.67 - - - - - - - -0.47 -0.72 1.39 -1.58 - 0.44 -0.26 0.1 - - -1.35 - -
Solyc09g083060.3.1 (Solyc09g083060.3)
1.5 -6.25 -4.1 -6.03 0.32 1.77 -3.78 0.21 0.04 0.05 0.05 -0.24 -3.64 -3.87 0.45 1.11 0.48 - - 0.89 0.37 -1.08 -0.41 -0.46 -0.33 2.23 -1.99 -1.22 -0.69 -1.31 -1.38 -0.6 -0.66 1.17
Solyc09g083200.3.1 (Solyc09g083200.3)
1.42 -0.56 0.01 0.07 -1.08 -0.39 1.24 -0.94 -1.35 -0.39 -0.55 -0.79 0.15 0.1 0.04 0.64 0.13 -10.01 -10.95 -0.64 0.69 0.1 -0.66 -0.48 -0.87 -0.5 -1.01 -0.77 -0.63 0.07 0.5 0.35 -4.36 2.24
Solyc10g006950.1.1 (Solyc10g006950.1)
0.13 -1.22 -1.14 -1.39 -1.58 -0.78 0.24 -0.51 -0.24 -0.13 0.27 0.88 0.72 -0.36 0.21 -0.04 -0.27 -6.44 -8.88 1.14 -0.45 0.09 0.1 0.14 0.09 1.06 0.4 0.19 0.09 0.45 0.28 0.08 -0.45 0.49
Solyc10g007580.1.1 (Solyc10g007580.1)
2.74 - -0.2 0.03 - 1.71 - - 1.59 0.59 - -1.43 - - - - 0.04 - - -0.3 - - - - - 1.07 - - -1.65 - - 0.23 -0.13 3.45
Solyc10g008080.2.1 (Solyc10g008080.2)
3.81 -3.8 -0.16 -3.32 - 1.02 - - -3.53 -0.67 - -0.02 - - -0.09 - -0.17 - -4.41 0.81 - - - -4.9 -3.22 - - - -3.23 - - - -3.34 3.48
Solyc10g011810.3.1 (Solyc10g011810.3)
1.74 -0.17 2.14 1.21 0.4 1.24 -0.72 1.79 -0.48 -0.46 -0.66 0.41 -2.54 -0.91 -0.43 -1.54 -0.93 -6.7 -6.98 -1.34 -0.83 -2.15 -1.82 -1.9 -2.22 -3.39 -1.01 -1.5 -1.49 -1.52 -1.22 -2.03 1.13 1.62
Solyc10g079950.2.1 (Solyc10g079950.2)
0.86 -0.76 -0.75 -0.26 -0.27 0.06 -1.16 -1.97 -0.69 0.44 0.23 1.51 1.48 1.63 -0.0 -0.25 -0.14 -4.78 -4.0 0.06 0.91 -1.43 -1.66 -1.61 -1.6 0.06 -1.14 -0.43 0.35 -1.52 -1.47 -0.81 -2.29 1.85
Solyc11g013250.1.1 (Solyc11g013250.1)
3.95 1.56 0.36 -2.28 - -0.17 -2.43 - -1.43 - 0.17 1.14 -3.72 - - - - - - -4.42 - -4.39 -2.04 - - - - - -3.62 - -3.39 - -3.97 3.13
Solyc11g044390.1.1 (Solyc11g044390.1)
4.25 - - - - 3.81 - - - - - - - - - - - - - - - - - - - - - - - - - - - -0.03
Solyc11g044400.1.1 (Solyc11g044400.1)
2.54 - - - 1.66 3.54 - - - 3.62 - - - - - - - - - - - - - -1.24 - - - - -0.55 - - - - -
Solyc12g017960.1.1 (Solyc12g017960.1)
1.79 -7.46 2.55 -1.18 -1.64 0.62 -3.25 -0.15 0.12 1.52 0.8 -0.3 -3.39 -1.88 0.1 0.73 0.32 - - -4.31 -2.47 -1.9 -0.95 -1.37 -3.12 -6.99 -1.81 -1.7 -1.59 -2.51 -1.64 -2.71 0.66 2.55
Solyc12g036390.2.1 (Solyc12g036390.2)
3.09 -2.05 1.04 -2.51 -3.53 1.68 - -1.89 -2.42 0.99 -3.62 -1.64 -4.3 -5.68 0.51 0.39 1.61 -6.92 -8.32 -0.59 -3.95 -3.8 -3.93 -2.62 -3.0 -1.62 -4.38 -4.0 -2.5 -3.74 -3.14 -2.71 -3.44 3.14
Solyc12g087860.2.1 (Solyc12g087860.2)
3.36 - 3.69 0.65 -1.07 -0.64 -6.22 -2.5 -2.47 -0.18 -1.61 0.26 -1.13 -0.35 -3.59 -4.83 -4.25 -7.26 -5.79 -2.62 -3.8 -5.3 - -8.31 -8.37 - -7.61 -7.0 -5.13 -6.87 - -4.86 -3.32 1.79
Solyc12g087920.1.1 (Solyc12g087920.1)
- - - - -0.06 4.27 - 1.47 -0.24 - -0.2 - 0.77 -0.63 - - - - - - - - - -1.58 -3.44 - -3.07 - -1.77 - - - 1.64 1.56

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.