Heatmap: Cluster_501 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc02g067975.1.1 (Solyc02g067975.1)
-0.13 -1.47 -0.03 -0.35 0.81 0.03 0.13 -0.76 0.02 -0.43 -0.56 -0.65 -0.26 -0.36 -0.56 -0.38 -0.48 -0.09 1.05 -0.08 0.43 0.22 -0.39 -0.09 0.2 -0.2 -0.13 0.13 0.26 0.38 0.31 0.77 -1.81 0.78
Solyc02g067980.3.1 (Solyc02g067980.3)
0.08 -1.36 -0.23 -0.17 -0.04 -0.14 0.03 -0.61 0.03 0.23 -0.52 -0.69 -0.08 -0.51 -0.32 -0.23 -0.22 -0.07 1.35 -0.04 -0.26 0.25 -0.25 -0.04 0.05 0.13 0.0 0.12 0.19 0.35 0.27 0.63 -2.0 0.7

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.