Heatmap: Cluster_484 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc03g031820.3.1 (Solyc03g031820.3)
-0.53 0.04 -1.3 -1.21 -1.15 -0.6 0.76 -0.24 0.12 0.56 0.03 -0.48 0.43 0.11 0.47 0.5 0.36 1.54 -0.75 -0.87 -0.66 0.19 -0.24 -0.17 -0.21 -0.05 0.33 0.2 0.02 0.34 0.27 0.09 -2.59 -1.06
Solyc03g123890.3.1 (Solyc03g123890.3)
-1.52 -1.15 -1.84 -2.32 -0.43 -0.48 -0.03 -0.43 -0.63 0.41 -0.11 -1.34 0.92 0.23 1.06 0.62 0.57 2.62 0.1 -1.45 -0.33 -0.27 -0.58 -0.29 -0.39 -0.18 -0.2 -0.01 -0.08 -0.33 -0.33 -0.2 -4.21 -1.27
Solyc10g081410.2.1 (Solyc10g081410.2)
-0.29 -0.01 -0.46 0.35 -0.65 -0.42 0.62 -0.18 0.25 0.28 -0.25 -0.34 -0.39 -0.54 0.93 0.5 0.5 0.59 -0.58 -0.74 -0.66 -0.02 -0.2 -0.05 -0.05 0.63 -0.04 -0.0 -0.12 0.1 0.27 0.19 -1.34 -0.46

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.