Heatmap: Cluster_86 (HCCA)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Archegonia (mature)
Antheridia (9 DAI)
Antheridia (small, 11 DAI)
Antheridia (mature, 14-15 DAI)
Antheridia (japan)
Antheridia
Antheridia Reute
Antheridia Gransden
Sperm cell packages
Gametophore
Gametophore (dehydrated)
Gametophore (rehydrated)
Gametophore (hydroponic)
Gametophore+auxin (hydroponic)
Leaflets
Paraphysis
Sporophyte (9 DAF)
Sporophyte (16 DAF)
Sporophyte S1
Sporophyte S2
Sporophyte S3
Sporophyte S4
Sporophyte (10 DPC)
Spore capsule (green)
Spore capsule (green, reute)
Spore capsule (mature)
Spore capsule (mature, reute)
Spores (germinating, continous light)
Protoplast
Protonema
Protonema (liquid culture)
Protonema+aba
Protonema+gametophore
Protonema+gametophore (continous light)
Protonema+gametophore (heat stress)
Protonema+gametophore (high light)
Protonema+gametophore (low light)
Protonema+gametophore+acetone
Protonema+gametophore+gib.acid (continous light)
Protonema+gametophore+glucose (blue light)
Protonema+gametophore+glucose (darkness)
Protonema+gametophore+glucose (far red light)
Protonema+gametophore+glucose (red light)
Protonema+gametophore+glucose (uv-b light)
Protonema+gametophore+jasmonate
Protonema+gametophore+stringolactone
Protonema+glucose (continous light)
Chloronema
- 1.07 2.54 1.39 0.24 1.2 1.04 1.61 -4.37 0.31 -5.68 -3.54 -1.19 -2.83 -0.22 - 1.26 0.62 -0.33 0.85 0.07 0.27 -3.15 -2.32 0.12 -1.81 -1.75 1.27 -0.09 -0.54 0.35 -0.79 -0.32 0.53 -2.1 -0.19 0.09 -0.28 -1.59 -1.33 -3.06 -4.43 -1.19 -0.96 -1.16 -0.52 -1.1 -0.53
1.7 1.05 2.83 -1.25 2.33 1.17 1.6 1.08 2.18 -2.19 -1.95 -2.66 -2.45 -4.42 -2.77 3.11 -1.07 -7.12 -0.42 -2.32 -2.36 -2.79 -1.0 -7.29 -3.36 -4.14 -8.24 - -3.14 -1.99 -0.99 -1.66 -2.16 -3.21 - -5.88 -3.9 -0.74 -2.98 -0.97 - -4.72 0.05 -1.09 -1.48 -0.54 -0.6 -5.74
- 1.81 3.0 - - - - - 2.9 - - - - - - - 3.99 - - - - - - - - 3.71 - - - - - - - - - - - - - - - - - - - - - -
- - 3.81 - - - - - - - - - - - - 3.97 3.02 - - - - - - - - 3.35 - - - - - - - - - - - - - - - - - - - - - -
-0.27 1.62 2.11 -0.76 -1.58 1.86 1.66 1.2 0.46 -0.68 -0.94 -0.59 -0.61 -1.0 -1.38 1.93 0.36 0.79 -1.58 -0.42 0.26 -0.16 -4.24 0.93 0.11 1.1 1.38 -1.6 -1.12 -1.17 -1.79 -1.28 -1.83 -1.84 -2.26 -2.4 -1.36 -0.38 -2.89 -1.14 -2.14 -2.3 -1.31 -2.11 -2.11 -0.32 -2.23 -1.7
-1.29 0.65 2.81 -0.69 -2.95 0.21 -0.32 2.68 1.48 -0.09 -4.63 - -2.08 -1.65 -1.82 1.81 1.19 1.09 0.31 0.99 -0.53 0.09 1.15 -0.09 -1.57 -0.76 -1.15 -1.45 -0.81 -1.21 -2.41 -1.67 -3.44 -1.82 -2.52 -2.59 -2.7 0.69 -3.0 -3.45 -1.35 -3.63 -2.8 -3.8 -4.87 0.66 -2.11 -0.51
0.48 1.03 1.15 1.33 0.98 0.94 0.79 0.57 0.25 -0.16 -1.77 -1.41 -0.64 -2.14 -0.25 -0.55 0.88 0.6 0.38 0.45 0.67 0.19 -0.36 -1.13 -0.01 -0.53 -0.28 -0.18 -0.44 -0.25 -0.05 -0.42 -0.42 -0.28 -0.18 0.16 -0.32 -0.28 -1.3 -0.81 -1.56 -1.76 -0.72 -0.56 -0.96 -0.18 -0.45 -0.53
0.47 -0.29 3.28 -0.24 - 2.56 0.29 1.2 -1.16 -0.02 -1.43 2.56 - - -4.05 3.14 1.18 -0.33 - - - - - 0.36 - 1.47 - -1.27 - 0.27 - - - - -1.28 - - - - - - - - - - - - -3.43
- - 3.42 2.33 - - - - - - - - - - - 4.45 3.12 - - - - - - 0.74 - - - - - - - - - - - - - - - - - - - - - - - -
- - 3.61 3.61 1.35 - 1.58 2.54 - - - - - - - 3.04 - 0.74 - - - - - - - 0.42 - - -0.09 - - - - - - - - - - - - - - - - - - -
- - 3.97 - - - - - - - - - - - -2.44 - - 2.1 - - - - - 2.94 - 4.34 - - - - - - - - - - - - - - - - - - - - - -
0.88 0.29 2.49 -2.34 -1.78 0.37 -0.47 1.57 - 0.27 -3.45 - 0.03 -1.08 0.27 0.12 2.6 1.86 -1.6 0.25 -0.54 0.21 - -0.47 0.8 3.08 -0.06 -2.65 - -1.91 -1.25 -3.53 -3.22 -4.73 -2.56 - -3.1 -1.14 - -1.5 -2.0 -2.29 -2.15 -2.29 - -1.31 -3.31 -1.85
0.32 1.39 2.44 1.85 1.33 - - - 2.23 - - - - - -2.84 2.83 2.57 0.72 - - - - - - - 3.71 - - - - - - - - - - - - - - - - - - - - - -
- - 3.98 - - - - - - - - - - - -0.82 3.9 3.19 1.6 - - - - - - - 2.19 - - - - - - - - - - - - - - - - - - - - - -
- 0.78 2.73 1.62 -0.68 0.75 1.86 0.9 - -0.16 -2.18 -1.36 -1.97 -1.63 -1.81 2.38 1.17 -1.19 1.62 0.8 0.3 0.2 -0.53 -1.52 0.24 -0.99 1.54 -1.91 -2.83 -1.16 -2.76 -0.61 -4.12 - -4.43 -1.95 -3.56 -0.54 - -2.33 -1.42 -1.4 -2.67 -1.52 -4.49 -0.52 -2.05 -1.22
1.09 1.91 2.74 2.51 -0.84 1.15 0.62 1.59 -1.45 -1.14 -3.27 -1.39 -2.93 -1.68 -2.29 -0.77 0.66 0.28 -0.15 1.2 -1.29 -0.48 -0.86 -1.03 -0.09 -0.98 -0.73 -1.99 -3.82 -1.12 -1.67 -0.94 -2.32 -2.54 - -1.1 -2.71 0.12 0.13 -0.48 - -1.65 -1.32 0.24 -0.47 -0.44 -2.2 -0.84
- 1.98 3.09 -0.21 - - - - - -1.11 2.07 -0.04 -1.78 - -4.11 3.56 0.3 0.54 - - - 1.25 - - -0.85 -1.37 -0.74 0.38 2.2 -2.03 - - -1.79 -1.52 - - -0.77 - - - 0.04 - -1.47 -1.75 - -0.99 - -0.51
- - 3.82 - - 2.52 - 1.41 - - - - - - -4.32 4.48 - - - - - - - - - 1.66 - - - - - - - - - - - - - - - - - - - - - -
- 1.94 2.12 1.01 0.62 2.15 2.02 2.36 -1.62 -2.19 -0.31 0.73 -3.83 - -4.87 3.49 0.56 0.51 - -3.26 - 0.54 - -0.81 -0.35 -0.08 -2.55 - - -4.71 -2.52 -3.54 -2.16 -2.65 - -3.53 - -3.52 - -2.01 - - - - -2.3 -3.54 - -
- - 3.17 -2.04 -2.19 1.12 2.51 0.94 - - 1.47 2.2 - - - 3.87 0.08 - - - - - - 0.57 - 1.8 - - - - - - -3.09 - - - - - - - - - - - - - -0.74 -
- -1.21 3.04 2.3 2.44 - - 0.47 - - - - - - -3.01 4.14 2.06 -0.74 - - - - - - -0.05 1.54 -0.01 - - - - - - - - - - - - - - - - - - - - -2.33
- 2.83 2.91 -0.44 -1.0 -0.38 - - - - - - - - -4.89 4.4 0.51 0.06 - - - - - - -2.74 2.7 - - -1.99 -4.44 - - - -1.59 -3.16 - - - -2.27 -3.04 - - - - - - - -
- -2.81 2.35 -0.01 0.8 -0.07 2.85 2.08 0.18 -1.04 - -1.68 -1.41 -2.41 -1.46 3.08 1.98 0.6 - 0.68 -1.07 -0.76 -1.96 -0.21 -2.7 0.44 -0.71 - -2.41 -1.19 -2.0 -1.53 -4.86 -2.64 -1.41 0.02 -1.28 -0.59 -2.32 - - - - -3.28 - -0.87 - -2.33
- - 1.39 0.33 - 1.49 1.63 2.07 - 0.83 - - 0.48 2.01 -0.08 2.84 0.7 -2.83 -1.58 0.06 -2.5 -0.98 2.4 - 2.17 -0.39 -2.66 - -1.16 -4.05 -1.56 - -3.74 -1.02 - -2.63 - -2.64 - -2.33 -1.33 -0.2 -1.1 - - -2.83 - -1.54
- - 4.02 - - - - - - - - - - - - - 3.98 - - - - - - - - 4.0 - - - - - - - - - - - - - - - - - - - - - -
- - 4.49 1.4 - - - - - - - - - - - - 3.02 - - - - - - - - 3.88 - - - - - - - - - - - - - - - - - - - - - -
-6.45 0.21 1.92 0.19 -1.7 1.35 1.39 0.78 0.52 0.55 -0.44 -0.73 -0.01 -0.74 -0.36 1.64 1.02 1.25 0.5 0.8 0.58 0.15 -2.29 -0.44 -1.0 -0.51 -1.51 -1.46 -1.13 -0.54 -1.15 -0.25 -1.21 -0.12 -1.79 -1.39 -1.61 0.75 -1.65 -0.42 -1.82 -1.04 -0.53 -0.52 -1.9 0.13 -1.18 -1.19
-0.18 1.7 3.7 0.54 - - - - - - - - - - -6.09 4.42 2.27 - - - - - - -2.85 - 1.59 - - - -6.17 - - - - - - - - - - - - - - - - - -
- - 3.9 - - - - - - - - - - - - 5.05 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
- - 3.34 - - -0.12 0.36 1.08 -0.4 1.21 - - -2.19 -0.43 -1.88 2.54 -0.62 -0.87 - -1.62 0.29 - - - -0.19 -0.07 -0.62 1.93 -0.93 -0.47 1.28 -2.05 -1.68 0.14 -1.07 -1.89 0.41 - -1.2 -1.37 -1.38 - -1.45 -0.64 - 0.05 1.67 -0.86
- - 3.4 - -1.08 2.43 1.26 0.17 2.37 - - - - - -3.21 - 3.55 - - 1.15 - 0.13 - - - 1.33 -0.27 - - -3.55 - - - - - - 0.7 - - - - 0.36 0.51 - - - - -
-0.6 1.03 2.07 -2.29 -1.33 0.44 1.8 1.33 1.18 -1.63 -1.71 -2.15 -1.58 -1.21 -1.57 0.45 1.55 1.87 1.75 0.72 0.36 0.6 0.05 -0.62 1.18 1.77 1.86 -4.71 -5.35 -3.53 -4.78 -0.95 -5.45 - - -5.66 -5.48 -1.63 -4.7 -3.34 -3.56 -3.15 -2.81 -6.93 -4.79 -1.57 -3.71 -3.01
- - 3.18 1.81 - - - - - - - - - - - - 3.95 2.06 - - - - - - - 3.96 - - - -2.02 - - - - - - - - - - - - - - - - - -
- - 3.84 0.58 -1.59 - - - - - - - - - -4.64 4.48 2.42 -1.6 - - - - - - - 1.94 - - - - - - - - - - - - - - - - - - - - - -
0.84 1.24 3.07 2.7 -0.37 1.57 0.83 1.24 1.19 -0.48 - -1.12 -1.4 - -1.97 -0.41 0.11 -1.89 0.42 1.37 0.31 1.05 - - 0.29 -0.36 -0.87 -1.48 -2.64 -3.84 -2.47 -3.44 -2.52 -2.65 -3.6 -0.81 -3.15 -2.13 -1.75 -1.35 -2.92 -2.16 -0.64 -0.27 - -1.84 -3.22 -
- - 4.61 - - - - - - - - - - - - - - - - - - - - - - 4.56 - - - - - - - - - - - - - - - - - - - - - -
- - 3.83 - 2.03 - - - 1.26 - - - - - - 3.76 3.04 - - - - - - - -0.33 2.22 - - - - - - - - - - - - - - - - - - - - - -
0.0 0.83 3.4 2.47 0.75 1.44 1.53 1.67 -0.33 -3.62 - -5.96 -4.21 -6.34 -5.53 - 1.15 0.93 2.52 0.58 -0.57 -1.4 -0.12 -3.2 -2.05 -1.71 -4.55 -2.32 -4.56 -2.68 -3.91 -2.21 -3.92 -3.87 -5.82 -4.14 - -0.18 -4.18 -2.68 - -4.07 -3.17 -3.3 -4.47 -0.11 -1.53 -5.5
1.79 0.19 2.35 2.31 1.95 1.61 0.94 2.08 0.74 -1.79 -4.91 - -1.0 1.53 -2.37 3.01 1.1 -1.14 - -2.7 - -4.92 -0.8 -1.63 -4.1 0.08 - - - -2.96 -2.03 - -4.29 - - -5.06 - -3.95 - - -1.37 -1.24 -1.88 - -5.29 -3.05 - -3.94
- - 3.79 -0.89 -0.13 - - 0.72 -0.52 0.03 - - -0.05 - -1.03 1.98 - -0.32 - 0.52 -0.3 - - - -0.53 - - - - 0.29 -1.48 - - - - - -0.69 2.14 -0.07 1.97 - - 0.69 -0.12 1.35 1.39 -0.25 -2.06
- - 4.45 - - - - - - - - - - - - - 3.54 - - - - - - - - 3.56 - - 1.43 - - - - - - - - - - - - - - - - - - -
2.04 1.66 2.2 1.35 0.67 -1.13 0.38 -0.67 2.78 -3.93 -6.17 -5.94 -2.92 -3.93 -1.39 2.38 2.43 -0.65 -0.31 -0.06 -1.82 -3.22 -2.19 -0.03 -2.43 2.71 -3.51 -5.09 -4.01 -2.87 - -5.84 -5.23 -4.01 - -3.73 - -4.59 - -5.06 -5.82 -3.7 -6.97 -6.17 -6.52 -4.75 -7.29 -3.99
- 2.34 3.93 - - - - - -0.93 - - - - - -3.97 3.64 2.92 -1.04 - - - - - - - 2.71 - - - -3.96 - - - - - - - - - - - - - - - - - -
- 2.68 1.79 - -2.3 -1.25 -0.18 0.27 - 0.31 -1.93 -3.39 0.11 -0.14 -0.38 2.58 1.04 1.8 1.08 0.84 -0.31 -0.58 - 1.39 -0.5 -1.25 -2.66 -1.03 -1.99 -0.62 -1.7 -2.91 -2.15 -1.87 -4.03 -1.24 -2.8 0.37 -2.14 -0.24 -1.42 -1.34 -0.73 0.36 -1.27 -0.1 -0.59 -2.21
0.86 2.81 1.32 - -3.05 - - -0.61 - -2.9 1.58 1.84 - - -2.69 3.29 0.38 -0.65 - - - 0.03 0.96 2.42 -0.6 2.51 -0.59 - -0.3 -2.17 - -2.1 -2.95 - -2.28 - - - - - - - - - - - - -1.28
- 2.92 3.45 1.49 -0.34 - - - - - - - - - -2.36 - 2.67 1.06 - - - - - - - 4.11 - - - - - - - - - - - - - - - - - - - - - -
- - 4.27 1.65 - - - - - - - - - - - - 2.4 - - - - - - - - 4.34 - - - - - - - - - - - - - - - - - - - - - -
-2.91 3.01 3.22 -1.38 0.34 1.12 0.58 0.86 0.48 -2.39 -5.28 - -2.91 - -1.79 0.92 0.57 0.66 -3.16 -0.39 1.89 2.81 -1.12 0.17 0.89 -1.34 -3.39 - -5.83 -7.37 -3.46 -4.58 - - - - - -2.46 - -4.54 - - -3.47 -3.58 -4.47 -2.5 -4.21 -
- -0.79 1.15 0.33 -0.88 1.84 1.37 1.67 -3.01 -0.96 -2.32 -2.36 -1.76 -4.09 -1.09 2.52 1.87 0.33 -0.26 -0.08 -1.57 -0.71 2.45 1.09 2.43 -0.22 -1.33 -2.96 - -1.38 -1.19 -1.12 -2.23 -3.03 -2.97 -0.02 -1.93 -1.43 - -2.46 - - -3.11 -3.08 - -1.86 -2.6 -2.09
- - 1.95 - - 1.28 0.15 0.45 - -1.96 0.86 -0.55 -1.12 -1.63 -4.66 3.99 0.31 2.67 -1.66 1.11 -1.53 0.26 0.21 2.38 -1.92 -0.8 - - - -6.0 - - - - - - - - - -0.85 - - - -3.2 -3.16 -2.44 - -
- 2.02 1.64 1.01 -0.92 -0.59 -1.94 1.97 2.59 -3.62 - - -3.47 - -4.15 3.47 1.22 1.1 -0.32 - - - - 2.84 0.12 1.37 - - - - - - - - - - - - - - - - - - - - - -
- - 4.39 2.2 - - - - - - - - - - - 4.07 1.44 - - - - - - - - 1.53 - - - - - - - - - - - - - - - - - - - - - -
- 2.32 3.52 - - 2.8 2.3 3.5 - - - - - - - - - - - - - - - - - 3.05 - - - - - - - - - - - - - - - - - - - - - -
- 2.17 2.14 -2.6 - -1.6 - 0.52 - - - - -1.66 - -4.94 3.48 1.41 3.39 -2.11 0.23 -0.93 1.25 - 1.98 -0.15 0.77 - - - -5.21 - -1.85 -1.9 -1.94 -3.54 - - -3.36 - -2.85 - - -1.86 - -3.26 -3.36 - -
- - 3.62 - - - - - - - - - - - -4.59 3.7 3.57 1.95 - - - - - - -0.27 2.14 - - - - - - - - - - - - - 0.03 - - - - - -0.5 - -
- - 3.97 1.77 - - - - - - - - - - - 4.41 1.69 0.52 - - - - - - - 1.28 - - - - - - - - - - - - - - - - - - - - - -0.75
- -1.64 3.39 -1.07 - - - - -2.02 - - - - - - 4.73 2.78 -2.5 - - - - - - - 1.52 - - - - - - - - - - - - - - - - - - - - - -
- - 3.74 2.28 -0.77 - - 1.42 - - - - - - - 4.32 1.54 - - - - - - 0.69 - 1.07 - - - - - - - - - - - - - - - - - - - - - -
- 0.44 1.23 -0.65 0.3 1.56 2.07 1.09 0.68 -0.43 -2.36 - -2.81 -1.91 -1.4 3.29 2.06 0.93 - - - -2.36 - 3.08 - 1.04 - - - -2.13 - - - - -2.67 - - 0.07 - -2.59 -1.99 -1.33 -2.07 -2.77 - -1.23 - -2.32
0.28 0.44 2.12 1.94 0.8 0.54 0.23 1.02 -1.98 -0.37 -1.25 -1.64 -1.04 -1.93 -1.14 -0.01 0.4 1.04 1.22 0.4 0.51 0.19 -2.12 0.15 0.88 0.25 0.51 -0.72 -0.57 -1.21 -0.75 -0.63 -0.52 0.03 -1.23 -0.82 -0.41 -0.47 -1.27 -1.14 -1.58 -1.85 -1.4 -1.06 -1.14 -0.35 -1.27 -1.51
1.67 2.44 3.48 -0.28 -0.79 2.6 1.05 2.59 - - - - - - -3.64 3.19 0.72 -3.12 - - - -2.02 - - -0.41 -0.46 - - - - - - - - - - - - - - - - - - - - - -
- 0.79 3.32 0.22 3.06 - - - - - - - - - - 4.26 - - - - - - - - - 2.92 - - - - - - - - - - - - - - - - - - - - - -
- - 4.15 - - - - - - - - - - - -3.67 - 4.52 1.49 - - - - - - - 2.14 - - - - - - - - - - - - - - - - - - - - - -
- - 2.96 0.87 - - - - - - - - - - -5.66 3.76 2.09 0.86 - 1.42 - - - - 3.77 - 1.31 - - - - - - - - - - - - - - - - - - - - -
- - 2.96 0.87 - - - - - - - - - - -5.66 3.76 2.09 0.86 - 1.42 - - - - 3.77 - 1.31 - - - - - - - - - - - - - - - - - - - - -
- - 2.96 0.87 - - - - - - - - - - -5.66 3.76 2.09 0.86 - 1.42 - - - - 3.77 - 1.31 - - - - - - - - - - - - - - - - - - - - -
1.32 1.66 2.58 1.9 -1.75 2.16 1.72 2.21 -0.81 -2.36 -4.29 -4.59 -1.95 -4.14 -2.65 2.63 0.71 0.43 -0.04 0.29 -0.86 -0.82 -0.73 -2.72 -2.43 -0.53 -3.03 -1.31 -1.02 -2.89 -2.32 -2.49 -3.67 -2.31 -2.86 -3.07 -1.54 -2.08 -3.76 -1.81 -1.84 -1.83 -2.26 -4.13 -3.42 -1.83 -3.65 -2.19
- 0.61 3.23 0.7 - - - - 2.87 - - - - - - 2.23 2.97 -0.29 - - - - - -1.17 -1.09 3.8 - - - - - - - - - - - - - - - - - - - - - -
- -0.3 2.22 1.09 1.73 1.77 1.86 1.55 - - - - - - - 3.7 2.96 1.2 - - - - - - - 1.29 - - - - - - - - 0.68 - - - - - - - - - - - - -
- -0.0 3.32 0.31 1.89 1.91 0.84 1.84 -0.04 -0.66 - - -0.67 -4.11 -1.7 2.61 1.26 0.74 -2.14 1.16 0.57 -0.33 - -0.61 -0.25 -0.1 -1.83 -4.12 -4.81 -4.71 -2.01 - - - - - -3.23 -1.67 - -2.33 -2.3 -3.13 -3.12 -0.75 -4.63 -0.89 - -3.47
- - 3.72 - - - 3.22 3.29 - - - - - - - - 3.97 - - - - - - - - - - - - - - - - - - - - - - - - - - - - - - -
-0.95 1.55 3.02 0.85 1.29 - - - -0.77 - - - - - -4.99 3.28 3.26 0.16 - - - - - - - 3.46 - - - -3.06 - - - - - - - - - - - - - - - - - -
- - 3.2 1.05 0.85 - - - 0.02 - - - - - - 2.87 3.33 0.32 - -2.02 - - - 0.26 3.44 0.33 0.77 - - - - - - - - - - - - - - - - - - - - -
- - 2.65 -0.08 0.06 - - - - - - - - - -1.08 0.26 0.87 -1.31 - - - - 0.57 - 3.62 1.36 2.77 -0.19 1.56 0.02 - - -1.75 - - -1.26 - - - -0.59 1.63 - - -0.52 - - 1.12 -1.11

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.