Heatmap: Cluster_279 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g073830.1.1 (Solyc01g073830.1)
2.18 -3.16 2.44 3.8 -1.64 -4.11 -7.43 -5.36 -5.62 -3.04 0.3 2.14 -1.71 -3.95 -2.75 -4.73 -2.95 -6.34 - -3.68 -0.87 - - -5.19 -4.7 -3.92 -6.5 -4.95 -3.35 -6.92 -7.56 -2.41 -2.21 0.84
Solyc01g103580.3.1 (Solyc01g103580.3)
2.05 -4.46 1.66 1.93 -0.95 -0.06 -1.42 -1.33 0.15 -0.69 0.49 0.19 0.25 -0.5 0.39 0.3 0.79 -4.74 -5.76 -0.59 -0.37 -1.3 -1.51 -1.48 -2.0 -0.25 -1.74 -1.49 -1.42 -1.38 -1.26 -1.84 -2.1 2.04
Solyc01g108440.2.1 (Solyc01g108440.2)
1.9 -4.55 1.55 0.4 -3.05 -1.37 -2.53 -3.46 -0.02 -1.39 0.8 1.37 -0.4 -0.27 0.32 0.62 0.93 - - -1.3 0.3 -1.97 -0.9 -0.96 -1.5 -0.86 -0.58 -0.5 -0.77 -1.84 -1.72 -0.9 -3.92 2.64
Solyc02g065050.1.1 (Solyc02g065050.1)
1.53 -3.19 1.92 -1.44 -0.11 0.67 1.15 -0.91 0.72 -1.86 1.44 1.23 -1.49 -0.46 -2.04 -4.01 -4.27 -2.78 - -4.64 -1.89 -1.48 0.38 -0.11 -1.31 -3.08 0.48 -0.92 -2.27 -2.24 -0.57 -3.43 2.45 0.01
Solyc02g071220.3.1 (Solyc02g071220.3)
1.13 1.12 1.85 1.86 0.17 -0.98 -1.94 -1.35 -1.2 0.41 -0.7 0.31 0.42 0.4 0.06 0.7 0.71 -3.91 -4.0 -3.04 -3.78 -0.41 -0.18 -0.28 -1.06 -1.8 -0.79 -0.92 -0.99 -0.63 -0.85 -1.1 -1.27 1.22
Solyc02g079040.3.1 (Solyc02g079040.3)
0.49 0.3 -0.07 1.65 0.59 0.62 -1.19 -0.85 -0.24 -0.52 0.47 0.25 -0.11 0.35 -0.4 -0.07 1.08 -6.48 -7.25 0.32 0.57 -0.9 -0.48 -0.53 -1.1 0.58 -0.69 -0.76 -0.71 -0.96 -0.75 -0.25 -1.67 1.23
Solyc02g087210.3.1 (Solyc02g087210.3)
1.06 -0.98 1.77 0.66 -1.72 -1.17 -3.1 -3.13 -1.7 -2.69 -0.46 0.86 -0.59 1.53 -1.27 -0.44 -0.02 -0.49 -1.93 0.94 -1.33 -1.09 -1.06 -0.37 -2.0 -1.81 -1.26 -1.21 -1.52 -2.06 -1.66 -2.04 -2.4 3.17
Solyc02g092250.3.1 (Solyc02g092250.3)
2.61 -0.28 1.04 0.29 1.68 -0.43 -0.97 -2.67 -0.15 -1.18 0.2 0.11 0.16 0.11 -0.43 -0.41 -0.8 - - -2.38 -1.6 -1.87 -0.47 -0.43 -1.08 -4.02 -0.04 0.12 0.05 -1.19 -1.36 -1.95 -1.1 1.96
Solyc02g093230.3.1 (Solyc02g093230.3)
0.87 -3.75 4.4 0.83 -1.35 -0.86 -3.36 -1.17 -2.87 -2.73 -1.44 -1.45 -1.54 -0.94 -2.34 -2.95 0.18 -7.17 - -1.96 -3.37 -3.72 -3.19 -3.46 -3.9 -0.58 -1.91 -2.26 -2.44 -4.09 -3.3 -2.95 -2.05 0.86
Solyc03g007770.3.1 (Solyc03g007770.3)
0.82 - -1.47 -5.78 -4.65 -0.95 -2.47 -0.52 -2.16 1.09 0.08 0.02 2.37 0.62 -0.12 -0.25 0.27 - -12.56 0.28 0.22 -0.29 -1.36 -0.61 -0.3 0.42 -0.32 0.08 0.11 0.15 -0.27 0.56 -0.69 1.56
Solyc03g033540.3.1 (Solyc03g033540.3)
0.84 -1.5 0.78 -0.22 1.19 0.42 -0.44 -1.4 -0.11 0.1 -0.16 0.37 0.44 0.88 -0.58 -0.59 -0.25 -0.62 0.1 -0.34 0.55 -0.62 -0.11 -0.14 -0.45 -0.24 -0.68 -0.58 -0.46 -0.75 -0.7 -0.32 -1.83 1.39
Solyc03g044220.1.1 (Solyc03g044220.1)
0.72 -1.73 0.34 -0.2 1.21 0.37 -0.41 -0.91 -0.04 0.27 -0.1 0.33 -0.36 -0.86 0.85 0.89 0.74 -1.23 -0.89 -0.06 -0.0 -0.28 -0.42 -0.06 -0.31 -1.16 -1.16 -0.64 -0.54 -0.75 -0.63 -0.56 -0.17 1.44
Solyc03g095610.3.1 (Solyc03g095610.3)
2.04 -1.21 0.95 0.9 0.92 0.95 0.15 -0.63 0.12 -0.52 -1.72 -0.33 -1.42 -0.9 -1.01 -0.99 -1.29 - - -0.27 -0.14 -0.35 -1.32 -0.92 -0.42 -0.25 -0.62 -0.69 -0.79 -0.32 -0.52 0.27 -0.31 2.16
Solyc03g097340.1.1 (Solyc03g097340.1)
0.83 -1.71 0.07 -0.3 0.93 0.09 -0.18 -0.65 -0.26 0.21 -0.04 0.15 0.78 0.34 -0.46 -0.38 -0.4 -2.52 -2.7 0.17 -0.14 -0.27 -0.21 -0.31 -0.43 0.7 0.29 0.35 0.35 -0.09 0.02 -0.2 -0.17 0.64
Solyc03g097630.3.1 (Solyc03g097630.3)
0.85 -0.57 1.42 1.4 0.77 -0.23 0.61 -0.63 0.03 -0.25 -0.21 -0.56 -0.34 -0.66 -0.45 -0.24 -0.49 -4.44 -4.19 0.38 -0.47 -0.41 -0.05 -0.25 -0.58 -0.07 -0.21 -0.52 -0.79 -0.53 -0.46 -0.79 -2.23 1.9
Solyc04g025650.3.1 (Solyc04g025650.3)
1.8 0.97 2.23 1.28 0.8 -0.07 -0.11 -0.93 -0.35 -2.73 -0.02 1.26 -3.7 -0.57 -2.99 -5.11 -4.39 -8.15 -9.74 -1.67 -0.5 -3.57 -2.6 -3.28 -4.28 -0.98 -2.11 -2.1 -2.35 -3.79 -2.22 -4.06 -1.29 3.12
Solyc04g039990.3.1 (Solyc04g039990.3)
0.88 -0.82 1.51 0.35 0.14 0.8 -0.63 -0.06 -0.79 0.93 0.25 -0.01 0.29 -0.13 0.16 0.19 0.01 - -9.74 -0.0 0.75 -0.56 -0.26 0.2 -0.1 -0.54 -1.03 -0.48 -0.61 -0.84 -0.84 -0.53 -0.73 0.76
Solyc04g064740.3.1 (Solyc04g064740.3)
1.35 0.29 2.77 1.95 1.31 0.69 1.44 -0.01 0.2 0.56 -2.81 -3.76 -3.78 -5.46 0.17 0.15 -0.19 - - -5.07 -2.55 -4.5 -4.14 -4.4 -5.31 -3.53 -5.07 -5.11 -4.19 -4.14 -4.62 -4.65 -0.6 2.12
Solyc04g078550.3.1 (Solyc04g078550.3)
1.66 -1.28 1.27 -0.22 1.13 -1.04 -0.72 -1.48 -0.38 -1.32 -0.05 0.94 0.25 1.21 -0.39 0.16 -0.23 -4.51 -9.94 0.64 -0.66 -1.06 -0.33 -0.63 -1.77 -0.01 -0.1 -0.41 -0.73 -0.88 -0.67 -1.38 -2.39 1.9
Solyc05g005150.1.1 (Solyc05g005150.1)
1.42 -4.77 2.15 -1.23 -1.37 -0.79 -2.29 -2.62 -0.81 -1.59 1.23 1.82 1.14 2.4 -1.48 -0.64 -1.12 -7.08 -6.59 -2.16 -2.39 -2.22 -1.29 -2.04 -2.24 -2.82 -1.04 -1.72 -1.59 -2.05 -2.27 -1.59 -1.97 2.47
Solyc05g006510.1.1 (Solyc05g006510.1)
0.89 1.33 2.78 2.45 -0.34 -0.94 -0.29 0.03 0.06 -1.21 -0.86 -0.24 -0.8 -0.96 -0.23 -0.72 -1.22 -9.57 -10.65 -4.23 -3.73 -0.92 -0.47 -0.99 -1.52 -4.51 -0.77 -0.84 -1.62 -0.3 0.04 -1.91 -0.49 0.8
Solyc05g008070.3.1 (Solyc05g008070.3)
1.98 -2.31 1.89 0.18 0.18 1.27 0.07 0.77 -0.66 0.58 -0.34 -0.16 -1.73 -1.79 0.84 1.45 0.95 - - -1.4 -1.91 -2.66 -0.5 -0.36 -1.35 -2.17 -3.16 -3.46 -3.98 - -2.53 - -0.44 1.92
Solyc05g013880.1.1 (Solyc05g013880.1)
2.86 0.42 2.72 1.71 2.29 -0.52 -4.42 -0.77 -4.04 -4.52 - - - - -3.66 -5.87 -4.3 - -7.11 -7.87 - -5.07 -6.13 -5.08 -5.37 -5.2 -5.16 -5.19 -3.17 -4.62 -4.96 -4.24 -1.59 3.05
Solyc05g025820.3.1 (Solyc05g025820.3)
2.05 -3.51 3.61 1.27 1.37 0.93 -2.97 -1.87 -3.09 -0.43 -1.48 -0.11 -4.87 -5.21 -2.71 -2.92 -3.77 - - -4.04 -7.83 - -4.44 -5.12 -6.64 - -6.23 -4.92 -5.28 - - -3.27 -6.84 2.88
Solyc06g048820.1.1 (Solyc06g048820.1)
1.39 -1.88 2.24 -0.52 -2.24 0.72 -1.49 -0.86 0.41 1.41 0.58 0.88 0.49 0.34 0.0 0.24 0.76 - -12.92 -1.98 -0.23 -1.17 -1.11 -1.16 -1.33 -1.32 -1.45 -1.39 -1.01 -1.09 -1.26 -0.91 0.46 0.8
Solyc06g048935.1.1 (Solyc06g048935.1)
1.46 -0.3 0.62 1.49 -0.4 0.17 0.29 -0.03 -0.26 1.22 -0.39 0.11 -0.38 -1.1 0.48 0.25 0.18 - - 0.16 -1.24 -0.69 -1.65 -1.52 -1.59 2.07 -1.6 -1.17 -1.54 -1.68 -0.94 -0.55 -2.16 0.88
Solyc06g072460.1.1 (Solyc06g072460.1)
3.35 -3.81 0.6 -0.11 -2.25 -0.52 -2.06 -2.96 -2.83 -3.23 0.48 1.62 -3.53 -2.57 -4.59 -7.1 -5.76 - - 2.35 1.61 -3.96 -3.32 -2.93 -3.36 -0.99 -4.48 -4.28 -2.81 -5.35 -5.12 -2.88 0.87 1.87
Solyc08g066310.2.1 (Solyc08g066310.2)
1.9 - -0.34 -4.36 -0.29 1.18 -0.53 -1.14 -1.01 -0.51 0.69 -0.13 -4.87 -2.61 -5.54 -5.01 -4.42 - - 0.38 -0.18 -1.11 0.46 0.02 -0.48 -2.34 1.74 1.79 1.09 0.04 -0.63 -1.37 0.54 1.47
Solyc08g076490.2.1 (Solyc08g076490.2)
1.22 -1.49 3.15 1.72 -1.0 -0.74 -2.23 -1.14 0.93 -0.63 -0.08 0.56 -0.17 -0.26 -1.06 -1.05 -1.14 -5.72 -6.92 -0.3 -0.73 -1.07 -0.88 -1.06 -1.39 -0.86 -1.54 -1.44 -1.21 -1.05 -0.66 -0.68 -2.9 1.22
Solyc08g076493.1.1 (Solyc08g076493.1)
1.4 -0.88 3.29 1.53 -1.8 0.4 -1.89 -0.81 -0.32 -0.88 -0.99 -0.27 -1.76 -1.93 -1.82 -2.31 -1.68 - - -0.33 -1.47 -0.71 -0.77 -0.79 -0.68 -0.03 -1.49 -0.93 -0.63 -1.08 -0.83 -0.46 -0.55 1.65
Solyc08g076497.1.1 (Solyc08g076497.1)
0.96 -1.25 3.68 1.94 -2.23 -0.25 -3.15 -1.2 -0.87 -0.84 -0.76 -0.71 -2.08 -1.45 -1.8 -2.14 -1.82 - - -0.69 -0.78 -0.85 -0.74 -0.57 -0.62 -2.27 -1.73 -0.71 -0.73 -1.15 -1.32 -1.06 -0.82 1.22
Solyc09g005080.1.1 (Solyc09g005080.1)
1.53 -1.1 0.63 0.1 -0.84 -0.88 -1.64 -1.34 -1.6 -0.96 -0.21 -0.16 -1.42 -1.0 1.7 2.29 2.18 - -9.76 0.24 -0.52 -1.11 0.16 -0.56 -1.2 -0.37 -1.5 -1.6 -1.54 -1.36 -0.89 -0.79 -2.11 0.97
Solyc09g010850.3.1 (Solyc09g010850.3)
1.91 -0.75 0.64 -0.39 0.26 0.42 0.72 -1.29 -0.16 0.15 1.1 0.85 0.76 1.27 0.36 0.66 0.77 - - -0.25 -1.66 -1.66 -1.54 -1.86 -2.74 -0.45 -1.66 -2.06 -1.8 -1.57 -1.13 -0.97 -2.47 1.49
Solyc09g072810.3.1 (Solyc09g072810.3)
2.29 -2.78 -0.08 -2.19 -0.11 0.03 1.75 0.11 0.79 -0.51 -0.38 2.03 -3.22 -1.02 -0.76 -4.8 -3.19 - - -3.59 -0.56 -2.77 -1.03 -2.05 -2.64 -3.38 -3.61 -3.7 -1.73 -4.04 -2.03 -1.13 -1.35 3.21
Solyc10g009210.3.1 (Solyc10g009210.3)
0.1 0.44 -1.04 -0.73 0.29 0.44 -0.49 -0.27 -0.15 -0.46 0.73 0.82 1.4 1.54 -0.66 -0.95 -0.9 -2.74 -3.45 0.25 0.08 -0.33 0.11 -0.11 -0.52 0.02 -0.05 -0.16 -0.35 -0.31 0.05 -0.55 -1.1 0.54
Solyc10g052880.1.1 (Solyc10g052880.1)
1.02 2.28 1.07 1.63 -1.2 0.06 -2.83 -1.62 -1.0 -0.86 -0.35 1.15 0.42 1.27 -0.7 -0.97 0.2 -6.54 -9.59 -0.62 0.02 -1.91 -1.7 -1.5 -1.75 -0.89 -1.39 -1.7 -0.84 -2.02 -1.71 -1.57 -1.01 1.92
Solyc10g076500.2.1 (Solyc10g076500.2)
2.43 - - -3.13 -1.42 0.3 -3.36 -3.49 -0.86 1.11 -4.39 -1.29 - - - - - - - -3.87 -0.68 0.57 0.02 0.59 0.4 - 1.97 1.87 0.88 1.38 0.72 -1.89 -0.26 1.46
Solyc11g007660.1.1 (Solyc11g007660.1)
0.49 -1.78 -0.04 0.04 -0.01 0.27 -0.09 -1.06 -0.69 -0.12 0.39 0.78 1.19 1.23 0.23 0.45 0.51 -11.09 - -0.22 -0.29 -0.99 0.03 -0.41 -1.69 0.44 -0.44 -0.76 -0.99 -1.29 -0.66 -0.98 -1.09 2.01
Solyc11g020100.2.1 (Solyc11g020100.2)
1.69 2.43 0.58 1.51 1.5 0.75 -1.22 -2.01 -1.27 -0.46 -1.43 -2.1 -5.36 -6.46 -1.75 -1.82 -1.25 - - 0.12 -1.18 -0.42 -1.64 -0.16 0.17 -0.28 -0.39 0.12 0.02 -0.54 -0.79 -0.37 -3.32 1.41
Solyc11g069580.2.1 (Solyc11g069580.2)
1.03 1.38 -1.03 -0.16 1.86 0.91 1.32 0.55 -0.51 -0.72 -1.97 -1.73 -1.83 -2.11 -0.07 -0.5 -1.25 - - -2.72 -1.26 -0.67 -0.59 -0.84 -1.28 1.26 -1.92 -1.4 -1.27 -0.75 -0.63 0.3 0.4 1.98
Solyc11g071990.2.1 (Solyc11g071990.2)
2.88 -1.06 3.55 2.04 0.18 -2.29 -5.92 -3.58 -4.15 -7.64 -3.25 -0.53 -4.54 -6.03 -7.76 - - -7.33 -8.92 1.73 -5.62 -4.38 -3.84 -3.98 -5.65 -3.08 -5.07 -3.57 -4.42 -6.51 -4.46 -5.65 -3.95 2.0
Solyc12g100010.1.1 (Solyc12g100010.1)
3.46 0.64 2.23 -1.0 0.5 -0.02 -5.1 -3.13 -2.11 -3.57 -0.36 -1.03 -1.69 -1.88 -2.27 -3.04 -1.83 -6.92 - -3.86 -3.62 -5.75 -0.35 -2.31 -4.25 -2.8 1.49 -0.02 -0.71 -4.06 -5.15 -4.23 -2.01 2.26

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.