Heatmap: Cluster_447 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc01g079670.2.1 (Solyc01g079670.2)
2.88 -2.37 2.39 1.39 -1.96 -0.17 - -4.99 -0.61 -1.88 -2.99 -0.3 -2.37 -0.26 -4.41 - -4.78 - - -0.27 -3.3 -1.7 -0.01 0.15 -2.4 -3.41 -1.33 -2.25 -3.13 -3.8 -0.7 -3.75 -3.81 3.21
Solyc01g110890.1.1 (Solyc01g110890.1)
1.94 - 0.57 3.18 -1.13 -3.4 - - -3.09 - - - -3.88 -3.6 - - - - - -0.56 - -3.37 - - -3.66 - - -3.96 - - - - 0.62 4.03
Solyc06g082440.1.1 (Solyc06g082440.1)
1.83 -1.38 1.78 0.66 0.13 -0.46 -5.02 -1.96 -1.63 -0.58 -1.99 -0.7 -1.31 0.36 -1.09 -1.18 -0.26 -0.1 1.45 0.43 -0.83 -0.79 -0.85 -0.13 -0.74 -1.23 -2.03 -1.95 -1.85 -2.06 -1.8 -1.15 -1.21 2.76

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.