Heatmap: Cluster_520 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc11g066060.2.1 (Solyc11g066060.2)
0.04 0.12 -0.65 -0.43 0.52 -0.72 1.89 -0.64 0.41 -1.15 -0.87 -1.47 -0.62 -0.59 -1.01 -0.83 -1.38 -7.5 -8.35 0.07 0.48 0.48 1.35 1.03 0.47 -0.99 0.89 0.47 0.01 0.2 0.0 -0.55 -1.93 -0.03
Solyc12g015880.2.1 (Solyc12g015880.2)
-0.19 1.02 -0.87 -0.24 0.85 -0.54 1.79 -0.44 -0.34 -0.91 -0.36 -0.17 -0.52 0.07 -0.84 -0.92 -1.63 -7.65 -7.94 -1.34 -0.37 0.4 0.9 0.6 0.35 -1.33 1.05 0.59 0.35 0.43 0.03 -0.15 -1.68 -0.18

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.