Heatmap: Cluster_508 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc04g074340.3.1 (Solyc04g074340.3)
-2.44 -11.58 -0.43 -3.37 -4.23 -6.52 -11.14 -8.26 -2.39 0.06 -4.15 -8.72 -1.43 -4.38 2.34 3.49 3.15 -9.1 -9.9 -10.68 -5.22 -2.91 -3.25 -2.01 -3.38 -7.3 0.31 0.94 0.23 -1.77 -2.28 -2.26 -9.27 -1.7
Solyc10g049270.2.1 (Solyc10g049270.2)
-2.34 -0.8 -2.51 -1.48 -8.38 -2.91 -2.86 -5.7 -0.9 1.31 -4.65 -7.52 -1.34 -3.15 2.52 3.33 2.84 - - -3.59 -2.41 -3.09 -4.91 -3.56 -2.56 -1.72 -0.71 0.35 1.0 -1.48 -1.98 -1.41 -6.53 -5.2

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.