Heatmap: Cluster_473 (HCCA cluster)

View as: (view raw or row-normalized)

View using InCHLib : here ( Experimental feature, still under development)

(Values are log2 transformed ratios of a genes expression in a sample divided by the mean expression level)

Gene
Roots
Roots (Meristematic zone)
Roots (Differentiation zone)
Roots (Elongation zone)
Hypocotyl
Leaves
Meristem (Vegetative)
Apical Meristem
Floral Buds
Flowers
Ovary wall/pericarp (0-1 DPA)
Ovary wall/pericarp (2 & 5 DPA)
Ovule (0-1 DPA)
Ovule (2 & 5 DPA)
Style (1d before flowering)
Style (1d after flowering)
Style+pollen (1d after flowering)
Pollen (Germinated)
Pollen (Mature/Ungerminated)
Fruits (Breaker stage)
Fruits (Mature green)
Pericarp/Exocarp (4d Post Anthesis)
Pericarp (5d Post Anthesis)
Pericarp (7d Post Anthesis)
Pericarp (10d Post Anthesis)
Pericarp
Seeds (5d Post Anthesis)
Seeds (7d Post Anthesis)
Seeds (10d Post Anthesis)
Septum/Seed (4d Post Anthesis)
Septum (7d Post Anthesis)
Septum (10d Post Anthesis)
Seedling (Leaves)
Seedling (Roots)
Solyc09g056035.1.1 (Solyc09g056035.1)
-1.18 -3.15 - - 0.33 0.08 1.68 - 1.65 -1.52 -2.02 0.78 -0.21 -0.77 0.68 0.8 -0.37 -4.11 -4.22 -3.45 -1.8 0.61 1.4 0.78 0.26 -2.53 1.38 0.83 0.41 0.12 0.97 -1.35 - -
Solyc09g056040.3.1 (Solyc09g056040.3)
- -4.72 -3.22 - 1.04 -0.14 1.47 -2.41 0.55 -0.08 -0.81 -0.11 -0.35 0.62 0.89 0.59 0.6 -3.22 -3.87 -3.38 -2.42 0.44 1.23 0.73 -0.28 - 1.55 0.97 0.39 0.6 0.89 -0.71 - -6.23

Details

Dark gray cells indicate values where the raw expression is zero (cannot be log-transformed). Blue cells indicate samples where the expression of the gene is below average and red cells indicate the gene is expressed above average in the sample. White cells are average.